Wall clock time and date at job start Tue Mar 9 2021 13:01:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47066 * 2 1 4 4 C 1.50703 * 109.46905 * 240.00115 * 2 1 3 5 5 C 1.35453 * 126.06726 * 119.98153 * 4 2 1 6 6 N 1.35523 * 108.87220 * 179.78409 * 5 4 2 7 7 C 1.37646 * 108.64764 * 0.37643 * 6 5 4 8 8 C 1.46676 * 126.23885 * 179.89060 * 7 6 5 9 9 O 1.21690 * 120.00396 * 179.68907 * 8 7 6 10 10 N 1.34781 * 119.99729 * 359.68365 * 8 7 6 11 11 C 1.46496 * 119.99775 * 179.97438 * 10 8 7 12 12 H 1.08996 * 109.47565 * 325.00106 * 11 10 8 13 13 C 1.53002 * 109.47037 * 85.00675 * 11 10 8 14 14 C 1.53006 * 109.46977 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47127 * 299.99541 * 14 13 11 16 16 H 1.09002 * 109.47153 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.47319 * 300.00438 * 15 14 13 18 18 C 1.53002 * 109.46817 * 60.00361 * 15 14 13 19 19 C 1.52996 * 109.46972 * 299.99733 * 18 15 14 20 20 C 1.37874 * 107.52883 * 359.62576 * 7 6 5 21 21 H 0.96704 * 113.99890 * 60.00113 * 1 2 3 22 22 H 1.09002 * 109.46925 * 120.00449 * 2 1 3 23 23 H 1.48496 * 110.00311 * 298.68220 * 3 2 1 24 24 H 1.48500 * 109.99840 * 60.00270 * 3 2 1 25 25 H 1.07998 * 125.56133 * 359.97207 * 5 4 2 26 26 H 0.97010 * 125.67851 * 180.25954 * 6 5 4 27 27 H 0.96996 * 120.00159 * 0.02562 * 10 8 7 28 28 H 1.09000 * 109.46986 * 299.99564 * 13 11 10 29 29 H 1.08993 * 109.47662 * 59.99787 * 13 11 10 30 30 H 1.08998 * 109.46505 * 179.97438 * 14 13 11 31 31 H 1.08996 * 109.46884 * 60.00293 * 14 13 11 32 32 H 0.96708 * 113.99549 * 300.00230 * 17 15 14 33 33 H 1.08996 * 109.47407 * 60.00219 * 18 15 14 34 34 H 1.09000 * 109.46986 * 179.97438 * 18 15 14 35 35 H 1.09001 * 109.46993 * 180.02562 * 19 18 15 36 36 H 1.09004 * 109.47298 * 300.00176 * 19 18 15 37 37 H 1.08001 * 126.45392 * 180.19133 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7129 -0.1738 -2.1979 6 7 2.9596 -1.1194 -3.1369 7 6 2.3185 -2.2811 -2.7707 8 6 2.3261 -3.5465 -3.5124 9 8 1.7214 -4.5095 -3.0790 10 7 3.0027 -3.6426 -4.6741 11 6 3.0107 -4.9065 -5.4146 12 1 3.0090 -5.7396 -4.7117 13 6 1.7670 -4.9855 -6.3022 14 6 1.7757 -6.3053 -7.0761 15 6 3.0303 -6.3765 -7.9489 16 1 3.0363 -7.3166 -8.5006 17 8 3.0324 -5.2841 -8.8701 18 6 4.2740 -6.2976 -7.0613 19 6 4.2654 -4.9778 -6.2874 20 6 1.6729 -2.0404 -1.5764 21 1 -0.3933 0.4417 -0.7651 22 1 1.7923 -0.5139 0.8900 23 1 1.5879 2.4586 -1.2242 24 1 1.5615 2.4678 1.2085 25 1 3.0820 0.8410 -2.2162 26 1 3.4971 -0.9973 -3.9352 27 1 3.4850 -2.8751 -5.0194 28 1 0.8731 -4.9343 -5.6805 29 1 1.7687 -4.1525 -7.0052 30 1 0.8894 -6.3617 -7.7081 31 1 1.7740 -7.1385 -6.3734 32 1 2.2707 -5.2705 -9.4658 33 1 4.2725 -7.1309 -6.3587 34 1 5.1679 -6.3488 -7.6830 35 1 5.1517 -4.9214 -5.6554 36 1 4.2669 -4.1445 -6.9901 37 1 1.0790 -2.7459 -1.0144 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_10543058.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:28 Heat of formation + Delta-G solvation = -78.928843 kcal Electronic energy + Delta-G solvation = -20435.071638 eV Core-core repulsion = 17179.112252 eV Total energy + Delta-G solvation = -3255.959386 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.48429 -40.86055 -39.45350 -37.73790 -36.69507 -34.40204 -32.56440 -31.92471 -30.96236 -29.54194 -26.49636 -24.53997 -23.88723 -22.72244 -21.31142 -21.02129 -20.67040 -19.87349 -17.89076 -17.71640 -17.19228 -17.04978 -16.53396 -16.28394 -15.94824 -15.69464 -15.52182 -14.88445 -14.64447 -14.48877 -14.40333 -14.05964 -13.78628 -13.53597 -13.44052 -13.29901 -13.12051 -12.54763 -12.39035 -12.12442 -11.80158 -11.67714 -11.36454 -11.15074 -10.79212 -10.49202 -10.14763 -9.93926 -9.30033 -4.95324 0.42924 1.32012 1.56675 1.61049 1.93248 2.02473 2.06420 2.40284 3.20780 3.50705 3.56842 3.63063 3.80924 3.87615 3.90528 3.97941 4.03909 4.13265 4.30649 4.37087 4.39569 4.41027 4.55263 4.73911 4.80757 4.84224 4.92021 4.95182 5.05903 5.06720 5.08086 5.19051 5.26633 5.43026 5.61012 5.81043 6.21404 6.44854 6.55717 6.62062 7.15934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.040 4.040 3 Si 0.682 3.318 4 C -0.209 4.209 5 C 0.035 3.965 6 N -0.535 5.535 7 C -0.058 4.058 8 C 0.590 3.410 9 O -0.524 6.524 10 N -0.728 5.728 11 C 0.148 3.852 12 H 0.090 0.910 13 C -0.125 4.125 14 C -0.150 4.150 15 C 0.102 3.898 16 H 0.058 0.942 17 O -0.565 6.565 18 C -0.109 4.109 19 C -0.123 4.123 20 C -0.076 4.076 21 H 0.374 0.626 22 H 0.115 0.885 23 H -0.260 1.260 24 H -0.258 1.258 25 H 0.176 0.824 26 H 0.418 0.582 27 H 0.393 0.607 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.076 0.924 32 H 0.378 0.622 33 H 0.080 0.920 34 H 0.076 0.924 35 H 0.068 0.932 36 H 0.077 0.923 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.359 1.977 -4.082 6.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.151 4.151 3 Si 0.584 3.416 4 C -0.216 4.216 5 C -0.101 4.101 6 N -0.131 5.131 7 C -0.171 4.171 8 C 0.378 3.622 9 O -0.400 6.400 10 N -0.379 5.379 11 C 0.044 3.956 12 H 0.108 0.892 13 C -0.163 4.163 14 C -0.189 4.189 15 C 0.043 3.957 16 H 0.076 0.924 17 O -0.371 6.371 18 C -0.147 4.147 19 C -0.161 4.161 20 C -0.102 4.102 21 H 0.222 0.778 22 H 0.133 0.867 23 H -0.185 1.185 24 H -0.183 1.183 25 H 0.193 0.807 26 H 0.256 0.744 27 H 0.227 0.773 28 H 0.086 0.914 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.094 0.906 32 H 0.225 0.775 33 H 0.098 0.902 34 H 0.095 0.905 35 H 0.087 0.913 36 H 0.095 0.905 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.440 1.889 -3.046 5.706 hybrid contribution -1.148 0.160 -1.399 1.817 sum 3.292 2.049 -4.445 5.899 Atomic orbital electron populations 1.86606 1.18059 1.79846 1.49111 1.24333 0.83370 1.09936 0.97420 0.95466 0.91256 0.74532 0.80395 1.19845 1.06467 0.95789 0.99523 1.21868 1.02646 0.94937 0.90683 1.41932 1.40395 1.09766 1.21022 1.20443 1.08384 0.87576 1.00665 1.17059 0.78869 0.86267 0.80002 1.90871 1.43540 1.37323 1.68261 1.45959 1.53619 1.15041 1.23263 1.21030 0.95280 0.86249 0.93078 0.89217 1.21817 0.98096 0.98067 0.98366 1.22222 0.98417 0.98549 0.99695 1.21817 0.94838 0.89336 0.89722 0.92385 1.86496 1.49953 1.49923 1.50691 1.21493 0.97592 0.97703 0.97889 1.21717 0.96655 0.99360 0.98365 1.21219 0.99388 0.95738 0.93897 0.77846 0.86693 1.18528 1.18319 0.80711 0.74427 0.77324 0.91398 0.91158 0.91218 0.90571 0.77511 0.90187 0.90542 0.91295 0.90451 0.83214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.10 12.88 -35.23 -0.45 -1.55 16 2 C -0.04 -0.01 3.02 36.01 0.11 0.10 16 3 Si 0.68 -1.02 30.59 -169.99 -5.20 -6.22 16 4 C -0.21 -0.08 5.44 -105.02 -0.57 -0.65 16 5 C 0.04 -0.07 10.45 -16.92 -0.18 -0.25 16 6 N -0.54 1.15 5.99 -9.39 -0.06 1.09 16 7 C -0.06 -0.08 7.06 -81.98 -0.58 -0.66 16 8 C 0.59 1.60 7.75 -12.85 -0.10 1.50 16 9 O -0.52 -3.52 16.55 5.20 0.09 -3.44 16 10 N -0.73 0.31 5.07 -55.12 -0.28 0.03 16 11 C 0.15 0.00 2.45 -67.93 -0.17 -0.17 16 12 H 0.09 0.16 7.58 -51.93 -0.39 -0.24 16 13 C -0.12 -0.01 5.35 -26.73 -0.14 -0.16 16 14 C -0.15 0.17 5.64 -26.73 -0.15 0.02 16 15 C 0.10 -0.14 3.77 -26.73 -0.10 -0.24 16 16 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 17 O -0.56 0.39 11.97 -35.23 -0.42 -0.03 16 18 C -0.11 0.15 5.66 -26.73 -0.15 0.00 16 19 C -0.12 0.17 5.24 -26.73 -0.14 0.03 16 20 C -0.08 -0.19 10.59 -39.12 -0.41 -0.61 16 21 H 0.37 -0.31 8.70 45.56 0.40 0.08 16 22 H 0.12 -0.01 7.96 -51.93 -0.41 -0.43 16 23 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 24 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 25 H 0.18 -0.86 6.19 -52.49 -0.32 -1.19 16 26 H 0.42 -2.27 8.19 -40.82 -0.33 -2.61 16 27 H 0.39 -1.28 7.73 -40.82 -0.32 -1.60 16 28 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 29 H 0.07 0.01 7.68 -51.93 -0.40 -0.39 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.38 -1.46 9.08 45.56 0.41 -1.05 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 36 H 0.08 -0.07 7.68 -51.93 -0.40 -0.47 16 37 H 0.15 0.54 8.06 -52.49 -0.42 0.11 16 LS Contribution 305.52 15.07 4.60 4.60 Total: 0.00 -9.02 305.52 -8.65 -17.67 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -4.35 Total: -11.09 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -2.58 Total: -1.07 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.34 Total: 1.12 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -0.79 Total: -5.02 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.20 Total: -6.22 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -9.02 -8.65 -17.67 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10543058.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.255 kcal (2) G-P(sol) polarization free energy of solvation -9.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds