Wall clock time and date at job start Tue Mar 9 2021 13:01:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47066 * 2 1 4 4 C 1.50703 * 109.46905 * 240.00115 * 2 1 3 5 5 C 1.35453 * 126.06726 * 119.98153 * 4 2 1 6 6 N 1.35523 * 108.87220 * 179.78409 * 5 4 2 7 7 C 1.37646 * 108.64764 * 0.37643 * 6 5 4 8 8 C 1.46676 * 126.23885 * 179.89060 * 7 6 5 9 9 O 1.21690 * 120.00396 * 179.68907 * 8 7 6 10 10 N 1.34781 * 119.99729 * 359.68365 * 8 7 6 11 11 C 1.46496 * 119.99775 * 179.97438 * 10 8 7 12 12 H 1.08996 * 109.47565 * 325.00106 * 11 10 8 13 13 C 1.53002 * 109.47037 * 85.00675 * 11 10 8 14 14 C 1.53006 * 109.46977 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47127 * 299.99541 * 14 13 11 16 16 H 1.09002 * 109.47153 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.47319 * 300.00438 * 15 14 13 18 18 C 1.53002 * 109.46817 * 60.00361 * 15 14 13 19 19 C 1.52996 * 109.46972 * 299.99733 * 18 15 14 20 20 C 1.37874 * 107.52883 * 359.62576 * 7 6 5 21 21 H 0.96704 * 113.99890 * 60.00113 * 1 2 3 22 22 H 1.09002 * 109.46925 * 120.00449 * 2 1 3 23 23 H 1.48496 * 110.00311 * 298.68220 * 3 2 1 24 24 H 1.48500 * 109.99840 * 60.00270 * 3 2 1 25 25 H 1.07998 * 125.56133 * 359.97207 * 5 4 2 26 26 H 0.97010 * 125.67851 * 180.25954 * 6 5 4 27 27 H 0.96996 * 120.00159 * 0.02562 * 10 8 7 28 28 H 1.09000 * 109.46986 * 299.99564 * 13 11 10 29 29 H 1.08993 * 109.47662 * 59.99787 * 13 11 10 30 30 H 1.08998 * 109.46505 * 179.97438 * 14 13 11 31 31 H 1.08996 * 109.46884 * 60.00293 * 14 13 11 32 32 H 0.96708 * 113.99549 * 300.00230 * 17 15 14 33 33 H 1.08996 * 109.47407 * 60.00219 * 18 15 14 34 34 H 1.09000 * 109.46986 * 179.97438 * 18 15 14 35 35 H 1.09001 * 109.46993 * 180.02562 * 19 18 15 36 36 H 1.09004 * 109.47298 * 300.00176 * 19 18 15 37 37 H 1.08001 * 126.45392 * 180.19133 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7129 -0.1738 -2.1979 6 7 2.9596 -1.1194 -3.1369 7 6 2.3185 -2.2811 -2.7707 8 6 2.3261 -3.5465 -3.5124 9 8 1.7214 -4.5095 -3.0790 10 7 3.0027 -3.6426 -4.6741 11 6 3.0107 -4.9065 -5.4146 12 1 3.0090 -5.7396 -4.7117 13 6 1.7670 -4.9855 -6.3022 14 6 1.7757 -6.3053 -7.0761 15 6 3.0303 -6.3765 -7.9489 16 1 3.0363 -7.3166 -8.5006 17 8 3.0324 -5.2841 -8.8701 18 6 4.2740 -6.2976 -7.0613 19 6 4.2654 -4.9778 -6.2874 20 6 1.6729 -2.0404 -1.5764 21 1 -0.3933 0.4417 -0.7651 22 1 1.7923 -0.5139 0.8900 23 1 1.5879 2.4586 -1.2242 24 1 1.5615 2.4678 1.2085 25 1 3.0820 0.8410 -2.2162 26 1 3.4971 -0.9973 -3.9352 27 1 3.4850 -2.8751 -5.0194 28 1 0.8731 -4.9343 -5.6805 29 1 1.7687 -4.1525 -7.0052 30 1 0.8894 -6.3617 -7.7081 31 1 1.7740 -7.1385 -6.3734 32 1 2.2707 -5.2705 -9.4658 33 1 4.2725 -7.1309 -6.3587 34 1 5.1679 -6.3488 -7.6830 35 1 5.1517 -4.9214 -5.6554 36 1 4.2669 -4.1445 -6.9901 37 1 1.0790 -2.7459 -1.0144 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_10543058.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:27 Heat of formation + Delta-G solvation = -83.922312 kcal Electronic energy + Delta-G solvation = -20435.288171 eV Core-core repulsion = 17179.112252 eV Total energy + Delta-G solvation = -3256.175919 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.50419 -40.90656 -39.52470 -37.80992 -36.73517 -34.44577 -32.57020 -31.86923 -31.00951 -29.53212 -26.50606 -24.58068 -23.83378 -22.73397 -21.38016 -21.01233 -20.66805 -19.88138 -17.82196 -17.76025 -17.25560 -17.07417 -16.58020 -16.28655 -16.00192 -15.69694 -15.54008 -14.94794 -14.64616 -14.53058 -14.37859 -14.05657 -13.85457 -13.55799 -13.46404 -13.25259 -13.08870 -12.49591 -12.45213 -12.08212 -11.82566 -11.66038 -11.40496 -11.26356 -10.73312 -10.51710 -10.26250 -9.95908 -9.30647 -4.84379 0.34405 1.37541 1.56756 1.69053 1.90803 2.09098 2.13031 2.23641 3.37178 3.53448 3.60109 3.69299 3.82726 3.95200 3.97878 4.03556 4.16404 4.18670 4.34880 4.36165 4.41626 4.47694 4.60164 4.72901 4.84551 4.90095 4.93654 5.01244 5.02083 5.10778 5.11019 5.21930 5.29345 5.41692 5.57507 5.72220 6.33585 6.50001 6.62014 6.87855 7.03392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.062 4.062 3 Si 0.791 3.209 4 C -0.225 4.225 5 C 0.061 3.939 6 N -0.515 5.515 7 C -0.071 4.071 8 C 0.588 3.412 9 O -0.576 6.576 10 N -0.711 5.711 11 C 0.148 3.852 12 H 0.069 0.931 13 C -0.119 4.119 14 C -0.148 4.148 15 C 0.104 3.896 16 H 0.067 0.933 17 O -0.578 6.578 18 C -0.114 4.114 19 C -0.113 4.113 20 C -0.105 4.105 21 H 0.384 0.616 22 H 0.109 0.891 23 H -0.270 1.270 24 H -0.313 1.313 25 H 0.216 0.784 26 H 0.437 0.563 27 H 0.410 0.590 28 H 0.041 0.959 29 H 0.074 0.926 30 H 0.077 0.923 31 H 0.071 0.929 32 H 0.390 0.610 33 H 0.084 0.916 34 H 0.079 0.921 35 H 0.076 0.924 36 H 0.079 0.921 37 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.954 3.504 -5.589 8.886 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.170 4.170 3 Si 0.695 3.305 4 C -0.231 4.231 5 C -0.077 4.077 6 N -0.112 5.112 7 C -0.184 4.184 8 C 0.377 3.623 9 O -0.456 6.456 10 N -0.362 5.362 11 C 0.044 3.956 12 H 0.087 0.913 13 C -0.158 4.158 14 C -0.186 4.186 15 C 0.046 3.954 16 H 0.085 0.915 17 O -0.386 6.386 18 C -0.151 4.151 19 C -0.151 4.151 20 C -0.132 4.132 21 H 0.233 0.767 22 H 0.127 0.873 23 H -0.196 1.196 24 H -0.242 1.242 25 H 0.233 0.767 26 H 0.278 0.722 27 H 0.246 0.754 28 H 0.060 0.940 29 H 0.092 0.908 30 H 0.096 0.904 31 H 0.090 0.910 32 H 0.240 0.760 33 H 0.102 0.898 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.097 0.903 37 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.071 3.405 -4.631 8.361 hybrid contribution -1.687 -0.312 -0.891 1.933 sum 4.384 3.094 -5.522 7.699 Atomic orbital electron populations 1.86566 1.19498 1.80543 1.49964 1.24787 0.82578 1.12295 0.97307 0.94295 0.89281 0.70270 0.76637 1.19893 1.07703 0.94961 1.00535 1.22390 1.00329 0.95963 0.89016 1.41869 1.39478 1.08382 1.21518 1.20127 1.09516 0.88220 1.00517 1.17290 0.78415 0.86153 0.80490 1.90838 1.45915 1.39126 1.69688 1.45818 1.52588 1.15624 1.22171 1.21021 0.96191 0.85681 0.92753 0.91322 1.21741 0.96948 0.99069 0.98050 1.22210 0.99234 0.97525 0.99650 1.21802 0.94366 0.89634 0.89630 0.91514 1.86459 1.50951 1.50138 1.51056 1.21557 0.97749 0.97785 0.98052 1.21639 0.95843 0.99565 0.98056 1.21217 1.00323 0.96776 0.94852 0.76701 0.87340 1.19557 1.24197 0.76729 0.72177 0.75379 0.94006 0.90780 0.90445 0.91017 0.76026 0.89779 0.90259 0.90539 0.90250 0.85903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.12 12.88 -148.98 -1.92 -5.04 16 2 C -0.06 -0.05 3.02 71.24 0.22 0.16 16 3 Si 0.79 -3.30 30.59 68.60 2.10 -1.20 16 4 C -0.22 -0.21 5.44 -20.12 -0.11 -0.32 16 5 C 0.06 -0.36 10.45 83.48 0.87 0.51 16 6 N -0.52 2.96 5.99 -183.63 -1.10 1.86 16 7 C -0.07 -0.26 7.06 40.35 0.28 0.03 16 8 C 0.59 4.22 7.75 86.45 0.67 4.89 16 9 O -0.58 -9.67 16.55 -4.32 -0.07 -9.74 16 10 N -0.71 0.23 5.07 -446.51 -2.27 -2.03 16 11 C 0.15 0.12 2.45 44.99 0.11 0.23 16 12 H 0.07 0.38 7.58 -2.39 -0.02 0.36 16 13 C -0.12 -0.15 5.35 30.60 0.16 0.01 16 14 C -0.15 0.27 5.64 30.60 0.17 0.44 16 15 C 0.10 -0.33 3.77 30.59 0.12 -0.21 16 16 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 17 O -0.58 1.30 11.97 -148.98 -1.78 -0.48 16 18 C -0.11 0.37 5.66 30.59 0.17 0.54 16 19 C -0.11 0.36 5.24 30.59 0.16 0.52 16 20 C -0.10 -0.75 10.59 22.57 0.24 -0.51 16 21 H 0.38 -0.25 8.70 -74.05 -0.64 -0.90 16 22 H 0.11 0.13 7.96 -2.39 -0.02 0.12 16 23 H -0.27 0.66 7.11 99.48 0.71 1.36 16 24 H -0.31 -1.62 7.11 99.48 0.71 -0.91 16 25 H 0.22 -3.04 6.19 -2.91 -0.02 -3.05 16 26 H 0.44 -5.84 8.19 -92.70 -0.76 -6.60 16 27 H 0.41 -3.01 7.73 -92.71 -0.72 -3.73 16 28 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 29 H 0.07 0.03 7.68 -2.39 -0.02 0.02 16 30 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 32 H 0.39 -3.35 9.08 -74.05 -0.67 -4.02 16 33 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 34 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 35 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 36 H 0.08 -0.25 7.68 -2.38 -0.02 -0.26 16 37 H 0.12 1.43 8.06 -2.91 -0.02 1.41 16 Total: 0.00 -24.40 305.52 -3.60 -28.00 By element: Atomic # 1 Polarization: -16.03 SS G_CDS: -1.63 Total: -17.66 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 3.07 Total: 6.29 kcal Atomic # 7 Polarization: 3.19 SS G_CDS: -3.37 Total: -0.17 kcal Atomic # 8 Polarization: -11.49 SS G_CDS: -3.77 Total: -15.27 kcal Atomic # 14 Polarization: -3.30 SS G_CDS: 2.10 Total: -1.20 kcal Total: -24.40 -3.60 -28.00 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_10543058.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.918 kcal (2) G-P(sol) polarization free energy of solvation -24.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds