Wall clock time and date at job start Tue Mar 9 2021 13:03:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35995 * 117.00287 * 2 1 4 4 C 1.38552 * 120.06376 * 359.97438 * 3 2 1 5 5 C 1.38271 * 120.02141 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.92901 * 180.02562 * 5 4 3 7 7 O 1.42905 * 109.46946 * 64.99567 * 6 5 4 8 8 Si 1.86294 * 109.47440 * 184.99728 * 6 5 4 9 9 C 1.38219 * 120.15125 * 359.97438 * 5 4 3 10 10 C 1.38375 * 120.13121 * 359.74739 * 9 5 4 11 11 Cl 1.73603 * 120.01146 * 180.27203 * 10 9 5 12 12 C 1.38624 * 119.98106 * 0.52891 * 10 9 5 13 13 O 1.36017 * 120.07928 * 179.74893 * 12 10 9 14 14 C 1.42905 * 117.00038 * 269.72252 * 13 12 10 15 15 C 1.52993 * 109.47255 * 270.00117 * 14 13 12 16 16 C 1.50700 * 109.47138 * 149.99841 * 14 13 12 17 17 O 1.21283 * 119.99803 * 5.00047 * 16 14 13 18 18 N 1.34777 * 119.99675 * 185.27922 * 16 14 13 19 19 C 1.46497 * 119.99525 * 179.72583 * 18 16 14 20 20 H 1.09001 * 109.47884 * 324.99780 * 19 18 16 21 21 C 1.53008 * 109.47335 * 84.99977 * 19 18 16 22 22 C 1.52998 * 109.47363 * 179.97438 * 21 19 18 23 23 C 1.52998 * 109.47164 * 300.00049 * 22 21 19 24 24 H 1.09003 * 109.47086 * 179.97438 * 23 22 21 25 25 O 1.42896 * 109.47091 * 299.99971 * 23 22 21 26 26 C 1.53005 * 109.47340 * 59.99924 * 23 22 21 27 27 C 1.52998 * 109.46681 * 300.00106 * 26 23 22 28 28 H 1.09009 * 109.46920 * 300.00041 * 1 2 3 29 29 H 1.09000 * 109.47592 * 59.99557 * 1 2 3 30 30 H 1.09000 * 109.47424 * 180.02562 * 1 2 3 31 31 H 1.08005 * 119.98964 * 0.02562 * 4 3 2 32 32 H 1.08999 * 109.46702 * 305.00347 * 6 5 4 33 33 H 0.96702 * 113.99489 * 60.00248 * 7 6 5 34 34 H 1.48498 * 110.00295 * 179.97438 * 8 6 5 35 35 H 1.48493 * 110.00172 * 301.32096 * 8 6 5 36 36 H 1.07998 * 119.93536 * 179.97438 * 9 5 4 37 37 H 1.09007 * 109.46998 * 30.00005 * 14 13 12 38 38 H 1.09001 * 109.47428 * 299.99829 * 15 14 13 39 39 H 1.09005 * 109.47357 * 59.99582 * 15 14 13 40 40 H 1.08997 * 109.47336 * 179.97438 * 15 14 13 41 41 H 0.97000 * 119.99894 * 359.71837 * 18 16 14 42 42 H 1.08998 * 109.46811 * 299.99762 * 21 19 18 43 43 H 1.08994 * 109.47201 * 59.99659 * 21 19 18 44 44 H 1.08994 * 109.47128 * 179.97438 * 22 21 19 45 45 H 1.09008 * 109.46993 * 59.99674 * 22 21 19 46 46 H 0.96702 * 114.00100 * 299.99874 * 25 23 22 47 47 H 1.08998 * 109.47131 * 180.02562 * 26 23 22 48 48 H 1.09002 * 109.46899 * 59.99933 * 26 23 22 49 49 H 1.09002 * 109.47313 * 299.99574 * 27 26 23 50 50 H 1.09006 * 109.47016 * 180.02562 * 27 26 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2932 2.3746 -0.0005 5 6 1.9219 3.6061 -0.0011 6 6 1.1006 4.8696 -0.0011 7 8 0.3639 4.9588 1.2202 8 14 2.2290 6.3439 -0.1548 9 6 3.3021 3.6810 -0.0005 10 6 4.0605 2.5236 0.0058 11 17 5.7938 2.6213 0.0136 12 6 3.4359 1.2861 0.0006 13 8 4.1795 0.1471 0.0016 14 6 4.5347 -0.3970 -1.2711 15 6 3.4537 -1.3797 -1.7254 16 6 5.8536 -1.1174 -1.1591 17 8 6.3881 -1.2391 -0.0772 18 7 6.4418 -1.6216 -2.2620 19 6 7.7268 -2.3167 -2.1538 20 1 8.3307 -1.8457 -1.3782 21 6 7.4845 -3.7833 -1.7912 22 6 8.8265 -4.5095 -1.6789 23 6 9.5629 -4.4301 -3.0177 24 1 10.5192 -4.9471 -2.9375 25 8 8.7709 -5.0475 -4.0343 26 6 9.8053 -2.9636 -3.3803 27 6 8.4633 -2.2375 -3.4926 28 1 -0.3633 0.5139 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 0.2146 2.3191 -0.0005 32 1 0.4080 4.8526 -0.8426 33 1 0.9176 4.9784 2.0129 34 1 1.4311 7.5963 -0.1567 35 1 3.1988 6.3606 0.9695 36 1 3.7895 4.6447 -0.0014 37 1 4.6219 0.4094 -1.9995 38 1 3.3664 -2.1860 -0.9972 39 1 2.4997 -0.8586 -1.8064 40 1 3.7244 -1.7943 -2.6964 41 1 6.0143 -1.5243 -3.1272 42 1 6.9595 -3.8398 -0.8376 43 1 6.8807 -4.2544 -2.5668 44 1 8.6538 -5.5541 -1.4201 45 1 9.4307 -4.0384 -0.9034 46 1 8.5775 -5.9806 -3.8698 47 1 10.3295 -2.9071 -4.3343 48 1 10.4094 -2.4926 -2.6048 49 1 7.8591 -2.7084 -4.2681 50 1 8.6359 -1.1928 -3.7514 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:55 Heat of formation + Delta-G solvation = -169.548325 kcal Electronic energy + Delta-G solvation = -34798.476808 eV Core-core repulsion = 30012.010603 eV Total energy + Delta-G solvation = -4786.466204 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.142 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.01357 -41.23436 -39.94374 -39.26211 -38.96399 -37.83146 -36.99234 -36.62833 -34.55032 -33.05397 -31.83401 -31.51637 -31.36146 -29.54306 -28.53944 -26.72218 -25.53312 -23.83439 -23.66959 -23.31169 -22.64985 -21.51004 -20.86479 -19.74535 -18.77292 -18.64434 -18.36920 -17.75917 -17.59110 -17.23541 -17.04187 -16.60223 -16.33220 -16.31196 -16.03276 -15.98730 -15.76207 -15.63512 -15.48623 -14.85545 -14.66553 -14.41570 -14.28205 -14.06803 -13.97204 -13.69711 -13.53396 -13.33298 -13.24651 -13.21643 -13.03686 -12.93335 -12.71539 -12.65377 -12.46852 -12.41836 -12.14565 -12.04423 -11.88916 -11.80170 -11.61406 -11.36757 -11.24730 -10.87004 -10.71896 -10.59409 -10.12350 -9.88223 -9.42710 -4.95070 -0.35494 -0.03443 0.84428 1.23704 1.48127 1.58358 1.63646 1.92731 2.16315 2.20856 2.68113 3.28358 3.39553 3.46800 3.52495 3.70893 3.72121 3.76721 3.80508 3.84138 3.95731 3.99178 4.00738 4.04098 4.07336 4.22358 4.30572 4.36097 4.38969 4.44530 4.50579 4.50811 4.58676 4.64624 4.69096 4.71144 4.74480 4.83319 4.89488 4.97062 5.04847 5.07274 5.14084 5.14407 5.16276 5.22670 5.26109 5.34539 5.48543 5.91586 6.31804 6.41154 6.48854 6.91073 7.14711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.313 6.313 3 C 0.127 3.873 4 C -0.162 4.162 5 C -0.060 4.060 6 C -0.073 4.073 7 O -0.541 6.541 8 Si 0.753 3.247 9 C -0.136 4.136 10 C -0.023 4.023 11 Cl -0.051 7.051 12 C 0.053 3.947 13 O -0.309 6.309 14 C 0.074 3.926 15 C -0.160 4.160 16 C 0.517 3.483 17 O -0.562 6.562 18 N -0.709 5.709 19 C 0.149 3.851 20 H 0.064 0.936 21 C -0.119 4.119 22 C -0.148 4.148 23 C 0.105 3.895 24 H 0.066 0.934 25 O -0.577 6.577 26 C -0.113 4.113 27 C -0.113 4.113 28 H 0.063 0.937 29 H 0.076 0.924 30 H 0.118 0.882 31 H 0.162 0.838 32 H 0.143 0.857 33 H 0.388 0.612 34 H -0.295 1.295 35 H -0.285 1.285 36 H 0.155 0.845 37 H 0.105 0.895 38 H 0.055 0.945 39 H 0.082 0.918 40 H 0.098 0.902 41 H 0.415 0.585 42 H 0.041 0.959 43 H 0.076 0.924 44 H 0.077 0.923 45 H 0.069 0.931 46 H 0.390 0.610 47 H 0.078 0.922 48 H 0.082 0.918 49 H 0.080 0.920 50 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.844 -0.744 -7.427 7.988 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.226 6.226 3 C 0.080 3.920 4 C -0.181 4.181 5 C -0.061 4.061 6 C -0.182 4.182 7 O -0.349 6.349 8 Si 0.659 3.341 9 C -0.155 4.155 10 C -0.051 4.051 11 Cl -0.022 7.022 12 C 0.008 3.992 13 O -0.225 6.225 14 C 0.015 3.985 15 C -0.217 4.217 16 C 0.303 3.697 17 O -0.440 6.440 18 N -0.363 5.363 19 C 0.045 3.955 20 H 0.082 0.918 21 C -0.157 4.157 22 C -0.186 4.186 23 C 0.047 3.953 24 H 0.084 0.916 25 O -0.385 6.385 26 C -0.151 4.151 27 C -0.151 4.151 28 H 0.082 0.918 29 H 0.095 0.905 30 H 0.136 0.864 31 H 0.180 0.820 32 H 0.161 0.839 33 H 0.237 0.763 34 H -0.222 1.222 35 H -0.212 1.212 36 H 0.172 0.828 37 H 0.122 0.878 38 H 0.075 0.925 39 H 0.101 0.899 40 H 0.116 0.884 41 H 0.252 0.748 42 H 0.060 0.940 43 H 0.095 0.905 44 H 0.096 0.904 45 H 0.087 0.913 46 H 0.240 0.760 47 H 0.097 0.903 48 H 0.100 0.900 49 H 0.099 0.901 50 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -2.347 0.194 -6.797 7.193 hybrid contribution -0.368 -0.695 1.432 1.634 sum -2.715 -0.501 -5.365 6.033 Atomic orbital electron populations 1.23462 0.76003 1.05895 1.02743 1.86217 1.23490 1.25183 1.87720 1.19224 0.90421 0.86189 0.96209 1.21324 1.01709 0.90017 1.05030 1.20124 0.92485 0.96024 0.97482 1.25145 1.02093 1.00429 0.90558 1.86595 1.36882 1.95386 1.16086 0.94084 0.77169 0.74013 0.88839 1.20934 0.93209 0.97245 1.04072 1.21083 0.85880 0.93672 1.04439 1.98413 1.08681 1.98463 1.96612 1.17811 0.87404 0.85394 1.08624 1.86254 1.69921 1.38150 1.28205 1.22332 0.92820 0.97511 0.85806 1.22227 0.98261 0.98874 1.02353 1.20579 0.86155 0.78638 0.84337 1.90725 1.65439 1.58924 1.28877 1.45869 1.22992 1.57416 1.09973 1.20983 0.83712 0.92028 0.98795 0.91759 1.21734 0.98071 0.94931 1.00995 1.22207 0.96494 1.01447 0.98471 1.21781 0.93126 0.94164 0.86262 0.91597 1.86462 1.74170 1.30075 1.47784 1.21556 0.97060 0.93329 1.03186 1.21638 0.96686 1.01370 0.95423 0.91831 0.90529 0.86427 0.82018 0.83929 0.76265 1.22230 1.21177 0.82813 0.87768 0.92550 0.89872 0.88381 0.74765 0.94032 0.90525 0.90416 0.91267 0.76027 0.90290 0.89981 0.90129 0.90678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.65 8.18 -79.63 -0.65 -1.30 16 3 C 0.13 0.37 6.54 22.56 0.15 0.52 16 4 C -0.16 0.21 8.67 22.35 0.19 0.40 16 5 C -0.06 0.11 5.35 -19.86 -0.11 0.01 16 6 C -0.07 0.29 2.80 71.24 0.20 0.49 16 7 O -0.54 0.48 12.83 -148.98 -1.91 -1.43 16 8 Si 0.75 -2.59 29.88 68.60 2.05 -0.54 16 9 C -0.14 -0.05 8.45 22.30 0.19 0.14 16 10 C -0.02 -0.12 6.33 22.39 0.14 0.02 16 11 Cl -0.05 -0.37 28.50 -2.72 -0.08 -0.45 16 12 C 0.05 0.36 5.56 22.58 0.13 0.48 16 13 O -0.31 -3.28 8.48 -67.35 -0.57 -3.85 16 14 C 0.07 0.31 3.19 29.85 0.10 0.40 16 15 C -0.16 0.07 9.05 71.98 0.65 0.72 16 16 C 0.52 4.07 7.14 87.66 0.63 4.69 16 17 O -0.56 -10.09 16.17 15.95 0.26 -9.84 16 18 N -0.71 -0.68 5.04 -442.52 -2.23 -2.91 16 19 C 0.15 0.30 2.46 44.99 0.11 0.41 16 20 H 0.06 0.46 7.58 -2.39 -0.02 0.44 16 21 C -0.12 -0.25 5.35 30.60 0.16 -0.09 16 22 C -0.15 0.13 5.64 30.59 0.17 0.31 16 23 C 0.11 -0.24 3.77 30.60 0.12 -0.12 16 24 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 25 O -0.58 0.89 11.97 -148.98 -1.78 -0.89 16 26 C -0.11 0.23 5.66 30.60 0.17 0.41 16 27 C -0.11 0.21 5.24 30.59 0.16 0.37 16 28 H 0.06 -0.40 7.66 -2.38 -0.02 -0.42 16 29 H 0.08 -0.70 7.66 -2.39 -0.02 -0.71 16 30 H 0.12 -0.97 8.14 -2.39 -0.02 -0.99 16 31 H 0.16 -0.82 6.30 -2.91 -0.02 -0.84 16 32 H 0.14 -1.07 7.96 -2.39 -0.02 -1.09 16 33 H 0.39 -2.09 8.70 -74.06 -0.64 -2.73 16 34 H -0.29 -1.12 7.11 99.48 0.71 -0.41 16 35 H -0.29 -0.42 7.00 99.48 0.70 0.27 16 36 H 0.15 -0.38 4.83 -2.91 -0.01 -0.40 16 37 H 0.10 -0.01 7.91 -2.38 -0.02 -0.03 16 38 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.08 -0.09 6.28 -2.38 -0.01 -0.10 16 40 H 0.10 -0.61 7.94 -2.39 -0.02 -0.63 16 41 H 0.42 -2.28 8.40 -92.71 -0.78 -3.06 16 42 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 43 H 0.08 0.08 7.68 -2.39 -0.02 0.06 16 44 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 45 H 0.07 0.03 8.14 -2.38 -0.02 0.01 16 46 H 0.39 -3.13 9.08 -74.06 -0.67 -3.80 16 47 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 48 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 49 H 0.08 -0.14 7.68 -2.39 -0.02 -0.16 16 50 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 Total: 0.00 -24.59 415.12 -1.71 -26.30 By element: Atomic # 1 Polarization: -14.24 SS G_CDS: -1.06 Total: -15.30 kcal Atomic # 6 Polarization: 5.94 SS G_CDS: 4.27 Total: 10.21 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -2.23 Total: -2.91 kcal Atomic # 8 Polarization: -12.65 SS G_CDS: -4.66 Total: -17.31 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: 2.05 Total: -0.54 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -0.08 Total: -0.45 kcal Total: -24.59 -1.71 -26.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.244 kcal (2) G-P(sol) polarization free energy of solvation -24.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -167.838 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds