Wall clock time and date at job start Tue Mar 9 2021 13:08:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42891 * 113.99952 * 2 1 4 4 H 1.08996 * 112.85493 * 341.19773 * 3 2 1 5 5 C 1.53783 * 113.69231 * 112.46415 * 3 2 1 6 6 C 1.53787 * 87.08023 * 89.12410 * 5 3 2 7 7 H 1.08996 * 113.69332 * 270.87590 * 6 5 3 8 8 C 1.53004 * 113.61355 * 139.98452 * 6 5 3 9 9 N 1.46499 * 109.47198 * 87.50373 * 8 6 5 10 10 C 1.34777 * 119.99665 * 180.27868 * 9 8 6 11 11 O 1.21583 * 120.00270 * 359.72083 * 10 9 8 12 12 C 1.47532 * 119.99530 * 179.72393 * 10 9 8 13 13 C 1.40143 * 120.18951 * 179.71859 * 12 10 9 14 14 O 1.35652 * 120.14748 * 0.02562 * 13 12 10 15 15 C 1.38710 * 119.69769 * 179.76964 * 13 12 10 16 16 C 1.50702 * 119.95377 * 180.23259 * 15 13 12 17 17 O 1.42898 * 109.47054 * 285.27485 * 16 15 13 18 18 Si 1.86304 * 109.46927 * 165.27943 * 16 15 13 19 19 C 1.38051 * 120.08709 * 0.51227 * 15 13 12 20 20 C 1.38554 * 120.38741 * 359.74036 * 19 15 13 21 21 C 1.50702 * 119.84713 * 180.02562 * 20 19 15 22 22 C 1.37780 * 120.30076 * 0.02562 * 20 19 15 23 23 C 1.53782 * 87.08149 * 25.43612 * 6 5 3 24 24 H 1.08999 * 109.47474 * 179.97438 * 1 2 3 25 25 H 1.09002 * 109.46784 * 300.00099 * 1 2 3 26 26 H 1.08996 * 109.46923 * 60.00127 * 1 2 3 27 27 H 1.08998 * 113.61533 * 334.57920 * 5 3 2 28 28 H 1.08998 * 113.62034 * 203.67189 * 5 3 2 29 29 H 1.09009 * 109.46730 * 327.50161 * 8 6 5 30 30 H 1.08998 * 109.46846 * 207.50705 * 8 6 5 31 31 H 0.97001 * 119.99790 * 359.97438 * 9 8 6 32 32 H 0.96700 * 114.00053 * 90.00296 * 14 13 12 33 33 H 1.08994 * 109.47749 * 45.28159 * 16 15 13 34 34 H 0.96698 * 114.00342 * 300.00417 * 17 16 15 35 35 H 1.48501 * 110.00162 * 179.97438 * 18 16 15 36 36 H 1.48499 * 109.99924 * 301.31666 * 18 16 15 37 37 H 1.07998 * 119.80806 * 179.76979 * 19 15 13 38 38 H 1.08998 * 109.46922 * 269.97566 * 21 20 19 39 39 H 1.08998 * 109.46920 * 29.97528 * 21 20 19 40 40 H 1.08994 * 109.47079 * 149.97808 * 21 20 19 41 41 H 1.08003 * 120.04802 * 179.97438 * 22 20 19 42 42 H 1.09001 * 113.61616 * 89.11044 * 23 6 5 43 43 H 1.09000 * 113.61435 * 219.93527 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 -0.3237 5 6 2.7531 1.6510 1.3014 6 6 4.0063 1.0351 0.6570 7 1 4.1106 -0.0348 0.8372 8 6 5.2906 1.8145 0.9471 9 7 5.8762 1.3406 2.2035 10 6 7.0168 1.8906 2.6651 11 8 7.5624 2.7766 2.0361 12 6 7.6032 1.4176 3.9335 13 6 8.7922 1.9826 4.4142 14 8 9.4095 2.9679 3.7155 15 6 9.3320 1.5334 5.6104 16 6 10.6075 2.1405 6.1353 17 8 11.7147 1.6559 5.3729 18 14 10.8304 1.6675 7.9235 19 6 8.7054 0.5269 6.3177 20 6 7.5326 -0.0379 5.8432 21 6 6.8585 -1.1354 6.6255 22 6 6.9799 0.3994 4.6593 23 6 3.3756 1.3718 -0.7045 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 2.3927 1.0994 2.1696 28 1 2.8380 2.7222 1.4845 29 1 5.0599 2.8765 1.0314 30 1 6.0005 1.6603 0.1344 31 1 5.4406 0.6340 2.7055 32 1 9.1219 3.8595 3.9550 33 1 10.5552 3.2259 6.0505 34 1 11.8225 0.6954 5.4026 35 1 12.0852 2.2595 8.4529 36 1 9.6700 2.1380 8.7218 37 1 9.1317 0.1781 7.2467 38 1 7.2420 -2.1022 6.2994 39 1 7.0634 -1.0029 7.6878 40 1 5.7828 -1.0951 6.4550 41 1 6.0657 -0.0440 4.2929 42 1 3.6305 2.3667 -1.0698 43 1 3.5189 0.5954 -1.4561 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:20 Heat of formation + Delta-G solvation = -99.056466 kcal Electronic energy + Delta-G solvation = -25382.750744 eV Core-core repulsion = 21588.898518 eV Total energy + Delta-G solvation = -3793.852225 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.70928 -40.81051 -39.74311 -38.00738 -37.60003 -37.26383 -35.15902 -33.10333 -32.90320 -29.24006 -27.66749 -27.46772 -26.79687 -26.76089 -25.01739 -23.40148 -22.00211 -21.47132 -20.46835 -19.56650 -18.38446 -18.10698 -17.41553 -17.32574 -16.80939 -16.61023 -16.49319 -16.35957 -15.99950 -15.92799 -15.47541 -15.21184 -14.89555 -14.66985 -14.59321 -14.39968 -14.15129 -13.85765 -13.73925 -13.50499 -13.38958 -13.05705 -12.95983 -12.63170 -12.55198 -12.14641 -12.03433 -11.92017 -11.74382 -11.64801 -11.28777 -10.77579 -10.55865 -10.34929 -10.19436 -9.97599 -9.52917 -5.09859 -0.33122 0.04995 1.22643 1.58821 1.80527 1.92568 2.13560 2.59902 2.60932 3.18388 3.36600 3.43648 3.49219 3.54203 3.62363 3.66045 3.71139 3.77546 4.04007 4.10407 4.17514 4.22801 4.29733 4.38004 4.39974 4.40926 4.53555 4.57374 4.59921 4.63716 4.68997 4.70704 4.73286 4.79803 4.91092 4.95665 4.96970 5.09893 5.16712 5.21369 5.29599 5.46534 5.56839 6.16917 6.49632 6.61312 6.76980 7.27480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.076 0.924 5 C -0.155 4.155 6 C -0.117 4.117 7 H 0.101 0.899 8 C 0.129 3.871 9 N -0.727 5.727 10 C 0.557 3.443 11 O -0.518 6.518 12 C -0.163 4.163 13 C 0.189 3.811 14 O -0.467 6.467 15 C -0.154 4.154 16 C -0.058 4.058 17 O -0.530 6.530 18 Si 0.683 3.317 19 C -0.073 4.073 20 C -0.097 4.097 21 C -0.117 4.117 22 C -0.068 4.068 23 C -0.131 4.131 24 H 0.088 0.912 25 H 0.043 0.957 26 H 0.044 0.956 27 H 0.075 0.925 28 H 0.092 0.908 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.399 0.601 32 H 0.393 0.607 33 H 0.111 0.889 34 H 0.377 0.623 35 H -0.252 1.252 36 H -0.255 1.255 37 H 0.137 0.863 38 H 0.077 0.923 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.131 0.869 42 H 0.097 0.903 43 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.452 -4.092 3.295 7.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.288 6.288 3 C 0.003 3.997 4 H 0.094 0.906 5 C -0.193 4.193 6 C -0.136 4.136 7 H 0.119 0.881 8 C 0.006 3.994 9 N -0.380 5.380 10 C 0.344 3.656 11 O -0.395 6.395 12 C -0.167 4.167 13 C 0.142 3.858 14 O -0.277 6.277 15 C -0.155 4.155 16 C -0.169 4.169 17 O -0.335 6.335 18 Si 0.584 3.416 19 C -0.091 4.091 20 C -0.097 4.097 21 C -0.174 4.174 22 C -0.086 4.086 23 C -0.169 4.169 24 H 0.106 0.894 25 H 0.061 0.939 26 H 0.062 0.938 27 H 0.094 0.906 28 H 0.110 0.890 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.234 0.766 32 H 0.251 0.749 33 H 0.129 0.871 34 H 0.224 0.776 35 H -0.176 1.176 36 H -0.180 1.180 37 H 0.154 0.846 38 H 0.096 0.904 39 H 0.091 0.909 40 H 0.089 0.911 41 H 0.149 0.851 42 H 0.115 0.885 43 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -4.511 -3.122 3.240 6.371 hybrid contribution -0.982 0.651 -0.039 1.179 sum -5.493 -2.471 3.201 6.821 Atomic orbital electron populations 1.22844 0.80522 1.03076 1.00185 1.87874 1.20021 1.26362 1.94576 1.23045 0.94545 0.85434 0.96703 0.90592 1.23582 0.96167 1.01463 0.98057 1.22753 0.92762 1.00580 0.97496 0.88091 1.21422 0.93958 0.98352 0.85669 1.45905 1.25809 1.40924 1.25361 1.18031 0.80432 0.82331 0.84788 1.90839 1.60543 1.29838 1.58233 1.20413 0.97067 1.01709 0.97527 1.18238 0.88218 0.90900 0.88419 1.84813 1.63978 1.16721 1.62190 1.20741 0.99371 1.00110 0.95290 1.24941 0.84099 1.01281 1.06602 1.86582 1.46669 1.27170 1.73089 0.94976 0.81041 0.91472 0.74109 1.20972 0.94687 0.94603 0.98863 1.19802 0.95641 0.98662 0.95626 1.20841 1.00485 0.96332 0.99702 1.21134 0.99016 0.94695 0.93795 1.23189 0.94022 1.03166 0.96535 0.89355 0.93870 0.93768 0.90649 0.88985 0.91139 0.91035 0.76584 0.74906 0.87135 0.77644 1.17623 1.17989 0.84612 0.90431 0.90928 0.91106 0.85112 0.88463 0.89999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.36 10.64 -35.23 -0.37 -0.73 16 3 C 0.06 -0.05 4.37 -25.91 -0.11 -0.16 16 4 H 0.08 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.16 0.24 7.47 -25.91 -0.19 0.04 16 6 C -0.12 0.15 3.69 -89.80 -0.33 -0.18 16 7 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 8 C 0.13 0.02 5.51 -4.04 -0.02 -0.01 16 9 N -0.73 -0.23 5.51 -61.35 -0.34 -0.57 16 10 C 0.56 1.91 7.76 -12.47 -0.10 1.81 16 11 O -0.52 -3.72 15.16 -16.59 -0.25 -3.97 16 12 C -0.16 -0.33 5.89 -104.84 -0.62 -0.94 16 13 C 0.19 0.52 6.69 -38.69 -0.26 0.27 16 14 O -0.47 -1.95 10.91 -40.54 -0.44 -2.39 16 15 C -0.15 -0.11 5.27 -104.51 -0.55 -0.66 16 16 C -0.06 -0.03 2.37 36.01 0.09 0.06 16 17 O -0.53 -0.94 12.88 -35.23 -0.45 -1.39 16 18 Si 0.68 -0.80 29.91 -169.99 -5.08 -5.88 16 19 C -0.07 0.09 8.30 -39.53 -0.33 -0.24 16 20 C -0.10 0.14 5.87 -104.67 -0.61 -0.47 16 21 C -0.12 0.43 10.00 36.01 0.36 0.79 16 22 C -0.07 0.05 9.18 -39.20 -0.36 -0.31 16 23 C -0.13 0.15 7.47 -25.91 -0.19 -0.04 16 24 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 25 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 29 H 0.07 0.05 7.84 -51.92 -0.41 -0.36 16 30 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 31 H 0.40 -0.86 6.50 -40.82 -0.27 -1.13 16 32 H 0.39 0.28 9.06 45.56 0.41 0.69 16 33 H 0.11 0.10 7.83 -51.93 -0.41 -0.30 16 34 H 0.38 -0.87 8.70 45.56 0.40 -0.47 16 35 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 36 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 37 H 0.14 -0.51 5.10 -52.49 -0.27 -0.78 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 40 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 41 H 0.13 -0.44 6.40 -52.48 -0.34 -0.78 16 42 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 43 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 LS Contribution 356.52 15.07 5.37 5.37 Total: 0.00 -9.84 356.52 -9.24 -19.08 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -5.53 Total: -10.54 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: -2.14 Total: 1.02 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.34 Total: -0.57 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -1.52 Total: -8.49 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.08 Total: -5.88 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.84 -9.24 -19.08 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.973 kcal (2) G-P(sol) polarization free energy of solvation -9.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds