Wall clock time and date at job start Tue Mar 9 2021 13:08:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42890 * 114.00118 * 2 1 4 4 H 1.09003 * 112.85192 * 18.80148 * 3 2 1 5 5 C 1.53788 * 113.61630 * 150.00261 * 3 2 1 6 6 C 1.53782 * 87.07912 * 89.11396 * 5 3 2 7 7 H 1.09001 * 113.61531 * 270.79718 * 6 5 3 8 8 C 1.53005 * 113.61264 * 139.98414 * 6 5 3 9 9 N 1.46491 * 109.47149 * 174.99942 * 8 6 5 10 10 C 1.34786 * 120.00093 * 180.02562 * 9 8 6 11 11 O 1.21582 * 119.99708 * 359.97438 * 10 9 8 12 12 C 1.47596 * 119.99850 * 179.97438 * 10 9 8 13 13 C 1.39709 * 120.09342 * 0.29812 * 12 10 9 14 14 C 1.37720 * 119.91469 * 180.20828 * 13 12 10 15 15 C 1.50703 * 119.95809 * 179.79266 * 14 13 12 16 16 C 1.38979 * 120.08608 * 359.51211 * 14 13 12 17 17 O 1.35707 * 119.91070 * 180.25371 * 16 14 13 18 18 C 1.39015 * 120.17539 * 0.23787 * 16 14 13 19 19 C 1.50698 * 119.95255 * 180.02562 * 18 16 14 20 20 O 1.42895 * 109.47362 * 284.99772 * 19 18 16 21 21 Si 1.86302 * 109.46923 * 164.99897 * 19 18 16 22 22 C 1.37681 * 120.08983 * 359.97438 * 18 16 14 23 23 C 1.53783 * 87.08324 * 25.43455 * 6 5 3 24 24 H 1.08997 * 109.47038 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.46672 * 300.00202 * 1 2 3 26 26 H 1.09000 * 109.46921 * 60.00209 * 1 2 3 27 27 H 1.08994 * 113.61058 * 334.56170 * 5 3 2 28 28 H 1.09004 * 113.61186 * 203.66323 * 5 3 2 29 29 H 1.09003 * 109.47117 * 54.99048 * 8 6 5 30 30 H 1.09005 * 109.46540 * 294.99994 * 8 6 5 31 31 H 0.97003 * 120.00209 * 359.97438 * 9 8 6 32 32 H 1.08002 * 120.04149 * 359.97241 * 13 12 10 33 33 H 1.09002 * 109.47152 * 269.72132 * 15 14 13 34 34 H 1.09001 * 109.46980 * 149.72232 * 15 14 13 35 35 H 1.09004 * 109.47113 * 29.72213 * 15 14 13 36 36 H 0.96706 * 113.99973 * 90.00439 * 17 16 14 37 37 H 1.09004 * 109.47430 * 45.00124 * 19 18 16 38 38 H 0.96702 * 113.99738 * 300.00338 * 20 19 18 39 39 H 1.48498 * 110.00127 * 58.67778 * 21 19 18 40 40 H 1.48497 * 110.00252 * 180.02562 * 21 19 18 41 41 H 1.08000 * 120.04253 * 180.02562 * 22 18 16 42 42 H 1.09001 * 113.61453 * 89.11770 * 23 6 5 43 43 H 1.08998 * 113.61059 * 220.01726 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3757 1.3718 0.7045 6 6 4.0062 1.0329 -0.6566 7 1 4.1098 -0.0373 -0.8354 8 6 5.2910 1.8110 -0.9476 9 7 5.8763 1.3351 -2.2034 10 6 7.0206 1.8796 -2.6626 11 8 7.5668 2.7659 -2.0347 12 6 7.6105 1.3997 -3.9276 13 6 6.9811 0.3855 -4.6537 14 6 7.5371 -0.0624 -5.8314 15 6 6.8615 -1.1595 -6.6130 16 6 8.7173 0.5000 -6.3029 17 8 9.2593 0.0594 -7.4664 18 6 9.3439 1.5129 -5.5860 19 6 10.6231 2.1195 -6.1022 20 8 11.7034 1.2096 -5.8853 21 14 10.9630 3.7134 -5.1995 22 6 8.7968 1.9632 -4.4056 23 6 2.7535 1.6488 -1.3018 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3632 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 3.5171 0.5957 1.4566 28 1 3.6312 2.3670 1.0684 29 1 6.0008 1.6576 -0.1347 30 1 5.0610 2.8731 -1.0334 31 1 5.4407 0.6277 -2.7041 32 1 6.0618 -0.0492 -4.2900 33 1 7.2405 -2.1269 -6.2834 34 1 7.0700 -1.0303 -7.6751 35 1 5.7852 -1.1149 -6.4460 36 1 8.9505 0.5357 -8.2494 37 1 10.5256 2.3200 -7.1692 38 1 11.8484 0.9858 -4.9558 39 1 11.0665 3.4585 -3.7403 40 1 12.2217 4.3221 -5.6999 41 1 9.2840 2.7504 -3.8494 42 1 2.8390 2.7196 -1.4864 43 1 2.3927 1.0962 -2.1693 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:00 Heat of formation + Delta-G solvation = -99.305446 kcal Electronic energy + Delta-G solvation = -25233.335522 eV Core-core repulsion = 21439.472500 eV Total energy + Delta-G solvation = -3793.863022 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.71181 -40.88867 -40.07364 -37.91403 -37.58215 -37.28998 -35.30429 -34.02544 -32.02733 -29.19534 -28.10057 -27.50058 -26.85969 -26.74478 -24.80830 -23.39022 -22.07319 -21.52382 -20.50124 -19.64498 -18.84033 -18.07563 -17.66062 -17.21065 -16.86861 -16.63370 -16.46640 -16.41436 -16.03145 -15.90389 -15.77540 -15.26689 -14.97263 -14.64059 -14.47265 -14.42439 -14.09544 -13.91754 -13.85347 -13.51559 -13.29892 -13.05927 -13.01332 -12.76262 -12.59243 -12.39872 -11.94244 -11.76712 -11.72015 -11.63816 -11.31698 -10.90288 -10.56611 -10.54331 -10.14797 -9.99849 -9.65822 -4.93818 -0.37490 0.05808 1.26493 1.63889 1.69057 1.98299 2.07370 2.59178 2.60725 3.03746 3.31330 3.42017 3.47532 3.51238 3.60313 3.65882 3.72673 3.75028 3.95505 4.16058 4.16976 4.21532 4.27930 4.37471 4.39121 4.44724 4.52904 4.57976 4.60675 4.62460 4.64625 4.69614 4.71795 4.77581 4.95297 4.98339 5.06408 5.08002 5.09461 5.18725 5.25895 5.40370 5.53022 6.16188 6.42507 6.43146 6.55453 7.17744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.076 0.924 5 C -0.131 4.131 6 C -0.118 4.118 7 H 0.101 0.899 8 C 0.128 3.872 9 N -0.724 5.724 10 C 0.559 3.441 11 O -0.534 6.534 12 C -0.138 4.138 13 C -0.066 4.066 14 C -0.118 4.118 15 C -0.110 4.110 16 C 0.160 3.840 17 O -0.483 6.483 18 C -0.149 4.149 19 C -0.061 4.061 20 O -0.521 6.521 21 Si 0.680 3.320 22 C -0.054 4.054 23 C -0.155 4.155 24 H 0.088 0.912 25 H 0.044 0.956 26 H 0.043 0.957 27 H 0.081 0.919 28 H 0.097 0.903 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.400 0.600 32 H 0.132 0.868 33 H 0.075 0.925 34 H 0.071 0.929 35 H 0.069 0.931 36 H 0.393 0.607 37 H 0.117 0.883 38 H 0.375 0.625 39 H -0.255 1.255 40 H -0.253 1.253 41 H 0.145 0.855 42 H 0.093 0.907 43 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.888 0.108 -1.702 7.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.002 3.998 4 H 0.094 0.906 5 C -0.169 4.169 6 C -0.137 4.137 7 H 0.119 0.881 8 C 0.005 3.995 9 N -0.376 5.376 10 C 0.347 3.653 11 O -0.411 6.411 12 C -0.141 4.141 13 C -0.084 4.084 14 C -0.118 4.118 15 C -0.167 4.167 16 C 0.115 3.885 17 O -0.294 6.294 18 C -0.150 4.150 19 C -0.171 4.171 20 O -0.327 6.327 21 Si 0.581 3.419 22 C -0.072 4.072 23 C -0.192 4.192 24 H 0.106 0.894 25 H 0.062 0.938 26 H 0.062 0.938 27 H 0.100 0.900 28 H 0.116 0.884 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.236 0.764 32 H 0.150 0.850 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.251 0.749 37 H 0.134 0.866 38 H 0.222 0.778 39 H -0.180 1.180 40 H -0.178 1.178 41 H 0.163 0.837 42 H 0.111 0.889 43 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -5.512 0.670 -1.005 5.643 hybrid contribution -0.271 -0.899 -0.042 0.940 sum -5.783 -0.229 -1.047 5.882 Atomic orbital electron populations 1.22844 0.80507 1.03076 1.00196 1.87874 1.20035 1.26379 1.94580 1.23051 0.94545 0.85446 0.96715 0.90560 1.23190 0.94053 1.03153 0.96512 1.22759 0.92771 1.00585 0.97546 0.88099 1.21456 0.94009 0.98508 0.85572 1.45898 1.25458 1.40811 1.25469 1.18147 0.80460 0.81962 0.84780 1.90813 1.61321 1.30279 1.58704 1.19816 0.97689 1.00058 0.96506 1.21103 0.99069 0.94859 0.93409 1.20211 0.94953 0.99678 0.96973 1.20698 0.99871 0.96237 0.99857 1.18309 0.90236 0.91673 0.88332 1.84819 1.68756 1.61108 1.14727 1.20594 0.99191 0.98252 0.96933 1.24830 0.84206 1.01031 1.07070 1.86649 1.50763 1.64216 1.31054 0.94992 0.87075 0.80235 0.79576 1.21151 0.93952 0.98100 0.94032 1.23584 0.96094 1.01518 0.98050 0.89370 0.93765 0.93846 0.90029 0.88427 0.90988 0.90910 0.76404 0.85037 0.90590 0.90961 0.91176 0.74901 0.86558 0.77761 1.17976 1.17815 0.83746 0.88902 0.90622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.37 -0.27 10.63 -35.23 -0.37 -0.65 16 3 C 0.06 -0.07 4.37 -25.91 -0.11 -0.18 16 4 H 0.08 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.13 0.21 7.47 -25.91 -0.19 0.02 16 6 C -0.12 0.21 3.69 -89.80 -0.33 -0.12 16 7 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 8 C 0.13 -0.07 5.51 -4.04 -0.02 -0.10 16 9 N -0.72 0.30 5.51 -61.33 -0.34 -0.04 16 10 C 0.56 1.38 7.76 -12.44 -0.10 1.28 16 11 O -0.53 -3.29 16.34 5.29 0.09 -3.20 16 12 C -0.14 -0.16 5.87 -104.96 -0.62 -0.78 16 13 C -0.07 0.05 9.18 -39.22 -0.36 -0.31 16 14 C -0.12 0.05 5.89 -104.54 -0.62 -0.57 16 15 C -0.11 0.23 9.79 36.01 0.35 0.58 16 16 C 0.16 0.09 6.66 -39.02 -0.26 -0.17 16 17 O -0.48 -0.02 11.84 -18.83 -0.22 -0.24 16 18 C -0.15 -0.12 5.27 -104.54 -0.55 -0.67 16 19 C -0.06 -0.03 2.37 36.00 0.09 0.05 16 20 O -0.52 -1.30 12.88 -35.23 -0.45 -1.75 16 21 Si 0.68 0.19 30.24 -169.99 -5.14 -4.95 16 22 C -0.05 -0.08 8.20 -39.22 -0.32 -0.40 16 23 C -0.15 0.30 7.46 -25.92 -0.19 0.11 16 24 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 25 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.07 -0.01 7.84 -51.93 -0.41 -0.41 16 31 H 0.40 -1.12 6.49 -40.82 -0.27 -1.39 16 32 H 0.13 -0.46 6.39 -52.49 -0.34 -0.79 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.18 7.52 -51.93 -0.39 -0.57 16 35 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 36 H 0.39 -1.79 9.06 45.56 0.41 -1.37 16 37 H 0.12 -0.10 7.82 -51.93 -0.41 -0.50 16 38 H 0.37 -0.02 8.70 45.56 0.40 0.38 16 39 H -0.26 -0.73 6.68 56.52 0.38 -0.35 16 40 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 41 H 0.15 0.30 4.43 -52.49 -0.23 0.06 16 42 H 0.09 -0.23 7.90 -51.93 -0.41 -0.64 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 356.93 15.07 5.38 5.38 Total: 0.00 -9.04 356.93 -8.70 -17.74 By element: Atomic # 1 Polarization: -6.59 SS G_CDS: -5.49 Total: -12.08 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -2.14 Total: -0.20 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.34 Total: -0.04 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -0.96 Total: -5.85 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.14 Total: -4.95 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -9.04 -8.70 -17.74 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.570 kcal (2) G-P(sol) polarization free energy of solvation -9.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds