Wall clock time and date at job start Tue Mar 9 2021 13:13:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.08997 * 109.47132 * 271.12157 * 3 2 1 5 5 C 1.52995 * 109.47446 * 31.12467 * 3 2 1 6 6 C 1.53000 * 109.47622 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47221 * 300.00676 * 6 5 3 8 8 H 1.09009 * 109.46764 * 299.99646 * 7 6 5 9 9 N 1.46501 * 109.47444 * 179.97438 * 7 6 5 10 10 C 1.34776 * 120.00461 * 154.99418 * 9 7 6 11 11 O 1.21693 * 119.99916 * 355.38868 * 10 9 7 12 12 C 1.46666 * 120.00074 * 175.38247 * 10 9 7 13 13 C 1.37890 * 126.22576 * 4.85921 * 12 10 9 14 14 C 1.39876 * 107.09195 * 179.97438 * 13 12 10 15 15 Br 1.89095 * 126.07320 * 180.02562 * 14 13 12 16 16 C 1.35507 * 107.85405 * 0.02562 * 14 13 12 17 17 C 1.50700 * 125.57206 * 179.97438 * 16 14 13 18 18 O 1.42906 * 109.46981 * 295.49116 * 17 16 14 19 19 Si 1.86298 * 109.47318 * 55.49202 * 17 16 14 20 20 N 1.35602 * 108.85446 * 359.72988 * 16 14 13 21 21 C 1.46504 * 125.67482 * 180.28859 * 20 16 14 22 22 C 1.52995 * 109.47374 * 59.99173 * 7 6 5 23 23 C 1.52995 * 109.47511 * 300.00080 * 22 7 6 24 24 H 4.18741 * 15.04023 * 0.02562 * 4 2 1 25 25 H 1.09001 * 109.47334 * 299.99918 * 5 3 2 26 26 H 1.09009 * 109.46788 * 59.99723 * 5 3 2 27 27 H 1.09007 * 109.46689 * 59.99735 * 6 5 3 28 28 H 1.08996 * 109.47249 * 180.02562 * 6 5 3 29 29 H 0.97005 * 119.99249 * 334.99713 * 9 7 6 30 30 H 1.07999 * 126.45337 * 359.97276 * 13 12 10 31 31 H 1.09006 * 109.47229 * 175.49598 * 17 16 14 32 32 H 0.96707 * 113.99760 * 60.00088 * 18 17 16 33 33 H 1.48495 * 109.99702 * 63.70266 * 19 17 16 34 34 H 1.48499 * 110.00091 * 185.02265 * 19 17 16 35 35 H 1.09002 * 109.47006 * 263.80320 * 21 20 16 36 36 H 1.08997 * 109.46893 * 23.79635 * 21 20 16 37 37 H 1.08995 * 109.46724 * 143.80137 * 21 20 16 38 38 H 1.09007 * 109.47305 * 60.00469 * 22 7 6 39 39 H 1.09010 * 109.47198 * 180.02562 * 22 7 6 40 40 H 1.08999 * 109.47479 * 299.99930 * 23 22 7 41 41 H 1.09001 * 109.47367 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0094 -0.0193 1.0274 5 6 3.1566 -1.2339 -0.7456 6 6 4.6866 -1.2329 -0.7462 7 6 5.1956 0.0305 -1.4430 8 1 4.8318 0.0503 -2.4704 9 7 6.6606 0.0318 -1.4430 10 6 7.3339 0.7202 -2.3860 11 8 6.7280 1.2713 -3.2860 12 6 8.7970 0.8053 -2.3273 13 6 9.6154 0.1578 -1.4260 14 6 10.9313 0.5203 -1.7316 15 35 12.4858 -0.0643 -0.8275 16 6 10.8944 1.3648 -2.7907 17 6 12.0927 1.9993 -3.4483 18 8 12.7353 2.8772 -2.5218 19 14 13.2875 0.6708 -3.9760 20 7 9.6032 1.5414 -3.1655 21 6 9.1427 2.3788 -4.2759 22 6 4.6850 1.2651 -0.6974 23 6 3.1550 1.2641 -0.6969 24 1 -1.0500 -0.0005 0.0000 25 1 2.7938 -2.1340 -0.2493 26 1 2.7932 -1.2139 -1.7731 27 1 5.0503 -1.2526 0.2813 28 1 5.0503 -2.1122 -1.2777 29 1 7.1460 -0.4629 -0.7643 30 1 9.2998 -0.5044 -0.6334 31 1 11.7703 2.5659 -4.3219 32 1 13.0489 2.4399 -1.7183 33 1 12.6608 -0.1957 -5.0063 34 1 14.5262 1.2869 -4.5156 35 1 8.8490 3.3572 -3.8956 36 1 9.9488 2.4976 -4.9999 37 1 8.2879 1.9048 -4.7582 38 1 5.0486 1.2453 0.3300 39 1 5.0472 2.1652 -1.1941 40 1 2.7913 1.2840 -1.7243 41 1 2.7913 2.1434 -0.1653 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_5000100.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:16 Heat of formation + Delta-G solvation = 27.439678 kcal Electronic energy + Delta-G solvation = -24776.357727 eV Core-core repulsion = 21091.885116 eV Total energy + Delta-G solvation = -3684.472611 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.057 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -42.88091 -40.91313 -39.27527 -37.86339 -36.01192 -34.58020 -33.60023 -32.29414 -31.95702 -31.12111 -30.00813 -27.45832 -26.95265 -24.33962 -23.87106 -23.02718 -21.44353 -21.30439 -20.44690 -19.11433 -19.04317 -18.21551 -17.39588 -17.26892 -16.69239 -16.15482 -15.89599 -15.78151 -15.58618 -15.31394 -15.12466 -14.85464 -14.59846 -14.40679 -14.14758 -14.01771 -13.95654 -13.83931 -13.35587 -13.28839 -12.81284 -12.59325 -12.38360 -12.27179 -12.23947 -12.02594 -11.96682 -11.70053 -11.57363 -11.08075 -10.97359 -10.92130 -10.83056 -10.19603 -9.86059 -9.32273 -4.95077 0.16830 0.46154 0.92343 1.17417 1.48751 1.63370 1.91147 1.92170 1.94464 2.19393 2.22609 3.16310 3.31218 3.39294 3.47438 3.57955 3.61300 3.64986 3.83011 3.99403 4.05072 4.08759 4.13050 4.21984 4.29732 4.31781 4.35174 4.36919 4.52924 4.56126 4.62415 4.64415 4.89410 4.95278 5.00927 5.04284 5.15144 5.18699 5.23975 5.28612 5.40234 5.56788 5.76683 6.31024 6.34527 6.72732 7.05347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.094 0.906 5 C -0.107 4.107 6 C -0.126 4.126 7 C 0.146 3.854 8 H 0.094 0.906 9 N -0.714 5.714 10 C 0.593 3.407 11 O -0.541 6.541 12 C -0.037 4.037 13 C -0.103 4.103 14 C -0.177 4.177 15 Br 0.015 6.985 16 C 0.059 3.941 17 C -0.050 4.050 18 O -0.529 6.529 19 Si 0.661 3.339 20 N -0.387 5.387 21 C 0.062 3.938 22 C -0.129 4.129 23 C -0.108 4.108 24 H 0.217 0.783 25 H 0.075 0.925 26 H 0.071 0.929 27 H 0.074 0.926 28 H 0.076 0.924 29 H 0.404 0.596 30 H 0.159 0.841 31 H 0.117 0.883 32 H 0.379 0.621 33 H -0.247 1.247 34 H -0.235 1.235 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.109 0.891 38 H 0.069 0.931 39 H 0.071 0.929 40 H 0.070 0.930 41 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.027 -2.746 2.961 4.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.112 0.888 5 C -0.145 4.145 6 C -0.164 4.164 7 C 0.042 3.958 8 H 0.112 0.888 9 N -0.364 5.364 10 C 0.381 3.619 11 O -0.419 6.419 12 C -0.151 4.151 13 C -0.130 4.130 14 C -0.262 4.262 15 Br 0.099 6.901 16 C -0.063 4.063 17 C -0.160 4.160 18 O -0.334 6.334 19 Si 0.558 3.442 20 N -0.060 5.060 21 C -0.079 4.079 22 C -0.168 4.168 23 C -0.146 4.146 24 H 0.234 0.766 25 H 0.093 0.907 26 H 0.090 0.910 27 H 0.093 0.907 28 H 0.095 0.905 29 H 0.239 0.761 30 H 0.176 0.824 31 H 0.135 0.865 32 H 0.228 0.772 33 H -0.170 1.170 34 H -0.159 1.159 35 H 0.104 0.896 36 H 0.104 0.896 37 H 0.127 0.873 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.089 0.911 41 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.265 -2.231 1.211 2.552 hybrid contribution -0.890 0.408 0.119 0.986 sum -0.625 -1.823 1.329 2.341 Atomic orbital electron populations 1.24988 0.96017 1.00242 1.00717 1.22987 0.94227 1.00811 1.00636 1.18372 0.84505 0.96042 1.00912 0.88846 1.21496 0.94162 0.97378 1.01426 1.21823 0.95976 0.97135 1.01507 1.21089 0.78054 0.95198 1.01457 0.88824 1.45696 1.07357 1.51920 1.31464 1.16823 0.84590 0.78705 0.81804 1.90828 1.69709 1.46835 1.34517 1.20059 0.91625 1.05154 0.98260 1.21171 0.90112 1.01762 0.99982 1.20643 0.93357 1.09200 1.03032 1.96603 1.31016 1.89146 1.73356 1.20940 0.85881 1.01125 0.98332 1.24773 0.94349 1.01964 0.94944 1.86540 1.76958 1.36479 1.33434 0.93844 0.80111 0.80982 0.89279 1.43798 1.04388 1.33852 1.23941 1.22418 1.02426 0.95550 0.87473 1.21944 0.95325 0.98384 1.01121 1.21514 0.94661 0.96882 1.01504 0.76621 0.90663 0.91016 0.90745 0.90500 0.76111 0.82395 0.86539 0.77172 1.17042 1.15875 0.89554 0.89553 0.87299 0.91181 0.90981 0.91110 0.90970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.18 19.25 29.55 0.57 0.39 16 2 C -0.19 -0.23 12.56 -37.12 -0.47 -0.70 16 3 C 0.02 -0.02 2.57 -93.41 -0.24 -0.26 16 4 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 5 C -0.11 0.20 5.16 -26.73 -0.14 0.06 16 6 C -0.13 0.38 5.39 -26.73 -0.14 0.24 16 7 C 0.15 -0.20 2.49 -67.93 -0.17 -0.37 16 8 H 0.09 0.06 7.52 -51.92 -0.39 -0.33 16 9 N -0.71 1.01 5.06 -55.12 -0.28 0.73 16 10 C 0.59 0.91 7.74 -12.86 -0.10 0.81 16 11 O -0.54 -2.42 14.42 5.19 0.07 -2.34 16 12 C -0.04 -0.04 6.88 -81.98 -0.56 -0.61 16 13 C -0.10 0.04 10.34 -39.10 -0.40 -0.36 16 14 C -0.18 -0.04 6.04 -39.94 -0.24 -0.28 16 15 Br 0.01 -0.02 29.42 -68.01 -2.00 -2.02 16 16 C 0.06 0.06 5.46 -81.90 -0.45 -0.38 16 17 C -0.05 -0.03 2.82 36.01 0.10 0.07 16 18 O -0.53 -0.73 12.88 -35.23 -0.45 -1.18 16 19 Si 0.66 0.24 29.75 -169.99 -5.06 -4.82 16 20 N -0.39 -0.57 3.16 -115.59 -0.37 -0.94 16 21 C 0.06 0.00 10.25 59.85 0.61 0.61 16 22 C -0.13 0.14 5.49 -26.74 -0.15 0.00 16 23 C -0.11 0.09 5.16 -26.73 -0.14 -0.05 16 24 H 0.22 -0.42 7.80 -54.09 -0.42 -0.84 16 25 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 27 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.40 -1.58 7.50 -40.82 -0.31 -1.88 16 30 H 0.16 -0.53 7.45 -52.49 -0.39 -0.92 16 31 H 0.12 -0.02 6.32 -51.93 -0.33 -0.35 16 32 H 0.38 -0.37 7.11 45.56 0.32 -0.05 16 33 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 34 H -0.24 -0.56 7.11 56.52 0.40 -0.16 16 35 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 36 H 0.09 -0.16 6.66 -51.93 -0.35 -0.51 16 37 H 0.11 0.09 6.59 -51.93 -0.34 -0.25 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 0.05 8.14 -51.92 -0.42 -0.37 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 354.88 15.07 5.35 5.35 Total: 0.00 -6.62 354.88 -10.27 -16.89 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -5.63 Total: -10.84 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -1.92 Total: -0.83 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.64 Total: -0.21 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.38 Total: -3.52 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: -5.06 Total: -4.82 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.00 Total: -2.02 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -6.62 -10.27 -16.89 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_5000100.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.332 kcal (2) G-P(sol) polarization free energy of solvation -6.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.714 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.440 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds