Wall clock time and date at job start Tue Mar 9 2021 13:05:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86304 * 109.46699 * 2 1 4 4 C 1.50695 * 109.47185 * 240.00502 * 2 1 3 5 5 C 1.35454 * 125.56861 * 120.02426 * 4 2 1 6 6 C 1.39831 * 107.86710 * 179.97438 * 5 4 2 7 7 C 1.37874 * 107.08488 * 0.02562 * 6 5 4 8 8 C 1.46681 * 126.23268 * 179.97438 * 7 6 5 9 9 O 1.21697 * 119.99705 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00136 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00083 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47085 * 324.99913 * 11 10 8 13 13 C 1.53000 * 109.47023 * 85.00169 * 11 10 8 14 14 C 1.53002 * 109.47233 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.46817 * 299.99806 * 14 13 11 16 16 H 1.09001 * 109.47289 * 179.97438 * 15 14 13 17 17 O 1.42905 * 109.47264 * 299.99852 * 15 14 13 18 18 C 1.53005 * 109.47452 * 59.99761 * 15 14 13 19 19 C 1.53001 * 109.46826 * 204.99637 * 11 10 8 20 20 N 1.35533 * 125.56436 * 300.24569 * 4 2 1 21 21 H 0.96696 * 113.99609 * 59.99941 * 1 2 3 22 22 H 1.08995 * 109.47085 * 119.99665 * 2 1 3 23 23 H 1.48501 * 110.00209 * 60.00311 * 3 2 1 24 24 H 1.48503 * 109.99750 * 181.31649 * 3 2 1 25 25 H 1.07998 * 126.06395 * 359.93680 * 5 4 2 26 26 H 1.07997 * 126.46085 * 180.02562 * 6 5 4 27 27 H 0.97004 * 119.99693 * 359.97438 * 10 8 7 28 28 H 1.09000 * 109.46968 * 299.99910 * 13 11 10 29 29 H 1.09002 * 109.47398 * 59.99929 * 13 11 10 30 30 H 1.08992 * 109.46974 * 179.97438 * 14 13 11 31 31 H 1.09002 * 109.47070 * 59.99626 * 14 13 11 32 32 H 0.96702 * 113.99404 * 300.00214 * 17 15 14 33 33 H 1.09002 * 109.46935 * 59.99874 * 18 15 14 34 34 H 1.08992 * 109.47061 * 179.97438 * 18 15 14 35 35 H 1.09004 * 109.47086 * 60.00300 * 19 11 10 36 36 H 1.08992 * 109.47514 * 300.00013 * 19 11 10 37 37 H 0.97008 * 125.67576 * 0.07056 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7138 -0.1636 -2.1916 6 6 2.9578 -1.1459 -3.1564 7 6 2.3023 -2.2876 -2.7468 8 6 2.2785 -3.5737 -3.4516 9 8 2.8777 -3.7026 -4.5029 10 7 1.5930 -4.6128 -2.9348 11 6 1.5688 -5.8972 -3.6390 12 1 1.5681 -5.7218 -4.7148 13 6 2.8057 -6.7122 -3.2559 14 6 2.7808 -8.0534 -3.9919 15 6 1.5196 -8.8262 -3.6009 16 1 1.5015 -9.7815 -4.1254 17 8 1.5202 -9.0567 -2.1905 18 6 0.2826 -8.0112 -3.9839 19 6 0.3076 -6.6698 -3.2474 20 7 1.6706 -1.9992 -1.5583 21 1 -0.3932 0.4417 -0.7650 22 1 1.7924 -0.5138 0.8900 23 1 1.5615 2.4680 1.2085 24 1 3.5346 1.7704 -0.0321 25 1 3.0831 0.8511 -2.2098 26 1 3.5484 -1.0318 -4.0533 27 1 1.1157 -4.5101 -2.0966 28 1 3.7042 -6.1618 -3.5349 29 1 2.8064 -6.8876 -2.1801 30 1 3.6621 -8.6338 -3.7193 31 1 2.7803 -7.8776 -5.0676 32 1 2.2777 -9.5689 -1.8761 33 1 0.2821 -7.8354 -5.0596 34 1 -0.6158 -8.5620 -3.7057 35 1 -0.5736 -6.0891 -3.5203 36 1 0.3083 -6.8452 -2.1717 37 1 1.1296 -2.6162 -1.0410 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:37 Heat of formation + Delta-G solvation = -84.723417 kcal Electronic energy + Delta-G solvation = -20532.744042 eV Core-core repulsion = 17276.533384 eV Total energy + Delta-G solvation = -3256.210657 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.55726 -40.93549 -39.54889 -37.68527 -36.74638 -34.46043 -32.22781 -31.88331 -31.49612 -29.72601 -26.79031 -24.07218 -23.81553 -22.55895 -21.48589 -21.37729 -20.86103 -19.77093 -18.14231 -17.80555 -17.39415 -16.83499 -16.54486 -16.24703 -15.95638 -15.57984 -15.22411 -15.15535 -14.60608 -14.48995 -14.33057 -14.13610 -13.99609 -13.66536 -13.55286 -13.26540 -13.10482 -12.51509 -12.20613 -12.09766 -12.06137 -11.68143 -11.41566 -11.27738 -10.74704 -10.67220 -10.27215 -10.09528 -9.29322 -4.90764 0.27484 1.22721 1.52621 1.72717 1.89256 1.97863 2.20081 2.24684 3.35971 3.45845 3.55725 3.60494 3.67886 3.81874 3.93585 4.02265 4.17110 4.24261 4.30467 4.34079 4.39535 4.43857 4.46037 4.58997 4.84786 4.91586 4.94553 5.00042 5.07835 5.09378 5.10965 5.20199 5.27702 5.39626 5.57742 5.77813 6.24968 6.42501 6.66665 6.86673 6.99939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.056 4.056 3 Si 0.806 3.194 4 C 0.029 3.971 5 C -0.205 4.205 6 C -0.116 4.116 7 C -0.067 4.067 8 C 0.588 3.412 9 O -0.570 6.570 10 N -0.715 5.715 11 C 0.148 3.852 12 H 0.073 0.927 13 C -0.120 4.120 14 C -0.147 4.147 15 C 0.104 3.896 16 H 0.068 0.932 17 O -0.579 6.579 18 C -0.113 4.113 19 C -0.114 4.114 20 N -0.513 5.513 21 H 0.399 0.601 22 H 0.116 0.884 23 H -0.295 1.295 24 H -0.285 1.285 25 H 0.170 0.830 26 H 0.146 0.854 27 H 0.407 0.593 28 H 0.044 0.956 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.074 0.926 32 H 0.390 0.610 33 H 0.086 0.914 34 H 0.078 0.922 35 H 0.074 0.926 36 H 0.075 0.925 37 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.642 -0.223 1.251 2.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.165 4.165 3 Si 0.710 3.290 4 C -0.090 4.090 5 C -0.229 4.229 6 C -0.143 4.143 7 C -0.180 4.180 8 C 0.377 3.623 9 O -0.449 6.449 10 N -0.365 5.365 11 C 0.044 3.956 12 H 0.091 0.909 13 C -0.158 4.158 14 C -0.185 4.185 15 C 0.045 3.955 16 H 0.086 0.914 17 O -0.387 6.387 18 C -0.151 4.151 19 C -0.152 4.152 20 N -0.110 5.110 21 H 0.249 0.751 22 H 0.133 0.867 23 H -0.222 1.222 24 H -0.212 1.212 25 H 0.187 0.813 26 H 0.164 0.836 27 H 0.242 0.758 28 H 0.063 0.937 29 H 0.089 0.911 30 H 0.096 0.904 31 H 0.092 0.908 32 H 0.240 0.760 33 H 0.105 0.895 34 H 0.096 0.904 35 H 0.093 0.907 36 H 0.094 0.906 37 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges -2.326 0.123 1.487 2.764 hybrid contribution 0.419 -1.265 0.679 1.496 sum -1.907 -1.142 2.166 3.103 Atomic orbital electron populations 1.86475 1.16841 1.82151 1.50796 1.25083 0.85395 1.11363 0.94696 0.92956 0.77822 0.73682 0.84571 1.21375 1.02978 0.85043 0.99584 1.20948 1.05272 1.01241 0.95436 1.21494 1.00802 0.91390 1.00645 1.20327 1.09075 0.96310 0.92312 1.17266 0.78431 0.82666 0.83929 1.90834 1.46069 1.83862 1.24129 1.45888 1.52496 1.11322 1.26779 1.21035 0.96119 0.81613 0.96834 0.90930 1.21743 0.97025 0.95826 1.01229 1.22203 0.99128 0.95993 1.01188 1.21821 0.94392 0.97421 0.81883 0.91382 1.86466 1.51505 1.77923 1.22840 1.21566 0.97816 0.94860 1.00827 1.21652 0.95877 0.95850 1.01846 1.41904 1.39436 1.11473 1.18202 0.75058 0.86689 1.22243 1.21157 0.81322 0.83591 0.75756 0.93734 0.91104 0.90382 0.90762 0.76039 0.89543 0.90376 0.90694 0.90627 0.73381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.23 12.88 -148.98 -1.92 0.32 16 2 C -0.06 0.23 3.08 71.23 0.22 0.45 16 3 Si 0.81 -4.01 30.54 68.60 2.10 -1.92 16 4 C 0.03 -0.05 6.47 41.34 0.27 0.22 16 5 C -0.21 0.01 9.32 22.01 0.21 0.22 16 6 C -0.12 -0.55 10.65 22.57 0.24 -0.31 16 7 C -0.07 -0.29 7.06 40.35 0.28 -0.01 16 8 C 0.59 4.37 7.75 86.45 0.67 5.04 16 9 O -0.57 -8.88 16.55 -4.34 -0.07 -8.95 16 10 N -0.71 -0.80 5.07 -446.50 -2.27 -3.07 16 11 C 0.15 0.23 2.45 44.99 0.11 0.34 16 12 H 0.07 0.40 7.58 -2.39 -0.02 0.38 16 13 C -0.12 -0.21 5.35 30.60 0.16 -0.05 16 14 C -0.15 0.24 5.64 30.59 0.17 0.41 16 15 C 0.10 -0.27 3.77 30.60 0.12 -0.16 16 16 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 17 O -0.58 0.75 11.97 -148.98 -1.78 -1.04 16 18 C -0.11 0.28 5.67 30.61 0.17 0.46 16 19 C -0.11 0.22 5.25 30.61 0.16 0.38 16 20 N -0.51 0.70 5.99 -171.94 -1.03 -0.33 16 21 H 0.40 -4.47 8.70 -74.06 -0.64 -5.11 16 22 H 0.12 -0.45 7.96 -2.39 -0.02 -0.47 16 23 H -0.29 -0.61 7.11 99.48 0.71 0.09 16 24 H -0.29 -0.16 7.11 99.48 0.71 0.55 16 25 H 0.17 -0.78 6.17 -2.91 -0.02 -0.80 16 26 H 0.15 0.76 8.06 -2.91 -0.02 0.74 16 27 H 0.41 -1.78 7.73 -92.71 -0.72 -2.50 16 28 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 29 H 0.07 0.11 7.68 -2.39 -0.02 0.09 16 30 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.39 -3.02 9.08 -74.06 -0.67 -3.69 16 33 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 34 H 0.08 -0.20 8.14 -2.39 -0.02 -0.21 16 35 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 36 H 0.08 -0.09 7.68 -2.39 -0.02 -0.10 16 37 H 0.43 -2.58 8.19 -92.70 -0.76 -3.34 16 Total: 0.00 -19.55 305.50 -3.82 -23.37 By element: Atomic # 1 Polarization: -13.75 SS G_CDS: -1.63 Total: -15.38 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 2.78 Total: 7.00 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -3.30 Total: -3.40 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -3.77 Total: -9.67 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: 2.10 Total: -1.92 kcal Total: -19.55 -3.82 -23.37 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.356 kcal (2) G-P(sol) polarization free energy of solvation -19.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.821 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.368 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds