Wall clock time and date at job start Tue Mar 9 2021 13:13:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 H 1.08995 * 109.46940 * 101.34568 * 3 2 1 5 5 C 1.52997 * 109.47107 * 221.34635 * 3 2 1 6 6 C 1.53003 * 109.47127 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.47010 * 300.00125 * 6 5 3 8 8 H 1.08995 * 109.47098 * 299.99700 * 7 6 5 9 9 N 1.46498 * 109.47257 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99828 * 84.72116 * 9 7 6 11 11 O 1.21693 * 120.00014 * 0.28042 * 10 9 7 12 12 C 1.46682 * 120.00182 * 180.27909 * 10 9 7 13 13 C 1.37865 * 126.23190 * 180.02562 * 12 10 9 14 14 C 1.39839 * 107.08096 * 179.97438 * 13 12 10 15 15 C 1.35445 * 107.86750 * 0.02562 * 14 13 12 16 16 C 1.50698 * 125.56667 * 179.97438 * 15 14 13 17 17 O 1.42902 * 109.47233 * 120.02427 * 16 15 14 18 18 Si 1.86302 * 109.47073 * 0.02562 * 16 15 14 19 19 N 1.35535 * 108.87138 * 359.76872 * 15 14 13 20 20 C 1.53004 * 109.47083 * 59.99777 * 7 6 5 21 21 C 1.52994 * 109.47215 * 299.99913 * 20 7 6 22 22 H 4.18737 * 15.03837 * 0.02562 * 4 2 1 23 23 H 1.08996 * 109.47253 * 300.00046 * 5 3 2 24 24 H 1.09003 * 109.47446 * 59.99890 * 5 3 2 25 25 H 1.08996 * 109.47248 * 179.97438 * 6 5 3 26 26 H 1.08995 * 109.46945 * 59.99919 * 6 5 3 27 27 H 0.97001 * 120.00384 * 265.00562 * 9 7 6 28 28 H 1.07998 * 126.46374 * 359.97438 * 13 12 10 29 29 H 1.08003 * 126.06763 * 179.97438 * 14 13 12 30 30 H 1.09000 * 109.47412 * 240.02455 * 16 15 14 31 31 H 0.96695 * 113.99934 * 180.02562 * 17 16 15 32 32 H 1.48493 * 109.99935 * 298.68055 * 18 16 15 33 33 H 1.48506 * 109.99828 * 60.00289 * 18 16 15 34 34 H 0.96998 * 125.67897 * 180.26976 * 19 15 14 35 35 H 1.08994 * 109.46839 * 60.00381 * 20 7 6 36 36 H 1.08998 * 109.46617 * 179.97438 * 20 7 6 37 37 H 1.08996 * 109.47083 * 180.02562 * 21 20 7 38 38 H 1.09003 * 109.47213 * 300.00438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0093 0.2030 -1.0075 5 6 3.1556 1.0838 0.9529 6 6 4.6856 1.0849 0.9524 7 6 5.1967 -0.2815 1.4134 8 1 4.8339 -0.4841 2.4210 9 7 6.6617 -0.2807 1.4124 10 6 7.3360 0.1931 2.4788 11 8 6.7280 0.6156 3.4446 12 6 8.8028 0.1996 2.4753 13 6 9.6181 0.6514 3.4912 14 6 10.9389 0.4718 3.0685 15 6 10.9081 -0.0738 1.8292 16 6 12.1136 -0.4326 0.9992 17 8 12.0960 -1.8327 0.7139 18 14 13.6643 -0.0103 1.9415 19 7 9.6160 -0.2486 1.4592 20 6 4.6871 -1.3647 0.4605 21 6 3.1572 -1.3658 0.4610 22 1 -1.0500 0.0004 0.0003 23 1 2.7918 2.0573 0.6243 24 1 2.7923 0.8815 1.9605 25 1 5.0486 1.8568 1.6309 26 1 5.0484 1.2875 -0.0552 27 1 7.1464 -0.6174 0.6426 28 1 9.2972 1.0659 4.4354 29 1 11.8262 0.7243 3.6302 30 1 12.0919 0.1288 0.0651 31 1 12.8447 -2.1352 0.1821 32 1 13.7101 1.4482 2.2165 33 1 13.7060 -0.7695 3.2172 34 1 9.3145 -0.6257 0.6179 35 1 5.0500 -1.1621 -0.5471 36 1 5.0517 -2.3380 0.7887 37 1 2.7942 -2.1377 -0.2175 38 1 2.7943 -1.5683 1.4687 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_6580494.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:28 Heat of formation + Delta-G solvation = 20.696670 kcal Electronic energy + Delta-G solvation = -20652.575740 eV Core-core repulsion = 17463.166352 eV Total energy + Delta-G solvation = -3189.409388 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.131 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.51561 -40.81875 -39.20325 -37.79186 -35.89815 -33.63131 -32.22299 -31.94767 -31.58691 -30.01222 -26.86186 -24.41304 -23.86991 -22.69032 -21.61855 -21.39926 -20.94178 -19.51687 -19.06522 -18.63068 -17.39077 -16.92902 -16.33395 -16.11848 -15.78916 -15.48069 -15.34832 -15.17545 -15.06579 -14.57348 -14.37743 -14.14904 -13.88746 -13.69305 -13.45362 -13.34435 -12.81999 -12.75355 -12.38140 -12.26461 -12.03795 -11.95395 -11.69252 -11.12267 -10.97166 -10.90760 -10.62958 -10.17913 -10.08654 -9.24367 -5.07795 0.35787 1.08248 1.50147 1.65550 1.91748 1.93231 1.94895 1.98501 2.08569 2.39418 3.14889 3.33030 3.51981 3.64505 3.69944 3.79826 4.00177 4.05265 4.07919 4.14176 4.21335 4.30756 4.33061 4.35333 4.40890 4.59042 4.62844 4.88943 4.94721 4.97946 5.01370 5.04418 5.07388 5.15976 5.21619 5.29229 5.39319 5.60187 5.79707 6.19893 6.37335 6.43431 6.73292 7.13216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.108 4.108 6 C -0.129 4.129 7 C 0.145 3.855 8 H 0.094 0.906 9 N -0.729 5.729 10 C 0.592 3.408 11 O -0.522 6.522 12 C -0.051 4.051 13 C -0.096 4.096 14 C -0.208 4.208 15 C 0.069 3.931 16 C -0.060 4.060 17 O -0.550 6.550 18 Si 0.717 3.283 19 N -0.521 5.521 20 C -0.126 4.126 21 C -0.106 4.106 22 H 0.217 0.783 23 H 0.072 0.928 24 H 0.071 0.929 25 H 0.074 0.926 26 H 0.067 0.933 27 H 0.394 0.606 28 H 0.154 0.846 29 H 0.143 0.857 30 H 0.077 0.923 31 H 0.387 0.613 32 H -0.252 1.252 33 H -0.248 1.248 34 H 0.417 0.583 35 H 0.071 0.929 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.066 -1.687 -6.248 7.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.146 4.146 6 C -0.168 4.168 7 C 0.041 3.959 8 H 0.112 0.888 9 N -0.380 5.380 10 C 0.380 3.620 11 O -0.397 6.397 12 C -0.164 4.164 13 C -0.122 4.122 14 C -0.232 4.232 15 C -0.050 4.050 16 C -0.169 4.169 17 O -0.357 6.357 18 Si 0.616 3.384 19 N -0.117 5.117 20 C -0.164 4.164 21 C -0.144 4.144 22 H 0.234 0.766 23 H 0.090 0.910 24 H 0.090 0.910 25 H 0.093 0.907 26 H 0.085 0.915 27 H 0.227 0.773 28 H 0.172 0.828 29 H 0.161 0.839 30 H 0.094 0.906 31 H 0.236 0.764 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.255 0.745 35 H 0.090 0.910 36 H 0.094 0.906 37 H 0.093 0.907 38 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.299 -1.083 -4.573 5.742 hybrid contribution -0.751 -0.257 -1.011 1.285 sum 2.548 -1.341 -5.584 6.282 Atomic orbital electron populations 1.24985 0.96008 1.00233 1.00684 1.22980 0.94214 1.00826 1.00656 1.18364 0.84532 0.96205 1.00703 0.88961 1.21515 0.94663 0.98485 0.99908 1.21940 0.95335 0.97386 1.02127 1.21078 0.78311 0.95284 1.01245 0.88798 1.45964 1.07596 1.65279 1.19126 1.17011 0.84730 0.77505 0.82767 1.90873 1.68294 1.46664 1.33916 1.20448 0.90355 1.13319 0.92280 1.21286 0.91145 1.01199 0.98601 1.20569 0.97881 1.09570 0.95188 1.19964 0.83938 1.04773 0.96279 1.24538 1.03206 0.86004 1.03196 1.86470 1.51839 1.21109 1.76305 0.95175 0.80605 0.80932 0.81721 1.41897 1.05422 1.47961 1.16421 1.21822 0.96097 0.98814 0.99704 1.21491 0.94087 0.96094 1.02776 0.76591 0.90952 0.91006 0.90711 0.91466 0.77280 0.82844 0.83936 0.90554 0.76406 1.17634 1.17179 0.74524 0.91014 0.90637 0.90714 0.90929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.26 19.25 29.55 0.57 0.31 16 2 C -0.19 -0.33 12.56 -37.12 -0.47 -0.79 16 3 C 0.02 -0.01 2.56 -93.41 -0.24 -0.25 16 4 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 5 C -0.11 0.00 5.16 -26.73 -0.14 -0.13 16 6 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 7 C 0.14 -0.03 2.45 -67.93 -0.17 -0.19 16 8 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 9 N -0.73 0.13 5.07 -55.11 -0.28 -0.15 16 10 C 0.59 1.95 7.75 -12.85 -0.10 1.85 16 11 O -0.52 -3.63 16.55 5.20 0.09 -3.54 16 12 C -0.05 -0.14 7.06 -81.98 -0.58 -0.72 16 13 C -0.10 -0.35 10.65 -39.12 -0.42 -0.76 16 14 C -0.21 -0.58 9.32 -39.98 -0.37 -0.95 16 15 C 0.07 0.10 6.51 -81.95 -0.53 -0.43 16 16 C -0.06 0.10 3.07 36.00 0.11 0.21 16 17 O -0.55 0.91 12.86 -35.23 -0.45 0.46 16 18 Si 0.72 -1.65 30.54 -169.99 -5.19 -6.84 16 19 N -0.52 -0.28 5.99 -5.70 -0.03 -0.32 16 20 C -0.13 0.27 5.39 -26.73 -0.14 0.12 16 21 C -0.11 0.12 5.16 -26.73 -0.14 -0.01 16 22 H 0.22 -0.35 7.80 -54.09 -0.42 -0.77 16 23 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 24 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 25 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.39 -1.14 7.73 -40.82 -0.32 -1.46 16 28 H 0.15 0.48 8.06 -52.49 -0.42 0.05 16 29 H 0.14 0.26 6.17 -52.48 -0.32 -0.06 16 30 H 0.08 -0.27 7.96 -51.93 -0.41 -0.69 16 31 H 0.39 -2.58 8.74 45.56 0.40 -2.19 16 32 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 33 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 34 H 0.42 -0.98 8.19 -40.82 -0.33 -1.31 16 35 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 LS Contribution 323.12 15.07 4.87 4.87 Total: 0.00 -8.99 323.12 -8.99 -17.98 By element: Atomic # 1 Polarization: -5.34 SS G_CDS: -5.23 Total: -10.57 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -2.76 Total: -1.89 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -0.31 Total: -0.47 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.37 Total: -3.08 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.19 Total: -6.84 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -8.99 -8.99 -17.98 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_6580494.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.676 kcal (2) G-P(sol) polarization free energy of solvation -8.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.993 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.979 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds