Wall clock time and date at job start Tue Mar 9 2021 13:12:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 H 1.09002 * 109.47120 * 153.54271 * 3 2 1 5 5 C 1.53005 * 109.47364 * 273.54189 * 3 2 1 6 6 C 1.52997 * 109.47452 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.46817 * 300.00239 * 6 5 3 8 8 H 1.08992 * 109.47063 * 299.99823 * 7 6 5 9 9 N 1.46499 * 109.46799 * 179.97438 * 7 6 5 10 10 C 1.34778 * 119.99771 * 85.00174 * 9 7 6 11 11 O 1.21279 * 120.00041 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99935 * 179.97438 * 10 9 7 13 13 O 1.42895 * 109.47270 * 179.97438 * 12 10 9 14 14 C 1.35899 * 117.00454 * 180.02562 * 13 12 10 15 15 C 1.38713 * 120.05967 * 179.72764 * 14 13 12 16 16 C 1.50696 * 120.02662 * 359.97438 * 15 14 13 17 17 O 1.42899 * 109.47353 * 284.99948 * 16 15 14 18 18 Si 1.86297 * 109.47119 * 164.99953 * 16 15 14 19 19 C 1.38170 * 119.94253 * 179.67850 * 15 14 13 20 20 C 1.38247 * 120.05416 * 0.61930 * 19 15 14 21 21 C 1.38284 * 120.11347 * 359.67548 * 20 19 15 22 22 C 1.38127 * 120.05578 * 0.02562 * 21 20 19 23 23 C 1.53000 * 109.47233 * 60.00194 * 7 6 5 24 24 C 1.52997 * 109.47060 * 299.99657 * 23 7 6 25 25 H 4.18735 * 15.03878 * 0.02562 * 4 2 1 26 26 H 1.09002 * 109.46935 * 59.99969 * 5 3 2 27 27 H 1.09001 * 109.46812 * 300.00311 * 5 3 2 28 28 H 1.08993 * 109.47194 * 179.97438 * 6 5 3 29 29 H 1.09002 * 109.46695 * 59.99734 * 6 5 3 30 30 H 0.97006 * 120.00568 * 264.99947 * 9 7 6 31 31 H 1.08995 * 109.47091 * 300.00103 * 12 10 9 32 32 H 1.08999 * 109.47030 * 59.99811 * 12 10 9 33 33 H 1.09005 * 109.47442 * 44.99952 * 16 15 14 34 34 H 0.96698 * 114.00583 * 179.97438 * 17 16 15 35 35 H 1.48505 * 109.99883 * 60.00087 * 18 16 15 36 36 H 1.48507 * 110.00137 * 181.31877 * 18 16 15 37 37 H 1.07993 * 119.96879 * 180.31576 * 19 15 14 38 38 H 1.08002 * 119.94143 * 179.70018 * 20 19 15 39 39 H 1.07992 * 119.97365 * 180.02562 * 21 20 19 40 40 H 1.08002 * 120.02748 * 180.02562 * 22 21 20 41 41 H 1.09002 * 109.47398 * 59.99826 * 23 7 6 42 42 H 1.09001 * 109.47194 * 180.02562 * 23 7 6 43 43 H 1.08996 * 109.47853 * 180.02562 * 24 23 7 44 44 H 1.09002 * 109.47153 * 300.00319 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 0.9209 -0.4579 5 6 3.1561 -0.0882 1.4398 6 6 4.6861 -0.0869 1.4398 7 6 5.1971 -1.2886 0.6425 8 1 4.8346 -2.2090 1.1002 9 7 6.6621 -1.2870 0.6421 10 6 7.3369 -1.8441 1.6672 11 8 6.7313 -2.3462 2.5902 12 6 8.8439 -1.8429 1.6665 13 8 9.3213 -2.4856 2.8502 14 6 10.6687 -2.5691 3.0063 15 6 11.2011 -3.1752 4.1347 16 6 10.2858 -3.7414 5.1895 17 8 9.7197 -2.6737 5.9520 18 14 11.2563 -4.8630 6.3168 19 6 12.5714 -3.2647 4.2879 20 6 13.4116 -2.7395 3.3238 21 6 12.8833 -2.1294 2.2009 22 6 11.5141 -2.0428 2.0401 23 6 4.6871 -1.1997 -0.7972 24 6 3.1571 -1.2010 -0.7973 25 1 -1.0499 -0.0006 0.0008 26 1 2.7932 -1.0084 1.8976 27 1 2.7923 0.7681 2.0076 28 1 5.0494 -0.1498 2.4655 29 1 5.0486 0.8335 0.9821 30 1 7.1465 -0.8851 -0.0960 31 1 9.2072 -2.3791 0.7898 32 1 9.2064 -0.8153 1.6400 33 1 9.4876 -4.3092 4.7112 34 1 9.1182 -2.9651 6.6508 35 1 12.3476 -4.1007 6.9751 36 1 10.3585 -5.4528 7.3423 37 1 12.9863 -3.7410 5.1638 38 1 14.4824 -2.8062 3.4477 39 1 13.5417 -1.7202 1.4490 40 1 11.1020 -1.5665 1.1628 41 1 5.0497 -0.2793 -1.2549 42 1 5.0508 -2.0561 -1.3651 43 1 2.7937 -1.1381 -1.8229 44 1 2.7946 -2.1214 -0.3395 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_2989392.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:28 Heat of formation + Delta-G solvation = -25.753014 kcal Electronic energy + Delta-G solvation = -25720.380431 eV Core-core repulsion = 21991.936793 eV Total energy + Delta-G solvation = -3728.443638 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.151 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.59998 -40.89115 -39.46980 -38.30288 -37.44531 -35.85881 -33.60503 -32.83015 -31.94779 -31.39050 -30.52593 -28.75662 -26.55564 -24.41841 -23.87152 -23.24434 -22.41551 -21.55326 -21.14262 -19.30157 -19.07705 -18.38289 -18.32865 -17.39893 -17.33806 -16.95737 -16.76840 -16.08933 -15.75386 -15.57137 -15.42055 -15.28517 -15.20074 -14.91914 -14.68400 -14.13224 -13.99889 -13.76839 -13.74142 -13.51305 -13.34460 -12.97057 -12.80617 -12.65830 -12.37396 -12.26517 -12.14679 -11.94325 -11.73184 -11.69117 -11.65346 -11.00305 -10.93145 -10.80835 -10.25869 -10.15403 -9.94054 -9.16374 -4.89045 0.26024 0.45819 1.38361 1.46593 1.51612 1.66536 1.91688 1.94869 2.01719 2.56626 2.69198 3.31708 3.46257 3.51498 3.58436 3.64038 3.76468 3.87491 3.91331 3.93464 4.00594 4.05371 4.13556 4.14271 4.28758 4.30821 4.33495 4.35737 4.36482 4.53476 4.59425 4.62674 4.67613 4.89337 4.95607 4.99776 5.01299 5.06957 5.15897 5.21157 5.28985 5.29372 5.38560 5.40281 5.53154 5.73188 6.25802 6.40387 6.64947 6.73226 7.11629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.108 4.108 6 C -0.130 4.130 7 C 0.146 3.854 8 H 0.092 0.908 9 N -0.725 5.725 10 C 0.517 3.483 11 O -0.510 6.510 12 C 0.039 3.961 13 O -0.279 6.279 14 C 0.151 3.849 15 C -0.100 4.100 16 C -0.066 4.066 17 O -0.530 6.530 18 Si 0.685 3.315 19 C -0.078 4.078 20 C -0.151 4.151 21 C -0.073 4.073 22 C -0.212 4.212 23 C -0.126 4.126 24 C -0.107 4.107 25 H 0.217 0.783 26 H 0.070 0.930 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.068 0.932 30 H 0.402 0.598 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.076 0.924 34 H 0.377 0.623 35 H -0.255 1.255 36 H -0.261 1.261 37 H 0.135 0.865 38 H 0.130 0.870 39 H 0.129 0.871 40 H 0.130 0.870 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.049 0.049 -5.832 6.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.146 4.146 6 C -0.169 4.169 7 C 0.042 3.958 8 H 0.110 0.890 9 N -0.379 5.379 10 C 0.301 3.699 11 O -0.383 6.383 12 C -0.040 4.040 13 O -0.191 6.191 14 C 0.105 3.895 15 C -0.101 4.101 16 C -0.176 4.176 17 O -0.337 6.337 18 Si 0.587 3.413 19 C -0.096 4.096 20 C -0.169 4.169 21 C -0.091 4.091 22 C -0.231 4.231 23 C -0.164 4.164 24 C -0.145 4.145 25 H 0.234 0.766 26 H 0.089 0.911 27 H 0.090 0.910 28 H 0.092 0.908 29 H 0.087 0.913 30 H 0.236 0.764 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.094 0.906 34 H 0.225 0.775 35 H -0.180 1.180 36 H -0.187 1.187 37 H 0.152 0.848 38 H 0.148 0.852 39 H 0.147 0.853 40 H 0.147 0.853 41 H 0.091 0.909 42 H 0.094 0.906 43 H 0.093 0.907 44 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 2.083 -0.216 -4.593 5.048 hybrid contribution -0.856 1.075 -0.113 1.379 sum 1.227 0.859 -4.706 4.939 Atomic orbital electron populations 1.24984 0.96015 1.00592 1.00349 1.22984 0.94226 1.00692 1.00768 1.18369 0.84515 0.99835 0.97096 0.88913 1.21517 0.94709 1.03329 0.95046 1.21942 0.95321 0.98145 1.01447 1.21062 0.78302 1.00048 0.96393 0.88982 1.45900 1.07406 1.60814 1.23774 1.20027 0.88720 0.78460 0.82650 1.90782 1.69706 1.43444 1.34363 1.22476 0.92888 0.99636 0.89028 1.86204 1.18849 1.73987 1.40081 1.18782 0.81914 0.94841 0.93982 1.18590 0.93213 1.04093 0.94226 1.24638 1.00666 0.95112 0.97156 1.86596 1.64733 1.32526 1.49879 0.95224 0.80849 0.83401 0.81872 1.20986 0.91562 0.97934 0.99088 1.21049 1.00144 1.00960 0.94767 1.21013 0.94234 0.96566 0.97292 1.21264 0.94605 1.06730 1.00485 1.21819 0.95995 1.03218 0.95335 1.21496 0.94178 0.98022 1.00801 0.76608 0.91076 0.90975 0.90801 0.91326 0.76416 0.88816 0.88893 0.90557 0.77493 1.18021 1.18655 0.84799 0.85235 0.85327 0.85255 0.90851 0.90587 0.90703 0.90990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.23 19.25 29.55 0.57 0.34 16 2 C -0.19 -0.28 12.56 -37.12 -0.47 -0.75 16 3 C 0.02 -0.01 2.56 -93.40 -0.24 -0.25 16 4 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 5 C -0.11 0.03 5.16 -26.73 -0.14 -0.10 16 6 C -0.13 0.08 5.49 -26.73 -0.15 -0.07 16 7 C 0.15 -0.15 2.45 -67.93 -0.17 -0.32 16 8 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 9 N -0.73 1.30 5.08 -53.81 -0.27 1.03 16 10 C 0.52 0.79 7.87 -10.98 -0.09 0.70 16 11 O -0.51 -3.27 16.16 -14.35 -0.23 -3.51 16 12 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 13 O -0.28 -1.04 9.00 -39.33 -0.35 -1.39 16 14 C 0.15 0.44 6.66 -39.21 -0.26 0.18 16 15 C -0.10 -0.31 5.31 -104.47 -0.55 -0.86 16 16 C -0.07 -0.18 2.37 36.00 0.09 -0.10 16 17 O -0.53 -2.28 12.86 -35.23 -0.45 -2.73 16 18 Si 0.69 0.41 30.19 -169.99 -5.13 -4.72 16 19 C -0.08 -0.12 8.66 -39.60 -0.34 -0.46 16 20 C -0.15 -0.05 10.04 -39.56 -0.40 -0.45 16 21 C -0.07 0.01 10.04 -39.61 -0.40 -0.39 16 22 C -0.21 -0.11 9.04 -39.43 -0.36 -0.46 16 23 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 24 C -0.11 0.18 5.16 -26.73 -0.14 0.04 16 25 H 0.22 -0.38 7.80 -54.09 -0.42 -0.80 16 26 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.40 -2.02 8.60 -40.82 -0.35 -2.37 16 31 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 32 H 0.09 -0.24 7.66 -51.93 -0.40 -0.64 16 33 H 0.08 0.21 7.83 -51.93 -0.41 -0.20 16 34 H 0.38 0.20 8.74 45.56 0.40 0.60 16 35 H -0.26 -0.73 6.76 56.52 0.38 -0.35 16 36 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 37 H 0.13 0.02 4.90 -52.49 -0.26 -0.24 16 38 H 0.13 -0.23 8.06 -52.49 -0.42 -0.66 16 39 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 40 H 0.13 -0.29 6.30 -52.49 -0.33 -0.62 16 41 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 43 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 LS Contribution 366.85 15.07 5.53 5.53 Total: 0.00 -9.96 366.85 -10.33 -20.29 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -6.43 Total: -11.95 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: -2.99 Total: -2.55 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.27 Total: 1.03 kcal Atomic # 8 Polarization: -6.59 SS G_CDS: -1.04 Total: -7.63 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -5.13 Total: -4.72 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -9.96 -10.33 -20.29 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_2989392.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.458 kcal (2) G-P(sol) polarization free energy of solvation -9.961 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.753 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds