Wall clock time and date at job start Tue Mar 9 2021 13:04:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86309 * 109.47118 * 2 1 4 4 C 1.50697 * 109.47055 * 240.00275 * 2 1 3 5 5 C 1.31113 * 118.55023 * 120.00055 * 4 2 1 6 6 N 1.38919 * 121.85391 * 180.42425 * 5 4 2 7 7 C 1.47035 * 118.88219 * 346.68825 * 6 5 4 8 8 C 1.50703 * 109.82312 * 163.20088 * 7 6 5 9 9 O 1.21279 * 120.00024 * 340.86454 * 8 7 6 10 10 N 1.34778 * 119.99935 * 160.86103 * 8 7 6 11 11 C 1.46499 * 119.99771 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47397 * 325.00275 * 11 10 8 13 13 C 1.53002 * 109.46799 * 85.00174 * 11 10 8 14 14 C 1.52997 * 109.46817 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.47452 * 300.00239 * 14 13 11 16 16 H 1.09000 * 109.47360 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.46812 * 300.00186 * 15 14 13 18 18 C 1.52999 * 109.47159 * 59.99536 * 15 14 13 19 19 C 1.52997 * 109.47317 * 300.00546 * 18 15 14 20 20 C 1.53542 * 107.71252 * 43.62688 * 7 6 5 21 21 C 1.50208 * 118.54570 * 300.01825 * 4 2 1 22 22 H 0.96705 * 113.99954 * 60.00048 * 1 2 3 23 23 H 1.09000 * 109.47245 * 120.00027 * 2 1 3 24 24 H 1.48495 * 109.99845 * 59.99912 * 3 2 1 25 25 H 1.48495 * 109.99718 * 181.31723 * 3 2 1 26 26 H 1.08007 * 119.07579 * 0.44868 * 5 4 2 27 27 H 0.97005 * 120.56232 * 166.70336 * 6 5 4 28 28 H 1.09000 * 109.81497 * 284.05783 * 7 6 5 29 29 H 0.97006 * 119.99662 * 0.02562 * 10 8 7 30 30 H 1.08993 * 109.47662 * 299.99952 * 13 11 10 31 31 H 1.09002 * 109.47075 * 60.00457 * 13 11 10 32 32 H 1.09002 * 109.47153 * 60.00231 * 14 13 11 33 33 H 1.09001 * 109.47289 * 180.02562 * 14 13 11 34 34 H 0.96701 * 114.00061 * 180.02562 * 17 15 14 35 35 H 1.08996 * 109.46929 * 179.97438 * 18 15 14 36 36 H 1.09002 * 109.46716 * 60.00455 * 18 15 14 37 37 H 1.09002 * 109.47153 * 299.99641 * 19 18 15 38 38 H 1.09001 * 109.46832 * 179.97438 * 19 18 15 39 39 H 1.08997 * 109.61848 * 58.80583 * 20 7 6 40 40 H 1.08994 * 109.62099 * 179.36344 * 20 7 6 41 41 H 1.08995 * 109.32947 * 280.18685 * 21 4 2 42 42 H 1.08999 * 109.32665 * 39.84154 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.6831 -0.0460 -2.0745 6 7 3.1759 -0.6304 -3.2344 7 6 3.1005 -2.0915 -3.3808 8 6 3.2940 -2.4710 -4.8264 9 8 3.1322 -1.6429 -5.6976 10 7 3.6469 -3.7305 -5.1511 11 6 3.8345 -4.0995 -6.5564 12 1 3.1199 -3.5550 -7.1735 13 6 5.2579 -3.7449 -6.9911 14 6 5.4540 -4.1309 -8.4586 15 6 5.2297 -5.6352 -8.6247 16 1 5.3698 -5.9102 -9.6701 17 8 6.1666 -6.3487 -7.8152 18 6 3.8063 -5.9898 -8.1899 19 6 3.6102 -5.6039 -6.7224 20 6 1.7097 -2.5373 -2.9072 21 6 1.5482 -2.1481 -1.4359 22 1 -0.3933 0.4417 -0.7651 23 1 1.7923 -0.5138 0.8900 24 1 1.5615 2.4679 1.2085 25 1 3.5345 1.7703 -0.0321 26 1 2.9264 0.9847 -1.8620 27 1 3.5636 -0.0839 -3.9359 28 1 3.8686 -2.5643 -2.7687 29 1 3.7760 -4.3929 -4.4542 30 1 5.4179 -2.6734 -6.8724 31 1 5.9726 -4.2896 -6.3740 32 1 4.7394 -3.5866 -9.0760 33 1 6.4682 -3.8787 -8.7682 34 1 6.0827 -7.3105 -7.8714 35 1 3.6464 -7.0614 -8.3087 36 1 3.0917 -5.4455 -8.8073 37 1 4.3249 -6.1481 -6.1050 38 1 2.5960 -5.8560 -6.4129 39 1 0.9437 -2.0404 -3.5025 40 1 1.6159 -3.6180 -3.0133 41 1 2.1883 -2.7831 -0.8235 42 1 0.5090 -2.2905 -1.1395 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_15413834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:12 Heat of formation + Delta-G solvation = -105.882531 kcal Electronic energy + Delta-G solvation = -23065.306095 eV Core-core repulsion = 19625.328812 eV Total energy + Delta-G solvation = -3439.977283 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.162 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.54397 -40.28291 -39.24706 -37.35559 -36.66601 -34.46376 -33.16503 -32.96089 -31.94381 -29.90735 -27.34546 -25.35559 -24.09388 -23.80205 -23.07869 -21.57373 -20.98584 -19.37516 -19.12535 -18.06559 -17.81479 -17.43919 -16.92374 -16.57275 -16.12827 -15.86498 -15.80947 -15.53777 -15.28603 -15.17343 -14.58700 -14.41963 -14.24879 -14.04314 -13.83694 -13.37838 -13.34221 -13.20267 -13.11675 -12.87467 -12.54487 -12.17072 -12.08201 -11.92088 -11.72313 -11.68657 -11.33083 -11.29958 -10.94301 -10.70392 -10.16481 -10.11339 -8.44594 -4.96484 1.34357 1.43986 1.51159 1.67722 1.86876 2.06188 2.61526 3.19932 3.45017 3.56601 3.64025 3.68793 3.74326 3.83460 3.87125 3.98901 4.01568 4.10370 4.24720 4.30032 4.36368 4.39507 4.41509 4.54864 4.57483 4.66446 4.75686 4.76773 4.83426 4.92631 5.01513 5.02760 5.09433 5.16998 5.17764 5.28027 5.31243 5.45159 5.56776 6.22210 6.40735 6.62349 6.76949 6.84371 7.09509 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.042 4.042 3 Si 0.672 3.328 4 C -0.281 4.281 5 C 0.141 3.859 6 N -0.732 5.732 7 C 0.136 3.864 8 C 0.513 3.487 9 O -0.530 6.530 10 N -0.722 5.722 11 C 0.146 3.854 12 H 0.087 0.913 13 C -0.125 4.125 14 C -0.111 4.111 15 C 0.102 3.898 16 H 0.058 0.942 17 O -0.563 6.563 18 C -0.149 4.149 19 C -0.123 4.123 20 C -0.125 4.125 21 C -0.053 4.053 22 H 0.376 0.624 23 H 0.103 0.897 24 H -0.258 1.258 25 H -0.262 1.262 26 H 0.132 0.868 27 H 0.409 0.591 28 H 0.089 0.911 29 H 0.402 0.598 30 H 0.066 0.934 31 H 0.074 0.926 32 H 0.078 0.922 33 H 0.073 0.927 34 H 0.377 0.623 35 H 0.072 0.928 36 H 0.076 0.924 37 H 0.076 0.924 38 H 0.069 0.931 39 H 0.077 0.923 40 H 0.077 0.923 41 H 0.063 0.937 42 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.009 -3.553 -2.593 4.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.155 4.155 3 Si 0.576 3.424 4 C -0.292 4.292 5 C 0.021 3.979 6 N -0.365 5.365 7 C 0.026 3.974 8 C 0.299 3.701 9 O -0.406 6.406 10 N -0.373 5.373 11 C 0.042 3.958 12 H 0.105 0.895 13 C -0.163 4.163 14 C -0.149 4.149 15 C 0.043 3.957 16 H 0.076 0.924 17 O -0.369 6.369 18 C -0.187 4.187 19 C -0.161 4.161 20 C -0.164 4.164 21 C -0.091 4.091 22 H 0.223 0.777 23 H 0.120 0.880 24 H -0.183 1.183 25 H -0.187 1.187 26 H 0.149 0.851 27 H 0.246 0.754 28 H 0.106 0.894 29 H 0.236 0.764 30 H 0.084 0.916 31 H 0.092 0.908 32 H 0.096 0.904 33 H 0.092 0.908 34 H 0.224 0.776 35 H 0.090 0.910 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.087 0.913 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.081 0.919 42 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.647 -2.174 -2.094 3.088 hybrid contribution 0.194 -1.296 0.082 1.313 sum 0.841 -3.471 -2.012 4.099 Atomic orbital electron populations 1.86460 1.17896 1.81637 1.49110 1.24661 0.84730 1.08304 0.97777 0.95084 0.80682 0.79275 0.87408 1.20951 1.08282 0.98695 1.01258 1.20347 0.94041 0.96336 0.87186 1.44261 1.68132 1.04533 1.19552 1.21002 0.99594 0.84013 0.92781 1.20597 0.76132 0.82474 0.90941 1.90729 1.50112 1.49457 1.50297 1.46025 1.70440 1.11654 1.09183 1.21029 0.97645 0.95476 0.81629 0.89453 1.21815 0.96357 1.01643 0.96522 1.21516 1.02952 0.93385 0.97001 1.21822 0.87516 0.92848 0.93525 0.92411 1.86532 1.58231 1.22578 1.69570 1.22203 0.97999 1.02053 0.96494 1.21706 1.02302 0.94566 0.97476 1.21860 0.95016 1.01415 0.98077 1.19930 1.02271 0.92679 0.94182 0.77697 0.88003 1.18295 1.18745 0.85109 0.75394 0.89383 0.76372 0.91574 0.90774 0.90355 0.90798 0.77610 0.90971 0.90569 0.90562 0.91275 0.90425 0.90402 0.91876 0.90095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.58 12.54 -35.23 -0.44 -1.03 16 2 C -0.04 -0.02 2.83 36.00 0.10 0.08 16 3 Si 0.67 -0.19 29.68 -169.99 -5.05 -5.24 16 4 C -0.28 -0.07 5.45 -101.34 -0.55 -0.62 16 5 C 0.14 -0.01 9.63 -16.08 -0.15 -0.16 16 6 N -0.73 -0.21 5.47 -55.34 -0.30 -0.51 16 7 C 0.14 -0.07 3.36 -68.51 -0.23 -0.30 16 8 C 0.51 0.44 7.05 -10.98 -0.08 0.36 16 9 O -0.53 -2.38 15.75 5.56 0.09 -2.29 16 10 N -0.72 0.93 5.08 -53.81 -0.27 0.66 16 11 C 0.15 -0.09 2.45 -67.93 -0.17 -0.26 16 12 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 13 C -0.12 -0.03 5.35 -26.73 -0.14 -0.17 16 14 C -0.11 0.06 5.66 -26.73 -0.15 -0.09 16 15 C 0.10 -0.16 3.77 -26.73 -0.10 -0.26 16 16 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 17 O -0.56 0.45 11.97 -35.23 -0.42 0.03 16 18 C -0.15 0.39 5.64 -26.73 -0.15 0.24 16 19 C -0.12 0.28 5.24 -26.73 -0.14 0.14 16 20 C -0.12 0.12 5.48 -26.43 -0.14 -0.03 16 21 C -0.05 0.01 5.83 -28.10 -0.16 -0.15 16 22 H 0.38 -0.96 8.70 45.56 0.40 -0.57 16 23 H 0.10 0.12 7.96 -51.93 -0.41 -0.29 16 24 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 25 H -0.26 -0.51 7.10 56.52 0.40 -0.11 16 26 H 0.13 -0.20 4.36 -52.48 -0.23 -0.43 16 27 H 0.41 0.18 8.10 -40.82 -0.33 -0.15 16 28 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 29 H 0.40 -1.46 8.60 -40.82 -0.35 -1.81 16 30 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 31 H 0.07 0.08 7.68 -51.93 -0.40 -0.32 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.38 -1.64 9.08 45.56 0.41 -1.23 16 35 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 36 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 37 H 0.08 -0.17 7.68 -51.93 -0.40 -0.57 16 38 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.08 0.03 7.82 -51.93 -0.41 -0.37 16 LS Contribution 329.57 15.07 4.97 4.97 Total: 0.00 -7.43 329.57 -9.46 -16.89 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -5.96 Total: -12.25 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -2.07 Total: -1.23 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.58 Total: 0.14 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -0.78 Total: -3.28 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.05 Total: -5.24 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -7.43 -9.46 -16.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_15413834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.990 kcal (2) G-P(sol) polarization free energy of solvation -7.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.465 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.892 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds