Wall clock time and date at job start Tue Mar 9 2021 13:12:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 H 1.09001 * 109.46918 * 274.15423 * 3 2 1 5 5 C 1.53001 * 109.47212 * 34.16118 * 3 2 1 6 6 C 1.52992 * 109.47014 * 179.97438 * 5 3 2 7 7 C 1.53007 * 109.47240 * 299.99713 * 6 5 3 8 8 H 1.09002 * 109.46977 * 300.00274 * 7 6 5 9 9 N 1.46497 * 109.47183 * 180.02562 * 7 6 5 10 10 C 1.34775 * 119.99982 * 85.00156 * 9 7 6 11 11 O 1.21593 * 120.00116 * 359.97438 * 10 9 7 12 12 C 1.47525 * 119.99869 * 179.97438 * 10 9 7 13 13 C 1.39781 * 120.06821 * 180.29018 * 12 10 9 14 14 C 1.37624 * 119.92679 * 180.21050 * 13 12 10 15 15 C 1.50707 * 119.96145 * 179.79205 * 14 13 12 16 16 O 1.42903 * 109.46442 * 104.72702 * 15 14 13 17 17 Si 1.86292 * 109.47319 * 344.72868 * 15 14 13 18 18 C 1.39191 * 120.07499 * 359.52176 * 14 13 12 19 19 N 1.39048 * 119.93655 * 180.25670 * 18 14 13 20 20 C 1.46901 * 111.00425 * 119.99685 * 19 18 14 21 21 C 1.46902 * 110.99685 * 243.95364 * 19 18 14 22 22 C 1.39238 * 120.13527 * 0.22809 * 18 14 13 23 23 C 1.37591 * 120.07265 * 0.02562 * 22 18 14 24 24 C 1.53001 * 109.46883 * 60.00206 * 7 6 5 25 25 C 1.53003 * 109.46571 * 154.15774 * 3 2 1 26 26 H 4.18747 * 15.03973 * 0.02562 * 4 2 1 27 27 H 1.09005 * 109.46829 * 299.99613 * 5 3 2 28 28 H 1.09002 * 109.47258 * 59.99608 * 5 3 2 29 29 H 1.09006 * 109.47294 * 179.97438 * 6 5 3 30 30 H 1.09002 * 109.47360 * 59.99753 * 6 5 3 31 31 H 0.97001 * 119.99782 * 265.00188 * 9 7 6 32 32 H 1.07998 * 120.03523 * 0.02562 * 13 12 10 33 33 H 1.08997 * 109.47199 * 224.72590 * 15 14 13 34 34 H 0.96700 * 114.00311 * 60.00230 * 16 15 14 35 35 H 1.48500 * 110.00207 * 299.99622 * 17 15 14 36 36 H 1.48510 * 110.00345 * 61.31497 * 17 15 14 37 37 H 1.08995 * 109.46818 * 59.99842 * 20 19 18 38 38 H 1.08991 * 109.46974 * 179.97438 * 20 19 18 39 39 H 1.09000 * 109.46947 * 300.00318 * 20 19 18 40 40 H 1.09002 * 109.47301 * 59.99711 * 21 19 18 41 41 H 1.09000 * 109.46698 * 180.02562 * 21 19 18 42 42 H 1.09003 * 109.46985 * 299.99107 * 21 19 18 43 43 H 1.08002 * 119.96733 * 180.02562 * 22 18 14 44 44 H 1.07999 * 120.03882 * 180.02562 * 23 22 18 45 45 H 1.08996 * 109.47080 * 59.99827 * 24 7 6 46 46 H 1.09005 * 109.46829 * 180.02562 * 24 7 6 47 47 H 1.08997 * 109.47047 * 60.00255 * 25 3 2 48 48 H 1.09001 * 109.47213 * 299.99469 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0094 -0.0736 1.0250 5 6 3.1566 -1.1927 -0.8100 6 6 4.6865 -1.1916 -0.8105 7 6 5.1954 0.1069 -1.4397 8 1 4.8317 0.1810 -2.4645 9 7 6.6604 0.1077 -1.4407 10 6 7.3339 -0.4903 -2.4433 11 8 6.7256 -1.0309 -3.3468 12 6 8.8091 -0.4890 -2.4446 13 6 9.5091 -1.1035 -3.4869 14 6 10.8853 -1.1044 -3.4830 15 6 11.6407 -1.7708 -4.6039 16 8 12.1784 -0.7734 -5.4747 17 14 10.4850 -2.8740 -5.5619 18 6 11.5803 -0.4856 -2.4478 19 7 12.9707 -0.4836 -2.4495 20 6 13.4953 0.8884 -2.4695 21 6 13.4996 -1.2327 -1.3018 22 6 10.8859 0.1319 -1.4108 23 6 9.5100 0.1317 -1.4062 24 6 4.6849 1.3003 -0.6297 25 6 3.1553 1.2992 -0.6288 26 1 -1.0501 -0.0005 0.0000 27 1 2.7937 -2.1178 -0.3620 28 1 2.7932 -1.1184 -1.8350 29 1 5.0503 -2.0421 -1.3872 30 1 5.0503 -1.2658 0.2143 31 1 7.1456 0.5386 -0.7197 32 1 8.9705 -1.5797 -4.2928 33 1 12.4532 -2.3679 -4.1899 34 1 12.7902 -0.1620 -5.0422 35 1 9.9191 -3.9156 -4.6675 36 1 9.3901 -2.0670 -6.1582 37 1 13.1461 1.4238 -1.5866 38 1 14.5848 0.8609 -2.4700 39 1 13.1439 1.3986 -3.3664 40 1 13.1515 -2.2645 -1.3498 41 1 14.5892 -1.2148 -1.3272 42 1 13.1506 -0.7741 -0.3766 43 1 11.4279 0.6116 -0.6092 44 1 8.9720 0.6112 -0.6018 45 1 5.0486 1.2261 0.3952 46 1 5.0471 2.2255 -1.0781 47 1 2.7916 2.1494 -0.0518 48 1 2.7920 1.3735 -1.6538 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_13422196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:04 Heat of formation + Delta-G solvation = 17.060858 kcal Electronic energy + Delta-G solvation = -28071.443670 eV Core-core repulsion = 24287.037624 eV Total energy + Delta-G solvation = -3784.406046 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.82518 -40.85564 -39.41926 -37.69865 -37.26074 -35.92062 -33.71349 -32.74702 -31.94864 -31.52076 -29.90552 -28.79531 -26.93562 -26.25098 -24.26372 -23.85344 -23.13869 -22.83185 -21.41515 -20.92221 -19.15587 -19.05176 -18.12148 -17.85796 -17.51501 -16.79229 -16.45448 -16.21101 -16.04762 -15.91208 -15.67533 -15.47680 -15.28813 -15.06598 -14.95561 -14.69703 -14.20154 -14.07356 -13.95306 -13.74871 -13.63694 -13.34729 -13.18141 -13.14906 -12.88005 -12.78808 -12.73964 -12.37027 -12.26178 -12.00705 -11.95113 -11.68822 -11.29636 -11.07694 -10.97887 -10.92106 -10.81734 -10.19339 -10.15171 -9.86405 -9.77374 -4.72540 -0.44138 0.07752 1.48981 1.66236 1.79692 1.91619 1.93994 1.99671 2.12323 2.57362 2.61285 3.31980 3.43150 3.52037 3.58002 3.63708 3.66311 3.84716 3.95017 4.00727 4.05032 4.06479 4.11015 4.13980 4.14878 4.30089 4.31359 4.33858 4.34438 4.36042 4.39306 4.55932 4.59698 4.62918 4.67998 4.73069 4.74887 4.89765 4.94544 4.96665 5.01506 5.05612 5.07224 5.15078 5.16287 5.22076 5.29711 5.39932 5.46774 5.56579 6.07513 6.38561 6.69414 6.73135 7.13281 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.108 4.108 6 C -0.129 4.129 7 C 0.143 3.857 8 H 0.093 0.907 9 N -0.722 5.722 10 C 0.560 3.440 11 O -0.531 6.531 12 C -0.133 4.133 13 C -0.055 4.055 14 C -0.097 4.097 15 C -0.066 4.066 16 O -0.533 6.533 17 Si 0.734 3.266 18 C 0.126 3.874 19 N -0.516 5.516 20 C 0.023 3.977 21 C 0.026 3.974 22 C -0.153 4.153 23 C -0.072 4.072 24 C -0.126 4.126 25 C -0.107 4.107 26 H 0.217 0.783 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.073 0.927 30 H 0.068 0.932 31 H 0.399 0.601 32 H 0.140 0.860 33 H 0.081 0.919 34 H 0.365 0.635 35 H -0.249 1.249 36 H -0.249 1.249 37 H 0.035 0.965 38 H 0.080 0.920 39 H 0.074 0.926 40 H 0.073 0.927 41 H 0.080 0.920 42 H 0.034 0.966 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.072 0.928 46 H 0.075 0.925 47 H 0.074 0.926 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.776 1.777 4.549 6.173 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.146 4.146 6 C -0.168 4.168 7 C 0.039 3.961 8 H 0.111 0.889 9 N -0.374 5.374 10 C 0.347 3.653 11 O -0.408 6.408 12 C -0.136 4.136 13 C -0.074 4.074 14 C -0.098 4.098 15 C -0.175 4.175 16 O -0.338 6.338 17 Si 0.633 3.367 18 C 0.032 3.968 19 N -0.237 5.237 20 C -0.124 4.124 21 C -0.120 4.120 22 C -0.173 4.173 23 C -0.091 4.091 24 C -0.164 4.164 25 C -0.145 4.145 26 H 0.234 0.766 27 H 0.090 0.910 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.086 0.914 31 H 0.235 0.765 32 H 0.157 0.843 33 H 0.099 0.901 34 H 0.213 0.787 35 H -0.173 1.173 36 H -0.174 1.174 37 H 0.054 0.946 38 H 0.099 0.901 39 H 0.093 0.907 40 H 0.091 0.909 41 H 0.098 0.902 42 H 0.053 0.947 43 H 0.149 0.851 44 H 0.147 0.853 45 H 0.091 0.909 46 H 0.094 0.906 47 H 0.093 0.907 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 2.347 0.560 2.962 3.820 hybrid contribution 0.106 1.753 2.707 3.227 sum 2.453 2.313 5.669 6.596 Atomic orbital electron populations 1.24985 0.96008 1.00233 1.00703 1.22982 0.94217 1.00820 1.00646 1.18367 0.84526 0.96068 1.00838 0.88931 1.21515 0.94679 0.97499 1.00882 1.21938 0.95326 0.98023 1.01496 1.21086 0.78548 0.95091 1.01376 0.88922 1.45972 1.07394 1.58012 1.26013 1.18158 0.86979 0.78312 0.81827 1.90820 1.69727 1.44214 1.35999 1.19906 0.92975 1.03386 0.97334 1.21121 0.93130 0.95945 0.97207 1.20280 0.93004 0.99642 0.96895 1.25129 1.03073 0.95394 0.93896 1.86718 1.64905 1.45298 1.36907 0.93342 0.77369 0.80128 0.85877 1.18819 0.89153 0.95768 0.93069 1.59460 1.04101 1.16044 1.44060 1.22554 1.01171 0.86942 1.01715 1.22502 1.01034 0.98586 0.89906 1.21602 0.94695 1.01528 0.99451 1.21154 0.94166 0.96859 0.96919 1.21813 0.96049 0.97849 1.00695 1.21487 0.94149 0.96753 1.02073 0.76591 0.90961 0.91058 0.90824 0.91377 0.76527 0.84256 0.90096 0.78708 1.17322 1.17358 0.94639 0.90078 0.90732 0.90864 0.90167 0.94711 0.85125 0.85254 0.90937 0.90619 0.90708 0.90969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.27 19.25 29.55 0.57 0.30 16 2 C -0.19 -0.34 12.56 -37.12 -0.47 -0.80 16 3 C 0.02 0.00 2.57 -93.40 -0.24 -0.24 16 4 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 5 C -0.11 -0.01 5.16 -26.73 -0.14 -0.15 16 6 C -0.13 0.00 5.49 -26.73 -0.15 -0.15 16 7 C 0.14 -0.01 2.45 -67.93 -0.17 -0.18 16 8 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 9 N -0.72 0.07 5.03 -54.85 -0.28 -0.20 16 10 C 0.56 1.88 7.73 -12.48 -0.10 1.78 16 11 O -0.53 -3.87 16.00 5.28 0.08 -3.78 16 12 C -0.13 -0.31 5.88 -104.94 -0.62 -0.93 16 13 C -0.06 -0.20 8.19 -39.23 -0.32 -0.53 16 14 C -0.10 -0.22 5.27 -104.49 -0.55 -0.77 16 15 C -0.07 -0.11 2.29 36.01 0.08 -0.02 16 16 O -0.53 -1.19 12.65 -35.23 -0.45 -1.64 16 17 Si 0.73 1.18 30.41 -169.99 -5.17 -3.99 16 18 C 0.13 0.07 4.66 -83.86 -0.39 -0.32 16 19 N -0.52 0.48 3.67 -186.87 -0.69 -0.20 16 20 C 0.02 -0.05 9.20 60.07 0.55 0.50 16 21 C 0.03 -0.05 9.38 60.07 0.56 0.51 16 22 C -0.15 0.08 8.53 -39.45 -0.34 -0.25 16 23 C -0.07 0.04 9.53 -39.23 -0.37 -0.34 16 24 C -0.13 0.27 5.39 -26.75 -0.14 0.12 16 25 C -0.11 0.12 5.16 -26.75 -0.14 -0.02 16 26 H 0.22 -0.34 7.80 -54.09 -0.42 -0.76 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 29 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.40 -1.18 6.62 -40.82 -0.27 -1.45 16 32 H 0.14 0.72 4.51 -52.49 -0.24 0.49 16 33 H 0.08 0.05 7.77 -51.93 -0.40 -0.36 16 34 H 0.37 0.08 8.06 45.56 0.37 0.45 16 35 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 36 H -0.25 -1.19 6.80 56.52 0.38 -0.81 16 37 H 0.03 -0.09 7.09 -51.93 -0.37 -0.46 16 38 H 0.08 -0.27 8.12 -51.93 -0.42 -0.69 16 39 H 0.07 -0.16 7.84 -51.93 -0.41 -0.57 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.08 -0.24 8.12 -51.93 -0.42 -0.66 16 42 H 0.03 -0.08 7.32 -51.93 -0.38 -0.46 16 43 H 0.13 -0.30 6.99 -52.49 -0.37 -0.67 16 44 H 0.13 -0.46 6.39 -52.49 -0.34 -0.80 16 45 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 47 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 48 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 385.98 15.07 5.82 5.82 Total: 0.00 -7.11 385.98 -10.54 -17.64 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -7.50 Total: -12.17 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -2.36 Total: -1.49 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.96 Total: -0.41 kcal Atomic # 8 Polarization: -5.06 SS G_CDS: -0.36 Total: -5.42 kcal Atomic # 14 Polarization: 1.18 SS G_CDS: -5.17 Total: -3.99 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -7.11 -10.54 -17.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_13422196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.705 kcal (2) G-P(sol) polarization free energy of solvation -7.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.644 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds