Wall clock time and date at job start Tue Mar 9 2021 13:13:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 H 1.09000 * 109.46978 * 115.73612 * 3 2 1 5 5 C 1.52999 * 109.46975 * 235.73378 * 3 2 1 6 6 C 1.52992 * 109.46921 * 179.97438 * 5 3 2 7 7 C 1.52999 * 109.47689 * 299.99639 * 6 5 3 8 8 H 1.08999 * 109.47014 * 300.00743 * 7 6 5 9 9 N 1.46499 * 109.47493 * 180.02562 * 7 6 5 10 10 C 1.34777 * 119.99665 * 155.28120 * 9 7 6 11 11 O 1.21283 * 119.99990 * 359.71991 * 10 9 7 12 12 C 1.50698 * 119.99538 * 179.72653 * 10 9 7 13 13 N 1.46509 * 109.47002 * 179.97438 * 12 10 9 14 14 C 1.36826 * 125.06125 * 265.02516 * 13 12 10 15 15 C 1.34229 * 109.94104 * 179.97438 * 14 13 12 16 16 C 1.50702 * 126.50395 * 180.02562 * 15 14 13 17 17 O 1.42904 * 109.46970 * 254.97080 * 16 15 14 18 18 Si 1.86291 * 109.47094 * 14.97029 * 16 15 14 19 19 C 1.46498 * 106.99769 * 359.97438 * 15 14 13 20 20 C 1.39594 * 134.03981 * 180.02562 * 19 15 14 21 21 C 1.36655 * 119.76466 * 179.97438 * 20 19 15 22 22 C 1.38791 * 120.53136 * 0.02562 * 21 20 19 23 23 C 1.37795 * 120.66285 * 359.97438 * 22 21 20 24 24 C 1.37691 * 125.06178 * 84.71663 * 13 12 10 25 25 C 1.53008 * 109.46675 * 60.00323 * 7 6 5 26 26 C 1.53002 * 109.47081 * 355.73334 * 3 2 1 27 27 H 4.18736 * 15.03887 * 359.97438 * 4 2 1 28 28 H 1.08999 * 109.46965 * 59.99752 * 5 3 2 29 29 H 1.09006 * 109.47222 * 300.00085 * 5 3 2 30 30 H 1.09009 * 109.47102 * 180.02562 * 6 5 3 31 31 H 1.08999 * 109.47499 * 60.00085 * 6 5 3 32 32 H 0.97001 * 119.99790 * 334.99833 * 9 7 6 33 33 H 1.09003 * 109.47112 * 299.99065 * 12 10 9 34 34 H 1.08993 * 109.47916 * 59.99687 * 12 10 9 35 35 H 1.08005 * 125.03259 * 359.95704 * 14 13 12 36 36 H 1.09001 * 109.47284 * 134.97360 * 16 15 14 37 37 H 0.96705 * 113.99616 * 59.99827 * 17 16 15 38 38 H 1.48508 * 110.00140 * 180.02562 * 18 16 15 39 39 H 1.48500 * 110.00014 * 301.31936 * 18 16 15 40 40 H 1.08005 * 120.11555 * 359.96120 * 20 19 15 41 41 H 1.07994 * 119.73803 * 180.02562 * 21 20 19 42 42 H 1.07992 * 119.66856 * 179.97438 * 22 21 20 43 43 H 1.08001 * 120.10847 * 180.02562 * 23 22 21 44 44 H 1.09000 * 109.47169 * 59.99905 * 25 7 6 45 45 H 1.08995 * 109.47066 * 180.02562 * 25 7 6 46 46 H 1.08999 * 109.47056 * 300.00368 * 26 3 2 47 47 H 1.09000 * 109.46999 * 59.99848 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0092 0.4471 -0.9257 5 6 3.1557 0.8131 1.1921 6 6 4.6856 0.8132 1.1925 7 6 5.1958 -0.6252 1.3002 8 1 4.8323 -1.0713 2.2259 9 7 6.6608 -0.6249 1.3011 10 6 7.3344 -1.6458 1.8673 11 8 6.7278 -2.5622 2.3804 12 6 8.8414 -1.6486 1.8628 13 7 9.3295 -2.8558 2.5342 14 6 9.6869 -2.9319 3.8528 15 6 10.0882 -4.1785 4.1471 16 6 10.5609 -4.6747 5.4893 17 8 11.9813 -4.8303 5.4664 18 14 10.0923 -3.4437 6.8067 19 6 9.9785 -4.9656 2.9164 20 6 10.2421 -6.2968 2.5891 21 6 10.0294 -6.7365 1.3128 22 6 9.5537 -5.8699 0.3386 23 6 9.2869 -4.5521 0.6399 24 6 9.4913 -4.0843 1.9337 25 6 4.6862 -1.4376 0.1080 26 6 3.1567 -1.4376 0.1073 27 1 -1.0499 -0.0006 0.0002 28 1 2.7925 0.3667 2.1178 29 1 2.7918 1.8378 1.1157 30 1 5.0487 1.3917 2.0421 31 1 5.0492 1.2593 0.2668 32 1 7.1459 0.1079 0.8907 33 1 9.2017 -1.6337 0.8341 34 1 9.2080 -0.7673 2.3890 35 1 9.6515 -2.1104 4.5531 36 1 10.0937 -5.6352 5.7068 37 1 12.4634 -4.0134 5.2781 38 1 10.5534 -3.9211 8.1352 39 1 10.6972 -2.1216 6.5047 40 1 10.6130 -6.9767 3.3419 41 1 10.2331 -7.7665 1.0602 42 1 9.3910 -6.2322 -0.6657 43 1 8.9166 -3.8857 -0.1250 44 1 5.0497 -0.9915 -0.8177 45 1 5.0493 -2.4624 0.1849 46 1 2.7935 -1.8840 1.0330 47 1 2.7936 -2.0164 -0.7420 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12865462_9818708.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:45 Heat of formation + Delta-G solvation = 49.993874 kcal Electronic energy + Delta-G solvation = -28858.514018 eV Core-core repulsion = 24974.621392 eV Total energy + Delta-G solvation = -3883.892625 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.162 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.53449 -41.01868 -39.39643 -38.14840 -37.68844 -35.86743 -34.16715 -33.47151 -31.84668 -31.54309 -30.29982 -30.19185 -28.59256 -25.84974 -24.19502 -23.77478 -23.59576 -22.59464 -21.56747 -21.15014 -20.64037 -19.05947 -18.68566 -18.37705 -17.80362 -17.43154 -16.91603 -16.41481 -16.33596 -16.17102 -15.86933 -15.61588 -15.42593 -15.28980 -15.17612 -14.81965 -14.70774 -14.41865 -14.07010 -14.06699 -13.92483 -13.59587 -13.25960 -13.15701 -12.75936 -12.72392 -12.56448 -12.39710 -12.30774 -12.16071 -11.99885 -11.92743 -11.73468 -11.62405 -11.10911 -10.96374 -10.90546 -10.54025 -10.44882 -10.09679 -9.15809 -8.63001 -4.86192 0.14285 0.64244 1.35221 1.42128 1.51497 1.58184 1.69594 1.85570 1.88813 1.97289 2.23155 2.95156 3.37872 3.53973 3.60990 3.66552 3.68146 3.73805 3.78225 3.84758 4.03930 4.08490 4.15781 4.16960 4.21757 4.23611 4.30269 4.38582 4.42412 4.46702 4.50258 4.58957 4.68691 4.71981 4.75033 4.79170 4.89591 5.02207 5.05388 5.11152 5.13088 5.13909 5.22132 5.29679 5.36927 5.49779 5.50950 5.66475 5.73792 5.75426 6.19738 6.24335 6.53235 6.60764 6.68847 7.20510 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C -0.211 4.211 3 C 0.021 3.979 4 H 0.107 0.893 5 C -0.105 4.105 6 C -0.114 4.114 7 C 0.147 3.853 8 H 0.063 0.937 9 N -0.708 5.708 10 C 0.492 3.508 11 O -0.567 6.567 12 C 0.087 3.913 13 N -0.465 5.465 14 C 0.075 3.925 15 C -0.216 4.216 16 C -0.051 4.051 17 O -0.553 6.553 18 Si 0.765 3.235 19 C -0.116 4.116 20 C -0.089 4.089 21 C -0.154 4.154 22 C -0.108 4.108 23 C -0.133 4.133 24 C 0.092 3.908 25 C -0.121 4.121 26 C -0.105 4.105 27 H 0.236 0.764 28 H 0.057 0.943 29 H 0.080 0.920 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.421 0.579 33 H 0.142 0.858 34 H 0.162 0.838 35 H 0.197 0.803 36 H 0.102 0.898 37 H 0.384 0.616 38 H -0.302 1.302 39 H -0.258 1.258 40 H 0.118 0.882 41 H 0.136 0.864 42 H 0.145 0.855 43 H 0.133 0.867 44 H 0.085 0.915 45 H 0.047 0.953 46 H 0.053 0.947 47 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.804 8.958 -3.907 9.807 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C -0.211 4.211 3 C 0.003 3.997 4 H 0.125 0.875 5 C -0.143 4.143 6 C -0.152 4.152 7 C 0.043 3.957 8 H 0.081 0.919 9 N -0.361 5.361 10 C 0.277 3.723 11 O -0.445 6.445 12 C -0.038 4.038 13 N -0.148 5.148 14 C -0.051 4.051 15 C -0.223 4.223 16 C -0.159 4.159 17 O -0.361 6.361 18 Si 0.667 3.333 19 C -0.121 4.121 20 C -0.107 4.107 21 C -0.173 4.173 22 C -0.127 4.127 23 C -0.154 4.154 24 C -0.013 4.013 25 C -0.159 4.159 26 C -0.143 4.143 27 H 0.253 0.747 28 H 0.076 0.924 29 H 0.099 0.901 30 H 0.104 0.896 31 H 0.113 0.887 32 H 0.259 0.741 33 H 0.160 0.840 34 H 0.179 0.821 35 H 0.214 0.786 36 H 0.120 0.880 37 H 0.233 0.767 38 H -0.230 1.230 39 H -0.184 1.184 40 H 0.136 0.864 41 H 0.154 0.846 42 H 0.163 0.837 43 H 0.151 0.849 44 H 0.104 0.896 45 H 0.066 0.934 46 H 0.071 0.929 47 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.197 8.544 -2.935 9.113 hybrid contribution 0.751 -0.217 -0.590 0.979 sum -0.447 8.328 -3.524 9.054 Atomic orbital electron populations 1.25690 0.97022 1.00055 1.00448 1.23655 0.95340 1.01105 1.00956 1.18459 0.83508 0.96748 1.00976 0.87542 1.21477 0.95349 1.00556 0.96942 1.21747 0.94667 0.94085 1.04716 1.20934 0.79270 0.97160 0.98378 0.91902 1.45871 1.06976 1.24280 1.58939 1.21384 0.91031 0.82107 0.77787 1.90810 1.70724 1.36874 1.46123 1.21991 0.90348 0.88269 1.03143 1.43442 1.55065 1.07783 1.08478 1.22008 0.99522 0.98591 0.84972 1.20701 1.12485 0.93729 0.95409 1.24580 0.82587 1.09577 0.99175 1.86564 1.17661 1.38561 1.93305 0.94042 0.90689 0.75192 0.73327 1.19344 1.04685 0.94190 0.93835 1.20450 0.99289 0.93888 0.97085 1.20912 1.02499 1.00844 0.93059 1.21130 0.98734 0.92536 1.00283 1.20243 1.04892 0.96938 0.93291 1.18391 1.02522 0.85616 0.94803 1.21825 0.94718 1.00076 0.99295 1.21440 0.95267 0.95422 1.02154 0.74700 0.92374 0.90143 0.89613 0.88719 0.74146 0.83994 0.82084 0.78608 0.87954 0.76739 1.23000 1.18356 0.86390 0.84645 0.83730 0.84913 0.89608 0.93442 0.92860 0.91539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.43 19.25 74.32 1.43 1.00 16 2 C -0.21 -0.58 12.56 31.13 0.39 -0.19 16 3 C 0.02 -0.05 2.57 -12.60 -0.03 -0.08 16 4 H 0.11 -0.54 8.14 -2.39 -0.02 -0.56 16 5 C -0.11 0.51 5.16 30.59 0.16 0.67 16 6 C -0.11 1.03 5.39 30.59 0.16 1.20 16 7 C 0.15 -0.66 2.45 44.99 0.11 -0.55 16 8 H 0.06 0.12 7.58 -2.39 -0.02 0.10 16 9 N -0.71 5.76 5.08 -442.52 -2.25 3.51 16 10 C 0.49 -0.98 7.86 87.66 0.69 -0.30 16 11 O -0.57 -5.50 16.08 -3.04 -0.05 -5.55 16 12 C 0.09 -0.66 6.48 85.63 0.56 -0.11 16 13 N -0.47 -0.70 2.27 -519.99 -1.18 -1.88 16 14 C 0.07 0.10 9.89 83.00 0.82 0.92 16 15 C -0.22 -1.27 5.58 -18.62 -0.10 -1.37 16 16 C -0.05 -0.23 3.06 71.24 0.22 -0.01 16 17 O -0.55 -3.78 12.88 -148.98 -1.92 -5.70 16 18 Si 0.76 -0.11 30.82 68.60 2.11 2.01 16 19 C -0.12 -1.17 6.35 -20.20 -0.13 -1.30 16 20 C -0.09 -0.87 10.05 22.23 0.22 -0.65 16 21 C -0.15 -1.07 9.97 22.03 0.22 -0.85 16 22 C -0.11 -0.55 10.01 22.30 0.22 -0.32 16 23 C -0.13 -0.70 10.00 22.37 0.22 -0.47 16 24 C 0.09 0.66 6.79 39.03 0.27 0.93 16 25 C -0.12 0.33 5.49 30.58 0.17 0.49 16 26 C -0.10 0.08 5.16 30.58 0.16 0.23 16 27 H 0.24 -0.96 7.80 -4.42 -0.03 -1.00 16 28 H 0.06 -0.12 8.14 -2.39 -0.02 -0.13 16 29 H 0.08 -0.45 8.14 -2.38 -0.02 -0.47 16 30 H 0.09 -0.88 8.14 -2.38 -0.02 -0.90 16 31 H 0.09 -1.20 8.14 -2.39 -0.02 -1.22 16 32 H 0.42 -6.64 8.60 -92.71 -0.80 -7.44 16 33 H 0.14 -1.77 8.14 -2.39 -0.02 -1.78 16 34 H 0.16 -2.52 8.12 -2.39 -0.02 -2.54 16 35 H 0.20 -1.09 6.27 -2.91 -0.02 -1.11 16 36 H 0.10 0.58 7.96 -2.39 -0.02 0.56 16 37 H 0.38 0.03 8.70 -74.05 -0.64 -0.61 16 38 H -0.30 -2.29 7.11 99.48 0.71 -1.58 16 39 H -0.26 0.11 7.00 99.48 0.70 0.80 16 40 H 0.12 1.06 8.06 -2.91 -0.02 1.04 16 41 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 42 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 43 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 44 H 0.09 -0.54 8.14 -2.39 -0.02 -0.55 16 45 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 47 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 Total: 0.00 -27.22 393.99 2.04 -25.19 By element: Atomic # 1 Polarization: -16.39 SS G_CDS: -0.44 Total: -16.83 kcal Atomic # 6 Polarization: -6.51 SS G_CDS: 5.75 Total: -0.76 kcal Atomic # 7 Polarization: 5.06 SS G_CDS: -3.43 Total: 1.63 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: -1.97 Total: -11.24 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.11 Total: 2.01 kcal Total: -27.22 2.04 -25.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_9818708.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.180 kcal (2) G-P(sol) polarization free energy of solvation -27.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds