Wall clock time and date at job start Tue Mar 9 2021 13:10:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 114.00493 * 2 1 4 4 H 1.09002 * 112.90303 * 341.25226 * 3 2 1 5 5 C 1.53950 * 113.53667 * 112.50422 * 3 2 1 6 6 C 1.53778 * 87.02008 * 89.19336 * 5 3 2 7 7 H 1.09000 * 113.61324 * 270.77276 * 6 5 3 8 8 C 1.53000 * 113.61854 * 139.94859 * 6 5 3 9 9 N 1.46499 * 109.46840 * 85.86223 * 8 6 5 10 10 C 1.34779 * 119.99872 * 180.02562 * 9 8 6 11 11 O 1.21278 * 120.00071 * 359.97438 * 10 9 8 12 12 C 1.50703 * 119.99944 * 180.02562 * 10 9 8 13 13 O 1.42903 * 109.46904 * 180.02562 * 12 10 9 14 14 C 1.35916 * 116.99574 * 179.97438 * 13 12 10 15 15 C 1.38790 * 120.05515 * 179.72220 * 14 13 12 16 16 Br 1.89097 * 120.03734 * 0.02562 * 15 14 13 17 17 C 1.38244 * 119.92568 * 179.81419 * 15 14 13 18 18 C 1.38239 * 120.04422 * 0.44180 * 17 15 14 19 19 C 1.50710 * 119.93927 * 179.77108 * 18 17 15 20 20 O 1.42900 * 109.46717 * 245.02060 * 19 18 17 21 21 Si 1.86299 * 109.47169 * 5.01661 * 19 18 17 22 22 C 1.38278 * 120.12097 * 359.78868 * 18 17 15 23 23 C 1.38143 * 120.07066 * 0.02562 * 22 18 17 24 24 C 1.53777 * 113.61724 * 210.00387 * 3 2 1 25 25 H 1.09003 * 109.47240 * 59.99744 * 1 2 3 26 26 H 1.08995 * 109.47305 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46597 * 299.99751 * 1 2 3 28 28 H 1.09003 * 113.67167 * 334.66533 * 5 3 2 29 29 H 1.09005 * 113.61369 * 203.71057 * 5 3 2 30 30 H 1.09002 * 109.47398 * 205.86550 * 8 6 5 31 31 H 1.09001 * 109.47194 * 325.86730 * 8 6 5 32 32 H 0.97000 * 120.00420 * 0.02562 * 9 8 6 33 33 H 1.09002 * 109.47152 * 300.00160 * 12 10 9 34 34 H 1.09001 * 109.46980 * 60.00059 * 12 10 9 35 35 H 1.07999 * 119.97762 * 180.23524 * 17 15 14 36 36 H 1.08997 * 109.47240 * 125.02167 * 19 18 17 37 37 H 0.96696 * 114.00158 * 180.02562 * 20 19 18 38 38 H 1.48493 * 110.00006 * 300.00651 * 21 19 18 39 39 H 1.48504 * 109.99471 * 61.32433 * 21 19 18 40 40 H 1.07999 * 119.96760 * 179.97438 * 22 18 17 41 41 H 1.08002 * 120.02598 * 179.97438 * 23 22 18 42 42 H 1.09001 * 113.61353 * 156.33394 * 24 3 2 43 43 H 1.08998 * 113.69291 * 25.43911 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7539 1.6472 1.3039 6 6 4.0062 1.0329 0.6565 7 1 4.1098 -0.0373 0.8353 8 6 5.2910 1.8110 0.9473 9 7 5.8569 1.3605 2.2214 10 6 6.9971 1.9102 2.6842 11 8 7.5550 2.7774 2.0457 12 6 7.5795 1.4464 3.9945 13 8 8.7789 2.1741 4.2668 14 6 9.4334 1.8753 5.4199 15 6 10.6081 2.5394 5.7445 16 35 11.2996 3.8620 4.5833 17 6 11.2696 2.2361 6.9199 18 6 10.7668 1.2660 7.7666 19 6 11.4927 0.9336 9.0448 20 8 11.9739 -0.4106 8.9835 21 14 12.9301 2.0984 9.2636 22 6 9.5992 0.5997 7.4427 23 6 8.9321 0.9016 6.2713 24 6 3.3756 1.3718 -0.7046 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3632 0.5138 0.8900 28 1 2.3942 1.0932 2.1710 29 1 2.8393 2.7179 1.4901 30 1 6.0109 1.6358 0.1478 31 1 5.0655 2.8758 1.0063 32 1 5.4109 0.6667 2.7319 33 1 6.8596 1.6208 4.7941 34 1 7.8056 0.3817 3.9350 35 1 12.1817 2.7551 7.1751 36 1 10.8097 1.0368 9.8879 37 1 12.4522 -0.6936 9.7748 38 1 13.8687 1.9672 8.1204 39 1 12.4401 3.4969 9.3607 40 1 9.2088 -0.1581 8.1058 41 1 8.0204 0.3805 6.0188 42 1 3.6311 2.3670 -1.0685 43 1 3.5183 0.5963 -1.4571 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12896214_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:01 Heat of formation + Delta-G solvation = -80.959116 kcal Electronic energy + Delta-G solvation = -26293.559702 eV Core-core repulsion = 22160.674234 eV Total energy + Delta-G solvation = -4132.885468 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.061 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.77881 -40.99145 -40.29623 -39.09552 -37.38667 -37.22548 -35.33708 -33.66852 -32.35838 -30.98262 -30.23617 -28.44743 -27.29841 -26.66543 -26.27765 -24.29733 -23.49334 -22.35429 -21.79597 -20.46275 -19.66612 -18.69273 -18.32654 -17.62852 -17.47930 -17.33148 -17.01476 -16.63285 -16.52672 -16.28969 -16.24272 -15.91411 -15.40374 -15.20477 -14.90294 -14.57162 -14.41183 -14.28970 -14.20249 -13.92251 -13.78244 -13.72226 -13.38183 -12.90362 -12.56625 -12.51660 -12.33365 -12.22955 -12.15261 -11.88633 -11.87664 -11.67053 -11.37375 -11.26452 -10.98549 -10.48759 -10.31452 -10.22694 -10.14782 -9.42603 -5.01017 -0.18206 -0.05290 0.46448 1.27595 1.33720 1.40592 1.59266 1.95128 2.25864 2.43660 2.70508 3.27058 3.38426 3.55379 3.56545 3.60451 3.74766 3.77968 3.79788 3.86033 3.96283 3.97903 4.00713 4.19574 4.24159 4.30741 4.32502 4.52359 4.53492 4.58909 4.60709 4.67387 4.72450 4.76306 4.84154 4.87020 4.92206 5.04918 5.14891 5.18074 5.23261 5.33763 5.40528 5.95659 6.26145 6.39838 6.92711 7.08172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.392 6.392 3 C 0.054 3.946 4 H 0.084 0.916 5 C -0.148 4.148 6 C -0.106 4.106 7 H 0.104 0.896 8 C 0.132 3.868 9 N -0.707 5.707 10 C 0.510 3.490 11 O -0.571 6.571 12 C 0.032 3.968 13 O -0.304 6.304 14 C 0.150 3.850 15 C -0.142 4.142 16 Br -0.050 7.050 17 C -0.076 4.076 18 C -0.120 4.120 19 C -0.059 4.059 20 O -0.560 6.560 21 Si 0.751 3.249 22 C -0.029 4.029 23 C -0.190 4.190 24 C -0.134 4.134 25 H 0.048 0.952 26 H 0.093 0.907 27 H 0.050 0.950 28 H 0.078 0.922 29 H 0.097 0.903 30 H 0.058 0.942 31 H 0.064 0.936 32 H 0.420 0.580 33 H 0.133 0.867 34 H 0.130 0.870 35 H 0.122 0.878 36 H 0.109 0.891 37 H 0.405 0.595 38 H -0.302 1.302 39 H -0.291 1.291 40 H 0.169 0.831 41 H 0.182 0.818 42 H 0.104 0.896 43 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.882 -6.044 6.962 11.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.311 6.311 3 C -0.004 4.004 4 H 0.102 0.898 5 C -0.185 4.185 6 C -0.124 4.124 7 H 0.122 0.878 8 C 0.009 3.991 9 N -0.361 5.361 10 C 0.296 3.704 11 O -0.449 6.449 12 C -0.045 4.045 13 O -0.216 6.216 14 C 0.102 3.898 15 C -0.222 4.222 16 Br 0.035 6.965 17 C -0.095 4.095 18 C -0.121 4.121 19 C -0.170 4.170 20 O -0.371 6.371 21 Si 0.659 3.341 22 C -0.047 4.047 23 C -0.209 4.209 24 C -0.172 4.172 25 H 0.067 0.933 26 H 0.112 0.888 27 H 0.069 0.931 28 H 0.097 0.903 29 H 0.115 0.885 30 H 0.076 0.924 31 H 0.082 0.918 32 H 0.258 0.742 33 H 0.151 0.849 34 H 0.148 0.852 35 H 0.139 0.861 36 H 0.127 0.873 37 H 0.257 0.743 38 H -0.230 1.230 39 H -0.218 1.218 40 H 0.186 0.814 41 H 0.199 0.801 42 H 0.123 0.877 43 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -5.922 -4.253 5.006 8.844 hybrid contribution -0.707 -0.094 -0.214 0.745 sum -6.630 -4.347 4.792 9.263 Atomic orbital electron populations 1.22960 0.79616 1.03698 1.00779 1.87835 1.21169 1.27352 1.94739 1.23198 0.94767 0.85164 0.97296 0.89826 1.23568 0.95452 1.01805 0.97711 1.22650 0.91928 1.00419 0.97434 0.87815 1.21389 0.94466 0.98588 0.84676 1.45672 1.24608 1.41938 1.23929 1.20479 0.81108 0.81778 0.87005 1.90787 1.61338 1.32768 1.60031 1.22877 0.86658 0.98542 0.96431 1.86242 1.38023 1.60822 1.36538 1.18751 0.90644 0.93977 0.86393 1.21073 0.99320 1.03218 0.98639 1.96741 1.85464 1.51095 1.63227 1.20769 0.98420 0.98081 0.92253 1.19614 0.97718 0.97778 0.97020 1.24474 1.04729 0.91684 0.96142 1.86433 1.76987 1.26918 1.46720 0.94698 0.78208 0.75869 0.85309 1.21323 0.91803 0.96149 0.95388 1.21720 1.04048 0.99468 0.95692 1.23230 0.94105 1.03394 0.96473 0.93314 0.88810 0.93141 0.90290 0.88453 0.92362 0.91789 0.74186 0.84949 0.85223 0.86052 0.87322 0.74290 1.22996 1.21836 0.81356 0.80126 0.87728 0.90752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.09 10.85 113.37 1.23 1.14 16 2 O -0.39 -0.44 10.63 -148.98 -1.58 -2.02 16 3 C 0.05 -0.13 4.38 31.18 0.14 0.00 16 4 H 0.08 -0.35 7.87 -2.39 -0.02 -0.37 16 5 C -0.15 0.72 7.47 31.18 0.23 0.95 16 6 C -0.11 0.45 3.68 -10.27 -0.04 0.41 16 7 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 8 C 0.13 -0.16 5.50 86.38 0.47 0.31 16 9 N -0.71 2.35 5.56 -463.05 -2.57 -0.22 16 10 C 0.51 1.87 7.91 87.66 0.69 2.56 16 11 O -0.57 -9.05 16.50 16.01 0.26 -8.79 16 12 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 13 O -0.30 -2.29 9.00 -73.56 -0.66 -2.95 16 14 C 0.15 0.90 6.68 22.52 0.15 1.05 16 15 C -0.14 -1.45 6.24 22.40 0.14 -1.31 16 16 Br -0.05 -0.66 33.16 -20.37 -0.68 -1.34 16 17 C -0.08 -0.62 8.40 22.27 0.19 -0.43 16 18 C -0.12 -0.36 5.38 -19.85 -0.11 -0.46 16 19 C -0.06 0.16 2.79 71.24 0.20 0.36 16 20 O -0.56 1.72 12.81 -148.98 -1.91 -0.19 16 21 Si 0.75 -0.74 29.85 68.60 2.05 1.30 16 22 C -0.03 0.04 9.68 22.26 0.22 0.26 16 23 C -0.19 0.34 9.04 22.36 0.20 0.54 16 24 C -0.13 0.41 7.48 31.12 0.23 0.64 16 25 H 0.05 -0.22 8.14 -2.39 -0.02 -0.23 16 26 H 0.09 -0.46 8.14 -2.39 -0.02 -0.47 16 27 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 28 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 29 H 0.10 -0.55 7.92 -2.38 -0.02 -0.57 16 30 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 31 H 0.06 0.06 7.88 -2.39 -0.02 0.04 16 32 H 0.42 -4.46 8.47 -92.71 -0.79 -5.25 16 33 H 0.13 -1.33 7.66 -2.39 -0.02 -1.35 16 34 H 0.13 -1.22 7.66 -2.39 -0.02 -1.24 16 35 H 0.12 1.13 4.86 -2.91 -0.01 1.11 16 36 H 0.11 -0.92 7.96 -2.39 -0.02 -0.94 16 37 H 0.41 -5.40 8.74 -74.06 -0.65 -6.05 16 38 H -0.30 -2.38 7.05 99.48 0.70 -1.68 16 39 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 40 H 0.17 -1.23 8.06 -2.91 -0.02 -1.26 16 41 H 0.18 -1.90 6.30 -2.91 -0.02 -1.92 16 42 H 0.10 -0.49 8.10 -2.39 -0.02 -0.51 16 43 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 Total: 0.00 -29.48 380.83 -1.12 -30.60 By element: Atomic # 1 Polarization: -22.34 SS G_CDS: -0.35 Total: -22.69 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: 4.32 Total: 6.30 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -2.57 Total: -0.22 kcal Atomic # 8 Polarization: -10.06 SS G_CDS: -3.89 Total: -13.95 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.05 Total: 1.30 kcal Atomic # 35 Polarization: -0.66 SS G_CDS: -0.68 Total: -1.34 kcal Total: -29.48 -1.12 -30.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.359 kcal (2) G-P(sol) polarization free energy of solvation -29.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.959 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds