Wall clock time and date at job start Tue Mar 9 2021 13:12:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 H 1.09003 * 109.47116 * 132.38596 * 3 2 1 5 5 C 1.52991 * 109.47400 * 252.38874 * 3 2 1 6 6 C 1.52999 * 109.47468 * 180.02562 * 5 3 2 7 7 C 1.53005 * 109.46963 * 299.99685 * 6 5 3 8 8 H 1.09003 * 109.47060 * 300.00029 * 7 6 5 9 9 N 1.46501 * 109.46814 * 179.97438 * 7 6 5 10 10 C 1.34774 * 119.99489 * 85.00851 * 9 7 6 11 11 O 1.21545 * 120.00596 * 359.97438 * 10 9 7 12 12 C 1.47849 * 119.99621 * 179.97438 * 10 9 7 13 13 C 1.39562 * 120.14696 * 179.97438 * 12 10 9 14 14 C 1.37969 * 119.85315 * 180.02562 * 13 12 10 15 15 C 1.50704 * 119.92428 * 179.97438 * 14 13 12 16 16 O 1.42892 * 109.47196 * 90.00443 * 15 14 13 17 17 C 1.35908 * 116.99907 * 180.02562 * 16 15 14 18 18 C 1.38706 * 120.05344 * 179.97438 * 17 16 15 19 19 C 1.38166 * 119.94172 * 180.02562 * 18 17 16 20 20 C 1.50701 * 119.97212 * 179.97438 * 19 18 17 21 21 O 1.42902 * 109.46980 * 299.99951 * 20 19 18 22 22 Si 1.86295 * 109.47294 * 180.02562 * 20 19 18 23 23 C 1.38243 * 120.05887 * 359.74301 * 19 18 17 24 24 C 1.38288 * 120.10724 * 0.51419 * 23 19 18 25 25 C 1.38126 * 120.05386 * 359.48327 * 24 23 19 26 26 C 1.38335 * 120.14998 * 0.25685 * 14 13 12 27 27 C 1.38382 * 120.28956 * 359.48965 * 26 14 13 28 28 C 1.37940 * 120.14481 * 0.51147 * 27 26 14 29 29 C 1.53001 * 109.47034 * 60.00163 * 7 6 5 30 30 C 1.52999 * 109.47099 * 12.38934 * 3 2 1 31 31 H 4.18741 * 15.03904 * 0.02562 * 4 2 1 32 32 H 1.09001 * 109.47062 * 300.00300 * 5 3 2 33 33 H 1.09003 * 109.47213 * 59.99782 * 5 3 2 34 34 H 1.09003 * 109.46975 * 180.02562 * 6 5 3 35 35 H 1.08989 * 109.47262 * 59.99683 * 6 5 3 36 36 H 0.96997 * 120.00139 * 264.99566 * 9 7 6 37 37 H 1.07999 * 120.06719 * 0.02562 * 13 12 10 38 38 H 1.08998 * 109.47297 * 329.99629 * 15 14 13 39 39 H 1.09009 * 109.46567 * 210.00128 * 15 14 13 40 40 H 1.08006 * 120.02974 * 359.97438 * 18 17 16 41 41 H 1.08997 * 109.47272 * 59.99834 * 20 19 18 42 42 H 0.96705 * 114.00195 * 299.99788 * 21 20 19 43 43 H 1.48497 * 110.00541 * 58.67787 * 22 20 19 44 44 H 1.48503 * 110.00248 * 180.02562 * 22 20 19 45 45 H 1.07993 * 119.94940 * 180.25047 * 23 19 18 46 46 H 1.08002 * 119.97454 * 179.76977 * 24 23 19 47 47 H 1.07999 * 120.02656 * 180.27809 * 25 24 23 48 48 H 1.08000 * 119.85715 * 179.72132 * 26 14 13 49 49 H 1.07997 * 119.92960 * 180.25853 * 27 26 14 50 50 H 1.08000 * 120.07735 * 179.72720 * 28 27 26 51 51 H 1.08997 * 109.46846 * 59.99488 * 29 7 6 52 52 H 1.08998 * 109.47304 * 180.02562 * 29 7 6 53 53 H 1.08998 * 109.47426 * 60.00260 * 30 3 2 54 54 H 1.08997 * 109.47524 * 299.99976 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0090 0.6936 -0.7591 5 6 3.1558 0.4373 1.3748 6 6 4.6858 0.4386 1.3746 7 6 5.1970 -0.9699 1.0649 8 1 4.8343 -1.6631 1.8239 9 7 6.6620 -0.9685 1.0642 10 6 7.3365 -1.1181 2.2213 11 8 6.7295 -1.2536 3.2656 12 6 8.8150 -1.1172 2.2205 13 6 9.5166 -1.2713 3.4171 14 6 10.8963 -1.2691 3.4094 15 6 11.6556 -1.4348 4.7006 16 8 11.8969 -2.8233 4.9364 17 6 12.5754 -3.1480 6.0683 18 6 12.8439 -4.4772 6.3601 19 6 13.5334 -4.8048 7.5117 20 6 13.8250 -6.2487 7.8297 21 8 12.5959 -6.9683 7.9463 22 14 14.7604 -6.3540 9.4373 23 6 13.9603 -3.8088 8.3702 24 6 13.6893 -2.4833 8.0842 25 6 13.0003 -2.1506 6.9342 26 6 11.5842 -1.1092 2.2199 27 6 10.8947 -0.9612 1.0293 28 6 9.5153 -0.9616 1.0230 29 6 4.6872 -1.4066 -0.3100 30 6 3.1566 -1.4080 -0.3095 31 1 -1.0500 -0.0001 0.0009 32 1 2.7920 1.4409 1.5953 33 1 2.7928 -0.2557 2.1339 34 1 5.0490 0.7493 2.3543 35 1 5.0485 1.1317 0.6157 36 1 7.1464 -0.8601 0.2309 37 1 8.9807 -1.3920 4.3469 38 1 11.0695 -1.0230 5.5222 39 1 12.6070 -0.9070 4.6328 40 1 12.5135 -5.2555 5.6881 41 1 14.4256 -6.6827 7.0304 42 1 12.0098 -6.6361 8.6401 43 1 13.9650 -5.7372 10.5292 44 1 15.0545 -7.7730 9.7619 45 1 14.5027 -4.0666 9.2678 46 1 14.0205 -1.7072 8.7582 47 1 12.7928 -1.1149 6.7090 48 1 12.6642 -1.1037 2.2199 49 1 11.4376 -0.8409 0.1035 50 1 8.9782 -0.8415 0.0937 51 1 5.0498 -0.7134 -1.0689 52 1 5.0509 -2.4102 -0.5304 53 1 2.7935 -1.7191 -1.2890 54 1 2.7936 -2.1010 0.4495 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12865462_4549630.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:42 Heat of formation + Delta-G solvation = -0.464943 kcal Electronic energy + Delta-G solvation = -34175.645793 eV Core-core repulsion = 29624.318928 eV Total energy + Delta-G solvation = -4551.326865 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.182 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.64549 -41.27021 -40.16259 -39.32986 -38.80274 -37.37833 -35.99556 -34.00788 -33.15389 -32.48683 -32.22037 -31.87327 -31.08310 -29.97540 -27.73861 -26.63804 -25.50059 -23.81860 -23.67571 -23.55826 -23.14089 -22.14617 -21.44306 -20.97302 -19.27036 -19.07420 -18.90109 -17.95391 -17.66440 -17.27361 -17.15450 -17.00017 -16.89169 -16.32381 -16.23650 -16.08140 -15.78994 -15.53370 -15.49171 -15.23577 -15.21800 -14.91182 -14.80123 -14.51551 -14.14819 -14.10337 -13.99641 -13.86554 -13.50189 -13.46401 -13.27519 -12.98657 -12.85860 -12.72385 -12.59448 -12.33249 -12.19068 -12.18577 -12.04117 -11.96528 -11.94718 -11.65820 -11.60147 -11.13469 -10.97437 -10.92488 -10.70459 -10.28615 -10.04135 -9.95387 -9.93779 -9.27205 -4.91938 -0.27374 0.14547 0.19682 0.39306 1.28775 1.61619 1.66873 1.84676 1.87816 1.94713 1.99342 2.24782 2.65958 2.86414 3.35388 3.37491 3.51367 3.54394 3.63956 3.66383 3.71751 3.76725 3.83954 3.98052 4.04006 4.07660 4.09751 4.12879 4.18115 4.20165 4.23132 4.25283 4.34426 4.38586 4.42618 4.43954 4.49392 4.54863 4.65508 4.65746 4.70800 4.72873 4.88214 4.97515 4.98263 5.02516 5.08138 5.10160 5.17550 5.19813 5.25110 5.27072 5.29469 5.33088 5.37121 5.38254 5.43626 5.44425 5.70665 5.77974 6.36024 6.43674 6.43838 6.67998 7.10570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.210 4.210 3 C 0.021 3.979 4 H 0.109 0.891 5 C -0.104 4.104 6 C -0.121 4.121 7 C 0.143 3.857 8 H 0.063 0.937 9 N -0.706 5.706 10 C 0.556 3.444 11 O -0.583 6.583 12 C -0.156 4.156 13 C -0.056 4.056 14 C -0.115 4.115 15 C 0.099 3.901 16 O -0.328 6.328 17 C 0.116 3.884 18 C -0.148 4.148 19 C -0.082 4.082 20 C -0.091 4.091 21 O -0.551 6.551 22 Si 0.782 3.218 23 C -0.158 4.158 24 C -0.073 4.073 25 C -0.207 4.207 26 C -0.069 4.069 27 C -0.125 4.125 28 C -0.068 4.068 29 C -0.116 4.116 30 C -0.104 4.104 31 H 0.237 0.763 32 H 0.070 0.930 33 H 0.054 0.946 34 H 0.049 0.951 35 H 0.087 0.913 36 H 0.416 0.584 37 H 0.116 0.884 38 H 0.076 0.924 39 H 0.098 0.902 40 H 0.118 0.882 41 H 0.123 0.877 42 H 0.386 0.614 43 H -0.281 1.281 44 H -0.303 1.303 45 H 0.149 0.851 46 H 0.158 0.842 47 H 0.148 0.852 48 H 0.151 0.849 49 H 0.165 0.835 50 H 0.161 0.839 51 H 0.097 0.903 52 H 0.082 0.918 53 H 0.082 0.918 54 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.451 5.390 -5.318 9.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C -0.210 4.210 3 C 0.003 3.997 4 H 0.126 0.874 5 C -0.142 4.142 6 C -0.160 4.160 7 C 0.039 3.961 8 H 0.081 0.919 9 N -0.357 5.357 10 C 0.345 3.655 11 O -0.464 6.464 12 C -0.159 4.159 13 C -0.076 4.076 14 C -0.115 4.115 15 C 0.025 3.975 16 O -0.243 6.243 17 C 0.071 3.929 18 C -0.166 4.166 19 C -0.082 4.082 20 C -0.199 4.199 21 O -0.359 6.359 22 Si 0.686 3.314 23 C -0.176 4.176 24 C -0.091 4.091 25 C -0.226 4.226 26 C -0.087 4.087 27 C -0.143 4.143 28 C -0.086 4.086 29 C -0.154 4.154 30 C -0.142 4.142 31 H 0.254 0.746 32 H 0.089 0.911 33 H 0.072 0.928 34 H 0.067 0.933 35 H 0.106 0.894 36 H 0.255 0.745 37 H 0.134 0.866 38 H 0.094 0.906 39 H 0.116 0.884 40 H 0.136 0.864 41 H 0.141 0.859 42 H 0.235 0.765 43 H -0.207 1.207 44 H -0.231 1.231 45 H 0.166 0.834 46 H 0.175 0.825 47 H 0.166 0.834 48 H 0.169 0.831 49 H 0.183 0.817 50 H 0.178 0.822 51 H 0.115 0.885 52 H 0.101 0.899 53 H 0.101 0.899 54 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 5.189 4.543 -4.451 8.208 hybrid contribution -1.761 -0.098 0.174 1.772 sum 3.428 4.445 -4.277 7.057 Atomic orbital electron populations 1.25690 0.96999 1.00206 1.00198 1.23608 0.95264 1.01072 1.01069 1.18444 0.83606 0.98984 0.98633 0.87364 1.21449 0.94866 1.01906 0.95969 1.21848 0.94993 0.96987 1.02160 1.21043 0.78678 0.97186 0.99189 0.91884 1.45838 1.07285 1.73123 1.09491 1.18571 0.87749 0.75434 0.83760 1.90771 1.70840 1.51527 1.33224 1.19909 0.92099 1.08424 0.95495 1.21160 0.93822 0.94713 0.97877 1.19522 0.92702 1.03953 0.95295 1.21744 1.00518 0.80279 0.94950 1.86131 1.71122 1.27847 1.39210 1.19186 0.93051 0.94104 0.86586 1.20301 1.03568 0.93721 0.99058 1.20150 0.97747 0.96210 0.94125 1.25427 0.91214 0.89154 1.14111 1.86573 1.30432 1.58908 1.59955 0.93918 0.86146 0.78948 0.72370 1.21180 1.02886 0.92963 1.00533 1.21291 0.95193 0.96764 0.95805 1.21582 1.04520 0.99563 0.96934 1.21656 1.01642 0.94021 0.91357 1.21538 0.93862 0.99520 0.99333 1.21712 0.95211 0.94762 0.96914 1.21777 0.95048 1.03490 0.95048 1.21481 0.94908 0.94970 1.02868 0.74627 0.91136 0.92761 0.93260 0.89423 0.74511 0.86607 0.90561 0.88429 0.86428 0.85878 0.76513 1.20726 1.23134 0.83428 0.82475 0.83406 0.83119 0.81704 0.82174 0.88465 0.89943 0.89917 0.92399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.61 19.25 74.32 1.43 0.82 16 2 C -0.21 -0.80 12.56 31.13 0.39 -0.41 16 3 C 0.02 -0.02 2.56 -12.60 -0.03 -0.05 16 4 H 0.11 -0.41 8.14 -2.39 -0.02 -0.43 16 5 C -0.10 -0.09 5.16 30.59 0.16 0.07 16 6 C -0.12 -0.02 5.49 30.60 0.17 0.15 16 7 C 0.14 -0.01 2.45 44.99 0.11 0.10 16 8 H 0.06 0.39 7.58 -2.39 -0.02 0.37 16 9 N -0.71 0.76 5.03 -445.40 -2.24 -1.48 16 10 C 0.56 3.72 7.74 86.79 0.67 4.40 16 11 O -0.58 -9.40 16.01 -3.86 -0.06 -9.46 16 12 C -0.16 -0.52 5.87 -20.09 -0.12 -0.64 16 13 C -0.06 -0.33 9.24 22.53 0.21 -0.12 16 14 C -0.11 -0.20 5.50 -19.90 -0.11 -0.31 16 15 C 0.10 0.05 4.86 71.24 0.35 0.39 16 16 O -0.33 -2.13 10.12 -92.51 -0.94 -3.07 16 17 C 0.12 0.63 6.69 22.50 0.15 0.78 16 18 C -0.15 -0.95 9.55 22.36 0.21 -0.73 16 19 C -0.08 -0.22 5.39 -19.88 -0.11 -0.33 16 20 C -0.09 -0.15 2.82 71.24 0.20 0.05 16 21 O -0.55 -3.09 12.77 -148.98 -1.90 -4.99 16 22 Si 0.78 -1.05 29.78 68.60 2.04 0.99 16 23 C -0.16 0.10 8.67 22.28 0.19 0.29 16 24 C -0.07 0.11 10.04 22.26 0.22 0.34 16 25 C -0.21 -0.14 9.04 22.36 0.20 0.06 16 26 C -0.07 0.18 9.69 22.33 0.22 0.40 16 27 C -0.12 0.67 10.03 22.23 0.22 0.89 16 28 C -0.07 0.27 9.54 22.53 0.21 0.49 16 29 C -0.12 0.65 5.39 30.61 0.17 0.81 16 30 C -0.10 0.27 5.16 30.61 0.16 0.43 16 31 H 0.24 -0.80 7.80 -4.42 -0.03 -0.83 16 32 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 33 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 34 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 35 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 36 H 0.42 -3.48 6.64 -92.71 -0.62 -4.10 16 37 H 0.12 1.06 7.65 -2.91 -0.02 1.04 16 38 H 0.08 -0.04 7.60 -2.39 -0.02 -0.06 16 39 H 0.10 -0.44 7.60 -2.38 -0.02 -0.46 16 40 H 0.12 1.00 8.06 -2.91 -0.02 0.98 16 41 H 0.12 0.04 7.96 -2.39 -0.02 0.02 16 42 H 0.39 0.02 8.70 -74.05 -0.64 -0.62 16 43 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 44 H -0.30 -1.92 7.11 99.48 0.71 -1.22 16 45 H 0.15 -0.76 4.87 -2.91 -0.01 -0.78 16 46 H 0.16 -1.14 8.06 -2.91 -0.02 -1.16 16 47 H 0.15 -0.55 6.30 -2.91 -0.02 -0.57 16 48 H 0.15 -1.05 8.06 -2.91 -0.02 -1.07 16 49 H 0.17 -1.88 8.06 -2.91 -0.02 -1.90 16 50 H 0.16 -1.82 6.41 -2.91 -0.02 -1.84 16 51 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 52 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 53 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 54 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 Total: 0.00 -26.20 445.26 1.89 -24.31 By element: Atomic # 1 Polarization: -13.89 SS G_CDS: -0.30 Total: -14.19 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: 5.28 Total: 7.89 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -2.24 Total: -1.48 kcal Atomic # 8 Polarization: -14.62 SS G_CDS: -2.90 Total: -17.52 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: 2.04 Total: 0.99 kcal Total: -26.20 1.89 -24.31 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_4549630.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.848 kcal (2) G-P(sol) polarization free energy of solvation -26.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds