Wall clock time and date at job start Tue Mar 9 2021 13:06:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42907 * 114.00069 * 2 1 4 4 H 1.08995 * 112.84741 * 341.20078 * 3 2 1 5 5 C 1.53781 * 113.60933 * 112.50134 * 3 2 1 6 6 C 1.53784 * 87.07845 * 89.11930 * 5 3 2 7 7 H 1.09003 * 113.68603 * 270.86693 * 6 5 3 8 8 C 1.52998 * 113.61276 * 139.97888 * 6 5 3 9 9 N 1.46502 * 109.47261 * 87.50380 * 8 6 5 10 10 C 1.34775 * 120.00142 * 179.97438 * 9 8 6 11 11 O 1.21551 * 120.00128 * 359.97438 * 10 9 8 12 12 C 1.47848 * 119.99984 * 179.97438 * 10 9 8 13 13 C 1.39541 * 120.14107 * 0.02562 * 12 10 9 14 14 C 1.38073 * 119.84306 * 179.97438 * 13 12 10 15 15 Br 1.89100 * 119.93864 * 180.02562 * 14 13 12 16 16 C 1.38424 * 120.12429 * 0.02562 * 14 13 12 17 17 C 1.38365 * 120.28088 * 359.97438 * 16 14 13 18 18 C 1.50699 * 119.91852 * 179.97438 * 17 16 14 19 19 O 1.42903 * 109.47152 * 245.00373 * 18 17 16 20 20 Si 1.86305 * 109.47184 * 4.99845 * 18 17 16 21 21 C 1.37938 * 120.16079 * 0.25921 * 17 16 14 22 22 C 1.53778 * 87.08263 * 25.43185 * 6 5 3 23 23 H 1.09003 * 109.46828 * 59.99754 * 1 2 3 24 24 H 1.08996 * 109.47292 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47155 * 299.99888 * 1 2 3 26 26 H 1.08994 * 113.62085 * 334.57124 * 5 3 2 27 27 H 1.09009 * 113.61156 * 203.66160 * 5 3 2 28 28 H 1.08994 * 109.47474 * 327.50143 * 8 6 5 29 29 H 1.09006 * 109.47354 * 207.49721 * 8 6 5 30 30 H 0.97005 * 119.99813 * 359.97438 * 9 8 6 31 31 H 1.07999 * 120.07716 * 359.97438 * 13 12 10 32 32 H 1.08002 * 119.85752 * 179.97438 * 16 14 13 33 33 H 1.08997 * 109.47198 * 125.00051 * 18 17 16 34 34 H 0.96700 * 114.00311 * 180.02562 * 19 18 17 35 35 H 1.48497 * 110.00233 * 300.00062 * 20 18 17 36 36 H 1.48492 * 109.99800 * 61.32455 * 20 18 17 37 37 H 1.07997 * 120.06534 * 179.72327 * 21 17 16 38 38 H 1.09000 * 113.61733 * 89.11772 * 22 6 5 39 39 H 1.09004 * 113.60985 * 219.93988 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3237 5 6 2.7534 1.6488 1.3018 6 6 4.0061 1.0330 0.6565 7 1 4.1097 -0.0372 0.8354 8 6 5.2909 1.8112 0.9475 9 7 5.8763 1.3352 2.2033 10 6 7.0205 1.8796 2.6624 11 8 7.5670 2.7652 2.0344 12 6 7.6110 1.3996 3.9301 13 6 6.9863 0.3828 4.6532 14 6 7.5434 -0.0611 5.8360 15 35 6.6996 -1.4395 6.8178 16 6 8.7184 0.5009 6.3045 17 6 9.3421 1.5095 5.5916 18 6 10.6208 2.1161 6.1095 19 8 10.3980 3.4889 6.4379 20 14 11.1729 1.1951 7.6320 21 6 8.7932 1.9652 4.4110 22 6 3.3756 1.3720 -0.7045 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 2.3927 1.0963 2.1693 27 1 2.8389 2.7198 1.4863 28 1 5.0610 2.8731 1.0334 29 1 6.0007 1.6576 0.1347 30 1 5.4403 0.6282 2.7044 31 1 6.0693 -0.0560 4.2886 32 1 9.1502 0.1507 7.2304 33 1 11.3925 2.0465 5.3429 34 1 11.1804 3.9439 6.7782 35 1 10.1293 1.2824 8.6848 36 1 11.4387 -0.2269 7.2969 37 1 9.2790 2.7556 3.8581 38 1 3.6311 2.3671 -1.0685 39 1 3.5182 0.5964 -1.4570 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:57 Heat of formation + Delta-G solvation = -48.863824 kcal Electronic energy + Delta-G solvation = -22859.670565 eV Core-core repulsion = 19202.396664 eV Total energy + Delta-G solvation = -3657.273901 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.56930 -40.74561 -39.74952 -37.70261 -37.36165 -35.36280 -33.70215 -33.23631 -30.52969 -29.36963 -27.51333 -27.02183 -26.78202 -25.23497 -23.42838 -22.70811 -21.51407 -20.49082 -18.99614 -18.54487 -17.81672 -17.65500 -17.27765 -16.69825 -16.50704 -16.43802 -16.12443 -16.00379 -15.37180 -15.22819 -14.88203 -14.76224 -14.43582 -14.39233 -14.15217 -13.82513 -13.60662 -13.50915 -12.97229 -12.69400 -12.60779 -12.43691 -12.10686 -11.95070 -11.90533 -11.76146 -11.52355 -11.31847 -10.98573 -10.55992 -10.52830 -10.30655 -10.09043 -9.93433 -5.09301 -0.52590 -0.19087 0.36140 1.13029 1.51398 1.60539 1.83802 2.00168 2.49054 2.60046 3.09065 3.29834 3.45091 3.51508 3.56506 3.66231 3.71191 3.76102 3.85060 3.95171 4.07408 4.16621 4.20041 4.28239 4.38596 4.40150 4.42908 4.57535 4.62896 4.68431 4.70243 4.71532 4.77157 4.91074 4.95763 5.05663 5.07779 5.17145 5.32876 5.40379 6.17065 6.35895 6.50928 7.09688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.077 0.923 5 C -0.156 4.156 6 C -0.118 4.118 7 H 0.101 0.899 8 C 0.128 3.872 9 N -0.723 5.723 10 C 0.561 3.439 11 O -0.527 6.527 12 C -0.126 4.126 13 C -0.054 4.054 14 C -0.093 4.093 15 Br -0.032 7.032 16 C -0.070 4.070 17 C -0.074 4.074 18 C -0.072 4.072 19 O -0.543 6.543 20 Si 0.681 3.319 21 C -0.014 4.014 22 C -0.131 4.131 23 H 0.044 0.956 24 H 0.088 0.912 25 H 0.043 0.957 26 H 0.075 0.925 27 H 0.092 0.908 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.401 0.599 31 H 0.140 0.860 32 H 0.134 0.866 33 H 0.082 0.918 34 H 0.386 0.614 35 H -0.246 1.246 36 H -0.250 1.250 37 H 0.150 0.850 38 H 0.097 0.903 39 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.176 -0.021 0.680 0.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.003 3.997 4 H 0.095 0.905 5 C -0.193 4.193 6 C -0.137 4.137 7 H 0.120 0.880 8 C 0.005 3.995 9 N -0.375 5.375 10 C 0.348 3.652 11 O -0.404 6.404 12 C -0.130 4.130 13 C -0.074 4.074 14 C -0.173 4.173 15 Br 0.053 6.947 16 C -0.090 4.090 17 C -0.075 4.075 18 C -0.183 4.183 19 O -0.350 6.350 20 Si 0.582 3.418 21 C -0.033 4.033 22 C -0.168 4.168 23 H 0.062 0.938 24 H 0.106 0.894 25 H 0.061 0.939 26 H 0.094 0.906 27 H 0.111 0.889 28 H 0.091 0.909 29 H 0.092 0.908 30 H 0.236 0.764 31 H 0.158 0.842 32 H 0.151 0.849 33 H 0.100 0.900 34 H 0.234 0.766 35 H -0.171 1.171 36 H -0.175 1.175 37 H 0.168 0.832 38 H 0.116 0.884 39 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.439 -0.881 0.922 1.349 hybrid contribution -0.606 0.095 -0.384 0.723 sum -1.045 -0.786 0.539 1.414 Atomic orbital electron populations 1.22844 0.80503 1.03084 1.00195 1.87876 1.20043 1.26356 1.94577 1.23045 0.94541 0.85465 0.96667 0.90538 1.23592 0.96105 1.01530 0.98113 1.22764 0.92717 1.00612 0.97615 0.88039 1.21482 0.94089 0.98561 0.85389 1.45907 1.25318 1.40744 1.25552 1.18054 0.80626 0.82054 0.84507 1.90819 1.61241 1.29995 1.58369 1.19981 0.97655 0.98951 0.96420 1.21280 0.98950 0.94753 0.92444 1.21587 0.98222 0.99591 0.97872 1.96830 1.79131 1.46164 1.72550 1.21095 0.93527 0.95572 0.98795 1.19324 0.96595 0.96387 0.95213 1.24659 0.96235 0.88940 1.08451 1.86495 1.39955 1.21303 1.87226 0.95058 0.87607 0.80424 0.78726 1.21283 0.92435 0.96142 0.93484 1.23183 0.94039 1.03167 0.96455 0.93760 0.89360 0.93850 0.90589 0.88909 0.90852 0.90822 0.76374 0.84213 0.84854 0.90006 0.76575 1.17060 1.17459 0.83228 0.88421 0.89985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.43 10.63 -35.23 -0.37 -0.80 16 3 C 0.06 -0.04 4.38 -25.92 -0.11 -0.15 16 4 H 0.08 -0.12 7.87 -51.93 -0.41 -0.53 16 5 C -0.16 0.21 7.46 -25.92 -0.19 0.02 16 6 C -0.12 0.16 3.69 -89.81 -0.33 -0.17 16 7 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 8 C 0.13 -0.03 5.51 -4.04 -0.02 -0.05 16 9 N -0.72 -0.11 5.51 -61.25 -0.34 -0.45 16 10 C 0.56 1.67 7.77 -12.33 -0.10 1.57 16 11 O -0.53 -3.41 16.35 5.32 0.09 -3.33 16 12 C -0.13 -0.26 5.87 -104.97 -0.62 -0.88 16 13 C -0.05 -0.04 9.28 -39.16 -0.36 -0.40 16 14 C -0.09 -0.15 6.22 -39.57 -0.25 -0.40 16 15 Br -0.03 -0.04 33.69 -68.01 -2.29 -2.33 16 16 C -0.07 -0.14 8.40 -39.47 -0.33 -0.47 16 17 C -0.07 -0.14 5.38 -104.69 -0.56 -0.70 16 18 C -0.07 0.04 2.79 36.01 0.10 0.14 16 19 O -0.54 0.10 12.80 -35.23 -0.45 -0.35 16 20 Si 0.68 -1.05 29.84 -169.99 -5.07 -6.12 16 21 C -0.01 -0.04 9.22 -39.18 -0.36 -0.40 16 22 C -0.13 0.17 7.47 -25.92 -0.19 -0.02 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.09 -0.17 7.90 -51.92 -0.41 -0.58 16 28 H 0.07 0.03 7.84 -51.93 -0.41 -0.38 16 29 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.40 -0.81 6.51 -40.82 -0.27 -1.08 16 31 H 0.14 -0.26 6.40 -52.49 -0.34 -0.60 16 32 H 0.13 0.22 4.85 -52.49 -0.25 -0.04 16 33 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 34 H 0.39 -2.03 8.74 45.56 0.40 -1.64 16 35 H -0.25 -0.36 7.05 56.52 0.40 0.04 16 36 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 37 H 0.15 0.41 7.65 -52.49 -0.40 0.01 16 38 H 0.10 -0.23 8.10 -51.93 -0.42 -0.65 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 348.09 15.07 5.25 5.25 Total: 0.00 -7.78 348.09 -10.51 -18.29 By element: Atomic # 1 Polarization: -4.21 SS G_CDS: -5.08 Total: -9.29 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -2.24 Total: -0.85 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.34 Total: -0.45 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.74 Total: -4.48 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.07 Total: -6.12 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.29 Total: -2.33 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -7.78 -10.51 -18.29 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.577 kcal (2) G-P(sol) polarization free energy of solvation -7.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.287 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.864 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds