Wall clock time and date at job start Tue Mar 9 2021 13:04:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.38271 * 119.94391 * 119.72423 * 4 2 1 6 6 C 1.38148 * 120.05274 * 179.72564 * 5 4 2 7 7 C 1.38730 * 119.94378 * 0.57432 * 6 5 4 8 8 O 1.35900 * 120.05580 * 179.67764 * 7 6 5 9 9 C 1.42902 * 117.00003 * 0.02570 * 8 7 6 10 10 C 1.50696 * 109.47499 * 179.97438 * 9 8 7 11 11 C 1.36417 * 125.80333 * 89.70842 * 10 9 8 12 12 C 1.47379 * 127.18934 * 0.02562 * 11 10 9 13 13 O 1.21616 * 120.00285 * 359.97438 * 12 11 10 14 14 N 1.34780 * 120.00039 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00340 * 179.97438 * 14 12 11 16 16 H 1.08998 * 109.46806 * 34.99704 * 15 14 12 17 17 C 1.52999 * 109.47323 * 155.00290 * 15 14 12 18 18 C 1.52995 * 109.47143 * 59.99471 * 17 15 14 19 19 C 1.52998 * 109.47156 * 60.00453 * 18 17 15 20 20 H 1.09003 * 109.47000 * 59.99689 * 19 18 17 21 21 O 1.42901 * 109.47444 * 179.97438 * 19 18 17 22 22 C 1.53004 * 109.47224 * 299.99848 * 19 18 17 23 23 C 1.52998 * 109.46664 * 275.00082 * 15 14 12 24 24 C 1.47016 * 105.61620 * 179.87256 * 11 10 9 25 25 C 1.34182 * 105.95468 * 0.39325 * 24 11 10 26 26 O 1.33651 * 125.79922 * 270.02832 * 10 9 8 27 27 C 1.38736 * 119.88967 * 359.70253 * 7 6 5 28 28 C 1.38141 * 119.94155 * 359.97438 * 27 7 6 29 29 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 30 30 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 31 31 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 32 32 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 33 33 H 1.07996 * 119.97091 * 359.97438 * 5 4 2 34 34 H 1.07997 * 120.02526 * 180.29633 * 6 5 4 35 35 H 1.08999 * 109.46924 * 299.99564 * 9 8 7 36 36 H 1.08995 * 109.47129 * 59.99295 * 9 8 7 37 37 H 0.97009 * 119.99907 * 0.02562 * 14 12 11 38 38 H 1.08996 * 109.46910 * 180.02562 * 17 15 14 39 39 H 1.09002 * 109.46776 * 299.99772 * 17 15 14 40 40 H 1.09007 * 109.47082 * 179.97438 * 18 17 15 41 41 H 1.08996 * 109.47651 * 300.00077 * 18 17 15 42 42 H 0.96703 * 113.99941 * 180.02562 * 21 19 18 43 43 H 1.09002 * 109.47276 * 179.97438 * 22 19 18 44 44 H 1.08996 * 109.46624 * 299.99789 * 22 19 18 45 45 H 1.09003 * 109.47837 * 60.00162 * 23 15 14 46 46 H 1.09003 * 109.46722 * 179.97438 * 23 15 14 47 47 H 1.08008 * 127.02565 * 180.18812 * 24 11 10 48 48 H 1.07994 * 125.43748 * 179.72012 * 25 24 11 49 49 H 1.07995 * 120.02461 * 179.97438 * 27 7 6 50 50 H 1.07999 * 119.96989 * 180.02562 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1881 -0.6863 -3.2684 7 6 2.8533 -2.0144 -3.4893 8 8 3.3056 -2.6548 -4.5994 9 6 4.1221 -1.8996 -5.4966 10 6 4.5267 -2.7682 -6.6597 11 6 3.8348 -2.9128 -7.8264 12 6 2.5650 -2.2621 -8.1956 13 8 2.0229 -1.5011 -7.4172 14 7 2.0045 -2.5105 -9.3959 15 6 0.7420 -1.8641 -9.7627 16 1 0.7131 -0.8588 -9.3425 17 6 0.6343 -1.7834 -11.2867 18 6 0.6750 -3.1946 -11.8763 19 6 -0.4952 -4.0116 -11.3250 20 1 -1.4345 -3.5307 -11.5979 21 8 -0.4575 -5.3296 -11.8761 22 6 -0.3875 -4.0924 -9.8009 23 6 -0.4281 -2.6812 -9.2113 24 6 4.6224 -3.8504 -8.6401 25 6 5.6882 -4.1804 -7.8946 26 8 5.6214 -3.5325 -6.7210 27 6 2.0556 -2.6875 -2.5754 28 6 1.5971 -2.0343 -1.4478 29 1 -0.3934 0.4417 0.7649 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4679 -1.2085 32 1 1.5878 2.4586 1.2242 33 1 2.9776 0.9997 -1.9728 34 1 3.8092 -0.1603 -3.9782 35 1 3.5607 -1.0400 -5.8627 36 1 5.0140 -1.5549 -4.9734 37 1 2.4368 -3.1178 -10.0167 38 1 -0.3048 -1.3021 -11.5595 39 1 1.4680 -1.2013 -11.6795 40 1 0.5978 -3.1371 -12.9622 41 1 1.6143 -3.6755 -11.6035 42 1 -1.1723 -5.9045 -11.5700 43 1 -1.2215 -4.6741 -9.4081 44 1 0.5518 -4.5733 -9.5281 45 1 -0.3515 -2.7388 -8.1255 46 1 -1.3675 -2.2001 -9.4838 47 1 4.3890 -4.2041 -9.6335 48 1 6.4738 -4.8594 -8.1912 49 1 1.7932 -3.7212 -2.7454 50 1 0.9764 -2.5580 -0.7358 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:51 Heat of formation + Delta-G solvation = -107.279666 kcal Electronic energy + Delta-G solvation = -34262.476432 eV Core-core repulsion = 29609.369389 eV Total energy + Delta-G solvation = -4653.107043 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -43.71353 -41.21109 -41.10804 -39.40954 -39.01044 -37.28560 -36.98290 -34.44511 -33.61623 -32.79402 -31.98241 -31.86800 -31.38527 -29.92984 -27.79194 -26.05460 -24.83522 -23.87128 -23.69882 -23.26837 -22.39901 -22.04590 -21.02796 -20.21249 -19.34073 -19.23704 -18.46702 -18.28531 -17.61853 -17.22773 -17.01668 -16.81456 -16.72644 -16.65300 -16.39718 -15.91174 -15.63666 -15.61039 -15.41851 -15.19499 -14.67452 -14.61986 -14.36817 -14.19533 -14.15911 -14.03207 -13.96900 -13.86751 -13.71985 -13.37386 -13.28175 -13.06014 -12.91900 -12.39508 -12.30569 -12.26391 -12.03267 -11.82947 -11.80547 -11.62558 -11.30577 -10.94851 -10.93573 -10.82445 -10.43129 -10.09048 -9.89548 -9.83080 -9.05781 -4.92903 0.06943 0.42630 0.45342 0.95357 1.33821 1.52288 1.63281 2.00572 2.14924 2.22270 2.57433 2.75024 3.09463 3.32167 3.42285 3.53856 3.60867 3.65414 3.69500 3.82032 3.90176 3.94910 3.96675 3.98256 4.04018 4.10666 4.19590 4.26025 4.31184 4.34889 4.37448 4.41810 4.46934 4.49998 4.57382 4.60485 4.73450 4.76787 4.78530 4.91703 4.97680 4.99035 5.04852 5.07475 5.12785 5.17008 5.25182 5.29280 5.39618 5.49455 5.63538 5.81106 5.87498 6.40947 6.48441 6.50399 6.63123 7.22170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.070 4.070 3 Si 0.678 3.322 4 C -0.112 4.112 5 C -0.072 4.072 6 C -0.201 4.201 7 C 0.142 3.858 8 O -0.304 6.304 9 C 0.136 3.864 10 C 0.064 3.936 11 C -0.210 4.210 12 C 0.589 3.411 13 O -0.533 6.533 14 N -0.715 5.715 15 C 0.145 3.855 16 H 0.094 0.906 17 C -0.126 4.126 18 C -0.114 4.114 19 C 0.103 3.897 20 H 0.057 0.943 21 O -0.569 6.569 22 C -0.151 4.151 23 C -0.130 4.130 24 C -0.196 4.196 25 C -0.015 4.015 26 O -0.165 6.165 27 C -0.149 4.149 28 C -0.051 4.051 29 H 0.379 0.621 30 H 0.075 0.925 31 H -0.255 1.255 32 H -0.262 1.262 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.116 0.884 36 H 0.084 0.916 37 H 0.400 0.600 38 H 0.084 0.916 39 H 0.078 0.922 40 H 0.076 0.924 41 H 0.067 0.933 42 H 0.380 0.620 43 H 0.066 0.934 44 H 0.070 0.930 45 H 0.074 0.926 46 H 0.075 0.925 47 H 0.161 0.839 48 H 0.214 0.786 49 H 0.133 0.867 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.862 -0.571 -1.614 3.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.580 3.420 4 C -0.113 4.113 5 C -0.090 4.090 6 C -0.220 4.220 7 C 0.097 3.903 8 O -0.217 6.217 9 C 0.061 3.939 10 C 0.011 3.989 11 C -0.215 4.215 12 C 0.377 3.623 13 O -0.411 6.411 14 N -0.367 5.367 15 C 0.041 3.959 16 H 0.112 0.888 17 C -0.164 4.164 18 C -0.152 4.152 19 C 0.045 3.955 20 H 0.075 0.925 21 O -0.375 6.375 22 C -0.189 4.189 23 C -0.169 4.169 24 C -0.216 4.216 25 C -0.081 4.081 26 O -0.060 6.060 27 C -0.167 4.167 28 C -0.069 4.069 29 H 0.226 0.774 30 H 0.093 0.907 31 H -0.180 1.180 32 H -0.187 1.187 33 H 0.147 0.853 34 H 0.151 0.849 35 H 0.133 0.867 36 H 0.102 0.898 37 H 0.236 0.764 38 H 0.103 0.897 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.085 0.915 42 H 0.227 0.773 43 H 0.085 0.915 44 H 0.089 0.911 45 H 0.092 0.908 46 H 0.094 0.906 47 H 0.178 0.822 48 H 0.231 0.769 49 H 0.151 0.849 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.056 0.537 -1.769 3.572 hybrid contribution -1.372 -0.721 0.179 1.560 sum 1.685 -0.184 -1.591 2.324 Atomic orbital electron populations 1.86598 1.17981 1.80072 1.49704 1.24717 0.84297 1.10702 0.98253 0.95186 0.91751 0.74862 0.80242 1.19137 1.00957 0.94618 0.96547 1.20707 0.96442 0.98949 0.92875 1.21146 1.06180 0.94157 1.00496 1.18937 0.94076 0.91096 0.86187 1.86084 1.64738 1.39676 1.31247 1.21103 0.95177 0.91489 0.86119 1.21953 0.86256 0.94928 0.95743 1.21237 0.98589 1.05131 0.96522 1.17189 0.82921 0.80592 0.81604 1.90803 1.63484 1.36641 1.50178 1.45897 1.24612 1.48612 1.17628 1.21003 0.82769 0.97461 0.94709 0.88753 1.21823 1.03952 0.96886 0.93706 1.21476 0.98048 0.94390 1.01270 1.21836 0.98370 0.83557 0.91784 0.92506 1.86503 1.55316 1.23880 1.71805 1.22242 1.03033 0.97745 0.95831 1.21891 0.98256 0.95195 1.01509 1.22895 0.95859 1.01131 1.01683 1.24054 1.01448 0.99169 0.83443 1.83797 1.39198 1.46620 1.36387 1.20460 1.00764 1.01138 0.94364 1.20784 0.96536 0.93573 0.95977 0.77377 0.90684 1.17968 1.18725 0.85292 0.84940 0.86682 0.89794 0.76368 0.89724 0.90286 0.90543 0.91472 0.77281 0.91540 0.91093 0.90752 0.90615 0.82189 0.76926 0.84914 0.85024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.13 12.74 -35.23 -0.45 -1.58 16 2 C -0.07 -0.06 2.81 36.00 0.10 0.04 16 3 Si 0.68 -0.05 29.78 -169.99 -5.06 -5.11 16 4 C -0.11 -0.28 5.42 -104.60 -0.57 -0.85 16 5 C -0.07 -0.14 8.66 -39.60 -0.34 -0.48 16 6 C -0.20 -0.45 9.04 -39.43 -0.36 -0.80 16 7 C 0.14 0.52 6.69 -39.22 -0.26 0.26 16 8 O -0.30 -1.27 10.12 -19.43 -0.20 -1.46 16 9 C 0.14 0.28 4.73 36.00 0.17 0.45 16 10 C 0.06 0.16 7.00 -34.97 -0.24 -0.09 16 11 C -0.21 -0.43 6.31 -103.28 -0.65 -1.08 16 12 C 0.59 1.72 7.78 -12.54 -0.10 1.62 16 13 O -0.53 -3.11 14.51 5.26 0.08 -3.03 16 14 N -0.71 -0.09 4.23 -54.90 -0.23 -0.32 16 15 C 0.14 -0.04 2.78 -67.93 -0.19 -0.23 16 16 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 17 C -0.13 0.26 5.61 -26.73 -0.15 0.11 16 18 C -0.11 0.16 5.40 -26.74 -0.14 0.02 16 19 C 0.10 -0.08 3.47 -26.73 -0.09 -0.18 16 20 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 21 O -0.57 -0.23 13.32 -35.23 -0.47 -0.70 16 22 C -0.15 0.09 5.39 -26.73 -0.14 -0.06 16 23 C -0.13 0.00 5.60 -26.73 -0.15 -0.15 16 24 C -0.20 0.13 10.60 -37.45 -0.40 -0.27 16 25 C -0.01 0.02 12.03 29.30 0.35 0.37 16 26 O -0.16 -0.26 10.52 7.65 0.08 -0.18 16 27 C -0.15 -0.48 9.99 -39.43 -0.39 -0.88 16 28 C -0.05 -0.14 9.60 -39.61 -0.38 -0.52 16 29 H 0.38 -0.75 8.74 45.56 0.40 -0.35 16 30 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 31 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 32 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 33 H 0.13 -0.03 4.87 -52.49 -0.26 -0.28 16 34 H 0.13 0.01 6.30 -52.49 -0.33 -0.32 16 35 H 0.12 0.27 6.02 -51.93 -0.31 -0.04 16 36 H 0.08 -0.03 7.66 -51.93 -0.40 -0.43 16 37 H 0.40 -0.64 6.04 -40.82 -0.25 -0.89 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 40 H 0.08 -0.08 8.14 -51.92 -0.42 -0.51 16 41 H 0.07 -0.10 6.50 -51.93 -0.34 -0.44 16 42 H 0.38 -1.16 9.08 45.56 0.41 -0.75 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 0.03 7.60 -51.93 -0.39 -0.36 16 45 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 47 H 0.16 -0.53 7.74 -52.48 -0.41 -0.93 16 48 H 0.21 -1.06 8.06 -52.49 -0.42 -1.48 16 49 H 0.13 0.29 8.06 -52.49 -0.42 -0.13 16 50 H 0.13 0.19 8.06 -52.49 -0.42 -0.23 16 LS Contribution 405.64 15.07 6.11 6.11 Total: 0.00 -10.20 405.64 -10.18 -20.39 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -6.10 Total: -11.40 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -3.94 Total: -2.71 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.23 Total: -0.32 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -0.96 Total: -6.95 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.06 Total: -5.11 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -10.20 -10.18 -20.39 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.894 kcal (2) G-P(sol) polarization free energy of solvation -10.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.386 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds