Wall clock time and date at job start Tue Mar 9 2021 13:00:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35990 * 117.00065 * 2 1 4 4 C 1.38671 * 119.99949 * 179.97438 * 3 2 1 5 5 C 1.38155 * 119.99982 * 180.02562 * 4 3 2 6 6 C 1.50703 * 120.00033 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.46820 * 254.97824 * 6 5 4 8 8 Si 1.86296 * 109.47157 * 14.97529 * 6 5 4 9 9 C 1.38676 * 119.99987 * 359.97438 * 5 4 3 10 10 O 1.35972 * 119.99945 * 180.02562 * 9 5 4 11 11 C 1.42907 * 117.00083 * 180.02562 * 10 9 5 12 12 C 1.50697 * 109.47162 * 180.02562 * 11 10 9 13 13 O 1.21279 * 120.00307 * 0.02562 * 12 11 10 14 14 N 1.34776 * 119.99843 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00090 * 185.01857 * 14 12 11 16 16 C 1.50708 * 112.84698 * 294.68905 * 15 14 12 17 17 C 1.38234 * 119.99659 * 313.51202 * 16 15 14 18 18 C 1.38238 * 119.99414 * 179.78805 * 17 16 15 19 19 C 1.38233 * 120.00531 * 0.46834 * 18 17 16 20 20 C 1.38246 * 119.99526 * 359.76626 * 19 18 17 21 21 C 1.38232 * 119.99809 * 133.79082 * 16 15 14 22 22 C 1.53783 * 113.61547 * 163.49554 * 15 14 12 23 23 C 1.53781 * 87.07583 * 270.79721 * 22 15 14 24 24 H 1.09004 * 113.61132 * 219.93283 * 23 22 15 25 25 O 1.42904 * 113.61720 * 89.11836 * 23 22 15 26 26 C 1.53775 * 113.69100 * 65.95469 * 15 14 12 27 27 C 1.38720 * 119.99569 * 0.27831 * 9 5 4 28 28 C 1.38115 * 120.00241 * 359.44801 * 27 9 5 29 29 H 1.09000 * 109.47018 * 60.00060 * 1 2 3 30 30 H 1.08996 * 109.47517 * 180.02562 * 1 2 3 31 31 H 1.09007 * 109.47501 * 300.00374 * 1 2 3 32 32 H 1.08003 * 120.00011 * 0.04039 * 4 3 2 33 33 H 1.08992 * 109.47044 * 134.97593 * 6 5 4 34 34 H 0.96704 * 113.99967 * 299.99949 * 7 6 5 35 35 H 1.48498 * 110.00420 * 60.00275 * 8 6 5 36 36 H 1.48500 * 110.00103 * 181.32081 * 8 6 5 37 37 H 1.09001 * 109.46701 * 60.00396 * 11 10 9 38 38 H 1.08997 * 109.47323 * 300.00678 * 11 10 9 39 39 H 0.97000 * 120.00143 * 5.01879 * 14 12 11 40 40 H 1.07997 * 120.00521 * 0.02562 * 17 16 15 41 41 H 1.08002 * 119.99793 * 180.25656 * 18 17 16 42 42 H 1.07993 * 120.00756 * 179.78952 * 19 18 17 43 43 H 1.07996 * 119.99979 * 179.97438 * 20 19 18 44 44 H 1.08002 * 120.00235 * 359.97438 * 21 16 15 45 45 H 1.08992 * 113.61588 * 25.34324 * 22 15 14 46 46 H 1.09000 * 113.61230 * 156.16910 * 22 15 14 47 47 H 0.96692 * 114.00077 * 179.97438 * 25 23 22 48 48 H 1.09005 * 113.61497 * 203.67544 * 26 15 14 49 49 H 1.08994 * 113.61830 * 334.58263 * 26 15 14 50 50 H 1.08001 * 119.99443 * 179.69759 * 27 9 5 51 51 H 1.07999 * 119.99469 * 180.25528 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0584 2.5152 0.0011 6 6 5.5634 2.5940 0.0011 7 8 6.0207 2.9671 1.3025 8 14 6.2723 0.9323 -0.4535 9 6 3.3031 3.6782 0.0005 10 8 3.9204 4.8897 0.0005 11 6 3.0805 6.0459 0.0005 12 6 3.9347 7.2874 -0.0001 13 8 5.1437 7.1916 -0.0010 14 7 3.3551 8.5041 0.0003 15 6 4.1810 9.7090 -0.1113 16 6 5.0884 9.9084 1.0754 17 6 4.5897 9.7717 2.3574 18 6 5.4231 9.9503 3.4458 19 6 6.7527 10.2752 3.2524 20 6 7.2502 10.4167 1.9703 21 6 6.4179 10.2338 0.8819 22 6 3.3858 10.9675 -0.4971 23 6 3.6497 10.5887 -1.9639 24 1 3.8755 11.4433 -2.6017 25 8 2.6539 9.7284 -2.5211 26 6 4.8985 9.8431 -1.4648 27 6 1.9178 3.6056 0.0053 28 6 1.2908 2.3750 -0.0010 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 4.0194 0.3784 0.0003 33 1 5.8881 3.3387 -0.7255 34 1 5.6900 3.8240 1.6049 35 1 5.8041 0.5328 -1.8050 36 1 7.7560 0.9883 -0.4261 37 1 2.4513 6.0378 0.8906 38 1 2.4512 6.0378 -0.8894 39 1 2.3911 8.5822 0.0745 40 1 3.5501 9.5215 2.5086 41 1 5.0345 9.8394 4.4473 42 1 7.4029 10.4181 4.1027 43 1 8.2888 10.6709 1.8192 44 1 6.8065 10.3446 -0.1197 45 1 2.3335 10.9219 -0.2169 46 1 3.8653 11.8975 -0.1919 47 1 2.8142 9.4870 -3.4436 48 1 5.7923 10.4659 -1.4254 49 1 5.0674 8.8900 -1.9658 50 1 1.3297 4.5113 0.0098 51 1 0.2123 2.3185 -0.0014 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891110_4974302.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:20 Heat of formation + Delta-G solvation = -86.736142 kcal Electronic energy + Delta-G solvation = -36471.463267 eV Core-core repulsion = 31691.020918 eV Total energy + Delta-G solvation = -4780.442349 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.17633 -41.69853 -40.35632 -39.57793 -39.18632 -38.10164 -36.95258 -36.21599 -34.14739 -32.83303 -31.89907 -31.73589 -31.00728 -29.40905 -27.97296 -27.09592 -26.61406 -25.70256 -23.85345 -23.37292 -22.60732 -22.42072 -21.67244 -20.38659 -19.52953 -18.81485 -18.64643 -18.51477 -18.07709 -17.89411 -17.42975 -17.38023 -17.02098 -16.61167 -16.32263 -16.09423 -15.85216 -15.68374 -15.59036 -15.46505 -15.35772 -15.10162 -14.92971 -14.49954 -14.32798 -14.18549 -14.11749 -13.74404 -13.65819 -13.54903 -13.49512 -13.35337 -13.05077 -12.96972 -12.53097 -12.45174 -12.31785 -12.07187 -12.04599 -11.89905 -11.53146 -11.46360 -11.32760 -11.25700 -11.02495 -10.83246 -10.13752 -10.11692 -9.86173 -9.63918 -8.84154 -4.95636 0.04262 0.31331 0.36165 0.45773 1.31311 1.41194 1.48717 1.56041 1.89325 2.33275 2.51315 2.53508 2.80119 3.06154 3.41327 3.43621 3.50917 3.56783 3.64011 3.71662 3.82015 3.83059 3.92087 4.03203 4.05724 4.07319 4.08647 4.11301 4.18995 4.20610 4.25925 4.34178 4.44024 4.44314 4.57507 4.59924 4.66942 4.68255 4.74961 4.78862 4.84738 4.92132 4.95472 4.96087 5.04141 5.10715 5.10980 5.18623 5.39026 5.41070 5.52094 5.58307 5.66972 6.06112 6.11261 6.40667 6.46057 6.47763 6.78951 7.15266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.314 6.314 11 C 0.040 3.960 12 C 0.516 3.484 13 O -0.554 6.554 14 N -0.681 5.681 15 C 0.195 3.805 16 C -0.082 4.082 17 C -0.118 4.118 18 C -0.131 4.131 19 C -0.133 4.133 20 C -0.132 4.132 21 C -0.121 4.121 22 C -0.115 4.115 23 C 0.088 3.912 24 H 0.090 0.910 25 O -0.559 6.559 26 C -0.177 4.177 27 C -0.160 4.160 28 C -0.161 4.161 29 H 0.066 0.934 30 H 0.115 0.885 31 H 0.067 0.933 32 H 0.153 0.847 33 H 0.060 0.940 34 H 0.370 0.630 35 H -0.263 1.263 36 H -0.294 1.294 37 H 0.120 0.880 38 H 0.118 0.882 39 H 0.418 0.582 40 H 0.130 0.870 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.133 0.867 44 H 0.128 0.872 45 H 0.096 0.904 46 H 0.120 0.880 47 H 0.396 0.604 48 H 0.106 0.894 49 H 0.058 0.942 50 H 0.164 0.836 51 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.382 3.515 -0.853 10.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.246 6.246 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.228 6.228 11 C -0.038 4.038 12 C 0.302 3.698 13 O -0.430 6.430 14 N -0.335 5.335 15 C 0.109 3.891 16 C -0.083 4.083 17 C -0.136 4.136 18 C -0.149 4.149 19 C -0.151 4.151 20 C -0.150 4.150 21 C -0.139 4.139 22 C -0.153 4.153 23 C 0.029 3.971 24 H 0.108 0.892 25 O -0.367 6.367 26 C -0.215 4.215 27 C -0.179 4.179 28 C -0.179 4.179 29 H 0.084 0.916 30 H 0.133 0.867 31 H 0.086 0.914 32 H 0.170 0.830 33 H 0.078 0.922 34 H 0.219 0.781 35 H -0.188 1.188 36 H -0.221 1.221 37 H 0.138 0.862 38 H 0.135 0.865 39 H 0.256 0.744 40 H 0.148 0.852 41 H 0.154 0.846 42 H 0.152 0.848 43 H 0.151 0.849 44 H 0.146 0.854 45 H 0.114 0.886 46 H 0.138 0.862 47 H 0.246 0.754 48 H 0.124 0.876 49 H 0.077 0.923 50 H 0.181 0.819 51 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.733 2.347 -0.887 8.130 hybrid contribution -0.406 1.811 -0.786 2.015 sum -8.139 4.158 -1.673 9.291 Atomic orbital electron populations 1.23357 0.76380 1.05636 1.02352 1.86088 1.23388 1.26222 1.88920 1.18960 0.91916 0.85344 0.99154 1.20181 0.92437 0.96749 1.04229 1.19450 0.95993 0.90971 1.05529 1.25537 0.92865 1.12555 0.87927 1.86657 1.74213 1.42153 1.32043 0.92221 0.76232 0.78956 0.81301 1.18816 0.91738 0.84292 1.00742 1.86084 1.35445 1.11874 1.89400 1.22652 0.92676 0.82153 1.06302 1.20376 0.88435 0.85037 0.75966 1.90776 1.16169 1.87096 1.48989 1.45231 1.10897 1.03074 1.74275 1.19930 0.91494 0.86015 0.91704 1.19904 0.94348 0.99616 0.94437 1.21095 1.00360 1.00096 0.92019 1.21417 0.94129 0.99692 0.99644 1.21451 0.96203 0.99793 0.97671 1.21412 1.00458 1.00215 0.92913 1.21265 0.93319 0.99795 0.99501 1.23389 1.01859 0.96289 0.93727 1.22658 0.87119 0.92344 0.94988 0.89182 1.86354 1.48347 1.68995 1.33019 1.24139 0.99543 1.01755 0.96058 1.21354 0.92093 0.99983 1.04436 1.21412 1.01595 0.90889 1.04043 0.91560 0.86681 0.91439 0.82987 0.92244 0.78126 1.18815 1.22134 0.86220 0.86462 0.74368 0.85245 0.84644 0.84785 0.84936 0.85402 0.88573 0.86184 0.75435 0.87567 0.92350 0.81856 0.82111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.86 10.50 -93.44 -0.98 -1.84 16 3 C 0.09 0.31 6.68 22.49 0.15 0.46 16 4 C -0.12 -0.61 8.59 22.35 0.19 -0.42 16 5 C -0.12 -0.84 5.28 -19.78 -0.10 -0.94 16 6 C -0.08 -0.75 2.33 71.24 0.17 -0.59 16 7 O -0.54 -6.11 12.65 -148.98 -1.89 -8.00 16 8 Si 0.81 4.91 30.17 68.60 2.07 6.98 16 9 C 0.09 0.43 6.62 22.49 0.15 0.58 16 10 O -0.31 -1.95 8.56 -74.20 -0.64 -2.58 16 11 C 0.04 -0.07 5.22 71.23 0.37 0.30 16 12 C 0.52 1.96 7.40 87.66 0.65 2.61 16 13 O -0.55 -7.84 15.29 16.01 0.24 -7.59 16 14 N -0.68 1.32 4.37 -423.92 -1.85 -0.53 16 15 C 0.20 -0.05 0.81 3.38 0.00 -0.05 16 16 C -0.08 -0.33 4.24 -19.86 -0.08 -0.41 16 17 C -0.12 -0.41 9.47 22.27 0.21 -0.20 16 18 C -0.13 -0.51 10.05 22.27 0.22 -0.28 16 19 C -0.13 -0.61 10.05 22.27 0.22 -0.38 16 20 C -0.13 -0.69 10.05 22.27 0.22 -0.47 16 21 C -0.12 -0.66 9.22 22.27 0.21 -0.46 16 22 C -0.12 0.57 7.19 31.12 0.22 0.79 16 23 C 0.09 -0.41 5.28 31.12 0.16 -0.25 16 24 H 0.09 -0.67 8.14 -2.38 -0.02 -0.69 16 25 O -0.56 2.56 13.09 -148.98 -1.95 0.61 16 26 C -0.18 -0.01 6.38 31.12 0.20 0.19 16 27 C -0.16 0.15 9.03 22.36 0.20 0.35 16 28 C -0.16 0.14 9.03 22.35 0.20 0.34 16 29 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 30 H 0.11 -0.93 8.14 -2.39 -0.02 -0.95 16 31 H 0.07 -0.51 7.66 -2.38 -0.02 -0.53 16 32 H 0.15 0.34 5.13 -2.91 -0.01 0.33 16 33 H 0.06 0.71 7.82 -2.39 -0.02 0.69 16 34 H 0.37 3.43 8.60 -74.05 -0.64 2.79 16 35 H -0.26 -2.03 7.11 99.48 0.71 -1.33 16 36 H -0.29 -3.61 7.11 99.48 0.71 -2.90 16 37 H 0.12 -0.93 7.65 -2.39 -0.02 -0.95 16 38 H 0.12 -0.80 7.67 -2.39 -0.02 -0.82 16 39 H 0.42 -3.21 8.66 -92.71 -0.80 -4.02 16 40 H 0.13 -0.05 8.02 -2.91 -0.02 -0.07 16 41 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 42 H 0.13 0.12 8.06 -2.91 -0.02 0.10 16 43 H 0.13 0.25 8.06 -2.91 -0.02 0.23 16 44 H 0.13 0.43 5.71 -2.91 -0.02 0.41 16 45 H 0.10 -0.63 8.09 -2.39 -0.02 -0.65 16 46 H 0.12 -0.75 8.09 -2.39 -0.02 -0.77 16 47 H 0.40 -4.02 9.12 -74.06 -0.68 -4.70 16 48 H 0.11 -0.11 5.86 -2.38 -0.01 -0.12 16 49 H 0.06 0.31 7.57 -2.39 -0.02 0.29 16 50 H 0.16 -1.30 6.29 -2.91 -0.02 -1.31 16 51 H 0.16 -1.08 6.29 -2.91 -0.02 -1.10 16 Total: 0.00 -26.01 417.92 -1.37 -27.38 By element: Atomic # 1 Polarization: -15.55 SS G_CDS: -1.06 Total: -16.62 kcal Atomic # 6 Polarization: -2.50 SS G_CDS: 4.68 Total: 2.19 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -1.85 Total: -0.53 kcal Atomic # 8 Polarization: -14.19 SS G_CDS: -5.21 Total: -19.40 kcal Atomic # 14 Polarization: 4.91 SS G_CDS: 2.07 Total: 6.98 kcal Total: -26.01 -1.37 -27.38 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_4974302.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.357 kcal (2) G-P(sol) polarization free energy of solvation -26.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds