Wall clock time and date at job start Tue Mar 9 2021 13:05:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35983 * 116.99616 * 2 1 4 4 C 1.38680 * 119.99760 * 179.97438 * 3 2 1 5 5 C 1.38151 * 119.99629 * 180.02562 * 4 3 2 6 6 C 1.50704 * 119.99412 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.47043 * 104.98096 * 6 5 4 8 8 Si 1.86303 * 109.47366 * 344.97731 * 6 5 4 9 9 C 1.38672 * 120.00265 * 0.02562 * 5 4 3 10 10 O 1.35982 * 119.99877 * 180.02562 * 9 5 4 11 11 C 1.42907 * 116.99856 * 179.97438 * 10 9 5 12 12 C 1.50696 * 109.47004 * 180.02562 * 11 10 9 13 13 O 1.21288 * 120.00036 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00081 * 180.02562 * 12 11 10 15 15 C 1.46506 * 119.99949 * 180.02562 * 14 12 11 16 16 H 1.09000 * 109.47020 * 324.99485 * 15 14 12 17 17 C 1.52999 * 109.47075 * 84.99839 * 15 14 12 18 18 C 1.52997 * 109.47317 * 59.99940 * 17 15 14 19 19 C 1.53000 * 109.47060 * 59.99960 * 18 17 15 20 20 H 1.08992 * 109.47399 * 59.99823 * 19 18 17 21 21 O 1.42903 * 109.46726 * 180.02562 * 19 18 17 22 22 C 1.53002 * 109.47233 * 299.99657 * 19 18 17 23 23 C 1.52997 * 109.46817 * 60.00194 * 22 19 18 24 24 C 1.38715 * 120.00015 * 0.27318 * 9 5 4 25 25 C 1.38109 * 119.99859 * 359.44673 * 24 9 5 26 26 H 1.08987 * 109.47425 * 299.99773 * 1 2 3 27 27 H 1.08999 * 109.46823 * 60.00837 * 1 2 3 28 28 H 1.09005 * 109.46915 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.99567 * 0.04304 * 4 3 2 30 30 H 1.08999 * 109.46719 * 224.97694 * 6 5 4 31 31 H 0.96702 * 113.99883 * 59.99511 * 7 6 5 32 32 H 1.48497 * 109.99821 * 178.68090 * 8 6 5 33 33 H 1.48497 * 109.99981 * 300.00212 * 8 6 5 34 34 H 1.08990 * 109.47115 * 60.00084 * 11 10 9 35 35 H 1.08997 * 109.46682 * 299.99958 * 11 10 9 36 36 H 0.97000 * 120.00195 * 359.97438 * 14 12 11 37 37 H 1.08996 * 109.46929 * 299.99044 * 17 15 14 38 38 H 1.09002 * 109.46716 * 179.97438 * 17 15 14 39 39 H 1.09002 * 109.47153 * 299.99641 * 18 17 15 40 40 H 1.09001 * 109.46832 * 179.97438 * 18 17 15 41 41 H 0.96700 * 113.99509 * 179.97438 * 21 19 18 42 42 H 1.08993 * 109.47662 * 180.02562 * 22 19 18 43 43 H 1.09002 * 109.47075 * 300.00932 * 22 19 18 44 44 H 1.09002 * 109.47153 * 60.00231 * 23 22 19 45 45 H 1.09001 * 109.47289 * 180.02562 * 23 22 19 46 46 H 1.08001 * 120.00295 * 179.71092 * 24 9 5 47 47 H 1.08006 * 120.00033 * 180.25411 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0583 2.5153 0.0011 6 6 5.5633 2.5941 0.0011 7 8 6.0207 2.9674 -1.3002 8 14 6.2723 0.9323 0.4556 9 6 3.3030 3.6782 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0803 6.0460 0.0016 12 6 3.9344 7.2875 0.0010 13 8 5.1435 7.1917 0.0010 14 7 3.3548 8.5042 0.0014 15 6 4.1852 9.7112 0.0002 16 1 5.0853 9.5335 0.5887 17 6 4.5763 10.0598 -1.4373 18 6 3.3128 10.3092 -2.2634 19 6 2.5255 11.4705 -1.6531 20 1 3.1433 12.3685 -1.6540 21 8 1.3452 11.7030 -2.4244 22 6 2.1344 11.1219 -0.2156 23 6 3.3978 10.8725 0.6104 24 6 1.9178 3.6056 0.0073 25 6 1.2908 2.3750 0.0010 26 1 -0.3633 0.5137 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 4.0194 0.3785 0.0003 30 1 5.8880 3.3388 0.7278 31 1 5.6900 3.8244 -1.6025 32 1 7.7560 0.9884 0.4281 33 1 5.8041 0.5328 1.8070 34 1 2.4511 6.0379 0.8915 35 1 2.4511 6.0378 -0.8884 36 1 2.3878 8.5808 0.0017 37 1 5.1373 9.2325 -1.8720 38 1 5.1937 10.9580 -1.4382 39 1 2.6950 9.4112 -2.2626 40 1 3.5915 10.5580 -3.2874 41 1 0.7960 12.4272 -2.0942 42 1 1.5731 11.9490 0.2190 43 1 1.5166 10.2238 -0.2148 44 1 4.0156 11.7705 0.6096 45 1 3.1192 10.6237 1.6344 46 1 1.3295 4.5113 0.0125 47 1 0.2122 2.3184 0.0013 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:16 Heat of formation + Delta-G solvation = -164.152338 kcal Electronic energy + Delta-G solvation = -29932.896439 eV Core-core repulsion = 25662.001634 eV Total energy + Delta-G solvation = -4270.894805 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.88153 -41.33504 -40.19387 -39.38965 -38.00458 -37.06621 -36.79254 -34.22855 -32.77487 -32.08672 -31.26860 -30.33807 -28.85116 -28.03478 -26.48351 -24.13078 -23.89596 -23.25487 -22.39912 -22.08482 -20.39286 -19.50955 -18.82441 -18.67648 -18.35975 -17.91105 -17.56309 -17.43476 -16.95571 -16.70253 -16.51062 -16.05696 -15.89091 -15.66473 -15.38412 -15.29274 -15.12706 -14.80248 -14.44734 -14.26916 -14.11541 -13.97621 -13.90836 -13.62275 -13.50041 -13.44491 -13.07751 -13.05029 -12.65883 -12.48318 -12.26468 -12.24618 -11.86254 -11.84944 -11.51343 -11.43317 -11.14689 -11.00645 -10.95496 -10.89139 -10.22216 -10.06330 -8.81268 -4.73560 0.08380 0.35746 1.38004 1.43515 1.54564 1.79677 2.15128 2.26434 2.50001 2.57155 3.03242 3.34780 3.45844 3.49586 3.55737 3.65600 3.74697 3.79570 3.82574 3.93784 3.96779 3.97233 4.08904 4.12298 4.13436 4.18195 4.18885 4.23823 4.29438 4.34650 4.41236 4.44276 4.54121 4.65111 4.65707 4.79541 4.84200 4.85900 5.02310 5.03675 5.10743 5.11978 5.12542 5.19380 5.32837 5.41435 6.07136 6.27836 6.39206 6.56067 6.75289 7.03412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.099 4.099 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.100 3.900 10 O -0.290 6.290 11 C 0.040 3.960 12 C 0.517 3.483 13 O -0.511 6.511 14 N -0.721 5.721 15 C 0.146 3.854 16 H 0.095 0.905 17 C -0.130 4.130 18 C -0.112 4.112 19 C 0.103 3.897 20 H 0.058 0.942 21 O -0.568 6.568 22 C -0.154 4.154 23 C -0.126 4.126 24 C -0.165 4.165 25 C -0.165 4.165 26 H 0.055 0.945 27 H 0.056 0.944 28 H 0.103 0.897 29 H 0.146 0.854 30 H 0.078 0.922 31 H 0.368 0.632 32 H -0.254 1.254 33 H -0.251 1.251 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.401 0.599 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.068 0.932 40 H 0.072 0.928 41 H 0.379 0.621 42 H 0.071 0.929 43 H 0.068 0.932 44 H 0.084 0.916 45 H 0.075 0.925 46 H 0.133 0.867 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.316 3.117 1.111 8.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.100 4.100 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.039 4.039 12 C 0.301 3.699 13 O -0.385 6.385 14 N -0.376 5.376 15 C 0.042 3.958 16 H 0.113 0.887 17 C -0.169 4.169 18 C -0.149 4.149 19 C 0.044 3.956 20 H 0.076 0.924 21 O -0.374 6.374 22 C -0.192 4.192 23 C -0.164 4.164 24 C -0.184 4.184 25 C -0.184 4.184 26 H 0.074 0.926 27 H 0.075 0.925 28 H 0.121 0.879 29 H 0.164 0.836 30 H 0.096 0.904 31 H 0.216 0.784 32 H -0.179 1.179 33 H -0.175 1.175 34 H 0.110 0.890 35 H 0.112 0.888 36 H 0.236 0.764 37 H 0.096 0.904 38 H 0.096 0.904 39 H 0.087 0.913 40 H 0.091 0.909 41 H 0.226 0.774 42 H 0.090 0.910 43 H 0.087 0.913 44 H 0.103 0.897 45 H 0.094 0.906 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.079 1.384 1.375 5.441 hybrid contribution -1.831 2.584 0.717 3.247 sum -6.910 3.968 2.092 8.238 Atomic orbital electron populations 1.23100 0.78073 1.04388 1.01321 1.86116 1.21535 1.26165 1.88885 1.18810 0.91911 0.84572 0.98889 1.20058 0.91635 0.96767 1.03626 1.19482 0.96617 0.90027 1.03838 1.25371 0.91482 1.12356 0.88820 1.86706 1.73776 1.41925 1.31460 0.93016 0.79752 0.80271 0.82792 1.18658 0.90823 0.84604 1.00469 1.86113 1.33866 1.11059 1.89258 1.22458 0.93222 0.84204 1.03967 1.20012 0.88838 0.84198 0.76842 1.90789 1.14052 1.86531 1.47112 1.45955 1.10544 1.04994 1.76121 1.21021 0.94526 0.83303 0.96963 0.88714 1.21923 0.97348 1.02830 0.94777 1.21446 0.95947 0.97726 0.99798 1.21852 0.86471 0.97914 0.89369 0.92424 1.86538 1.36815 1.57875 1.56149 1.22296 0.98082 1.02593 0.96199 1.21805 0.96815 0.98274 0.99511 1.21019 0.92839 0.98693 1.05848 1.21083 1.00328 0.91508 1.05459 0.92628 0.92536 0.87872 0.83638 0.90427 0.78376 1.17899 1.17530 0.88960 0.88805 0.76384 0.90392 0.90371 0.91297 0.90935 0.77359 0.90984 0.91331 0.89713 0.90607 0.84940 0.84702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.44 10.50 -19.69 -0.21 -0.65 16 3 C 0.10 0.18 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.21 8.59 -39.45 -0.34 -0.55 16 5 C -0.10 -0.27 5.27 -104.49 -0.55 -0.82 16 6 C -0.07 -0.23 2.33 36.01 0.08 -0.15 16 7 O -0.53 -2.18 12.65 -35.23 -0.45 -2.63 16 8 Si 0.74 1.44 30.17 -169.99 -5.13 -3.69 16 9 C 0.10 0.20 6.62 -39.24 -0.26 -0.06 16 10 O -0.29 -0.66 8.56 -39.59 -0.34 -0.99 16 11 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 12 C 0.52 0.41 7.87 -10.99 -0.09 0.33 16 13 O -0.51 -2.78 16.16 -14.36 -0.23 -3.01 16 14 N -0.72 1.45 4.23 -53.80 -0.23 1.22 16 15 C 0.15 -0.23 2.78 -67.93 -0.19 -0.42 16 16 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 17 C -0.13 0.15 5.60 -26.73 -0.15 0.00 16 18 C -0.11 0.11 5.42 -26.73 -0.14 -0.03 16 19 C 0.10 -0.20 3.47 -26.73 -0.09 -0.29 16 20 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 21 O -0.57 0.33 13.32 -35.23 -0.47 -0.14 16 22 C -0.15 0.56 5.37 -26.73 -0.14 0.41 16 23 C -0.13 0.44 5.61 -26.73 -0.15 0.29 16 24 C -0.17 -0.01 9.03 -39.45 -0.36 -0.36 16 25 C -0.16 -0.03 9.03 -39.45 -0.36 -0.39 16 26 H 0.06 -0.16 7.66 -51.94 -0.40 -0.56 16 27 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 28 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 29 H 0.15 0.06 5.13 -52.48 -0.27 -0.21 16 30 H 0.08 0.31 7.82 -51.93 -0.41 -0.09 16 31 H 0.37 1.01 8.60 45.56 0.39 1.40 16 32 H -0.25 -1.18 7.11 56.52 0.40 -0.78 16 33 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 34 H 0.09 -0.32 7.65 -51.93 -0.40 -0.72 16 35 H 0.09 -0.33 7.67 -51.93 -0.40 -0.73 16 36 H 0.40 -1.75 6.87 -40.82 -0.28 -2.03 16 37 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.07 -0.04 7.60 -51.93 -0.39 -0.44 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.38 -1.66 9.08 45.56 0.41 -1.25 16 42 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.07 -0.26 6.50 -51.93 -0.34 -0.60 16 44 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 45 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 46 H 0.13 -0.37 6.29 -52.49 -0.33 -0.70 16 47 H 0.14 -0.29 6.29 -52.48 -0.33 -0.62 16 LS Contribution 376.07 15.07 5.67 5.67 Total: 0.00 -9.46 376.07 -9.31 -18.77 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -6.11 Total: -13.49 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -1.82 Total: -1.06 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.23 Total: 1.22 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -1.69 Total: -7.42 kcal Atomic # 14 Polarization: 1.44 SS G_CDS: -5.13 Total: -3.69 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.46 -9.31 -18.77 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.387 kcal (2) G-P(sol) polarization free energy of solvation -9.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds