Wall clock time and date at job start Tue Mar 9 2021 13:10:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42905 * 114.00012 * 2 1 4 4 H 1.08991 * 112.90682 * 341.24887 * 3 2 1 5 5 C 1.53784 * 113.61515 * 112.50311 * 3 2 1 6 6 C 1.53773 * 87.08123 * 89.11494 * 5 3 2 7 7 H 1.08999 * 113.69296 * 270.87139 * 6 5 3 8 8 C 1.53003 * 113.61637 * 139.98254 * 6 5 3 9 9 N 1.46503 * 109.47331 * 87.49882 * 8 6 5 10 10 C 1.34776 * 119.99981 * 180.02562 * 9 8 6 11 11 O 1.21280 * 119.99924 * 359.97438 * 10 9 8 12 12 C 1.50699 * 119.99696 * 180.02562 * 10 9 8 13 13 N 1.46500 * 109.46884 * 179.97438 * 12 10 9 14 14 C 1.36832 * 125.06170 * 265.02446 * 13 12 10 15 15 C 1.34234 * 109.93820 * 179.97438 * 14 13 12 16 16 C 1.50703 * 126.50189 * 179.97438 * 15 14 13 17 17 O 1.42899 * 109.47479 * 255.00119 * 16 15 14 18 18 Si 1.86299 * 109.46870 * 15.00500 * 16 15 14 19 19 C 1.46491 * 106.99956 * 359.97438 * 15 14 13 20 20 C 1.39596 * 134.03251 * 179.97438 * 19 15 14 21 21 C 1.36660 * 119.76020 * 179.97438 * 20 19 15 22 22 C 1.38795 * 120.52817 * 0.02652 * 21 20 19 23 23 C 1.37779 * 120.66827 * 359.96957 * 22 21 20 24 24 C 1.37691 * 125.06503 * 85.01906 * 13 12 10 25 25 C 1.53781 * 87.08704 * 25.43050 * 6 5 3 26 26 H 1.09000 * 109.46945 * 60.00388 * 1 2 3 27 27 H 1.08998 * 109.47395 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47108 * 300.00465 * 1 2 3 29 29 H 1.08994 * 113.61422 * 334.56174 * 5 3 2 30 30 H 1.09000 * 113.61277 * 203.66603 * 5 3 2 31 31 H 1.09004 * 109.46449 * 327.49812 * 8 6 5 32 32 H 1.09001 * 109.47324 * 207.49886 * 8 6 5 33 33 H 0.96999 * 119.99468 * 0.02562 * 9 8 6 34 34 H 1.08991 * 109.47499 * 59.99958 * 12 10 9 35 35 H 1.09001 * 109.46854 * 299.99453 * 12 10 9 36 36 H 1.07993 * 125.03284 * 359.95697 * 14 13 12 37 37 H 1.09007 * 109.46903 * 135.00234 * 16 15 14 38 38 H 0.96703 * 113.99853 * 179.97438 * 17 16 15 39 39 H 1.48497 * 109.99792 * 299.99529 * 18 16 15 40 40 H 1.48504 * 110.00278 * 61.31537 * 18 16 15 41 41 H 1.07994 * 120.12169 * 0.02578 * 20 19 15 42 42 H 1.08001 * 119.73483 * 180.02562 * 21 20 19 43 43 H 1.07999 * 119.66344 * 179.70368 * 22 21 20 44 44 H 1.08001 * 120.11280 * 179.97438 * 23 22 21 45 45 H 1.09006 * 113.61168 * 89.11203 * 25 6 5 46 46 H 1.08997 * 113.61793 * 219.93613 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7534 1.6489 1.3018 6 6 4.0061 1.0331 0.6566 7 1 4.1097 -0.0371 0.8354 8 6 5.2909 1.8112 0.9475 9 7 5.8763 1.3354 2.2034 10 6 7.0200 1.8805 2.6630 11 8 7.5648 2.7647 2.0366 12 6 7.6224 1.3906 3.9545 13 7 8.8526 2.1358 4.2331 14 6 10.1140 1.7229 3.9007 15 6 11.0141 2.6364 4.2973 16 6 12.5086 2.5583 4.1198 17 8 13.1210 2.2399 5.3710 18 14 12.9175 1.2351 2.8737 19 6 10.2681 3.7236 4.9355 20 6 10.6339 4.9301 5.5350 21 6 9.6707 5.7501 6.0522 22 6 8.3311 5.3929 5.9867 23 6 7.9480 4.2069 5.3994 24 6 8.9116 3.3560 4.8684 25 6 3.3756 1.3718 -0.7045 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 2.3926 1.0965 2.1693 30 1 2.8389 2.7198 1.4862 31 1 5.0609 2.8733 1.0332 32 1 6.0007 1.6576 0.1347 33 1 5.4406 0.6280 2.7041 34 1 7.8528 0.3289 3.8683 35 1 6.9125 1.5436 4.7675 36 1 10.3506 0.7987 3.3945 37 1 12.8831 3.5189 3.7660 38 1 14.0849 2.1729 5.3314 39 1 12.4121 -0.0795 3.3444 40 1 12.3128 1.5707 1.5595 41 1 11.6743 5.2147 5.5892 42 1 9.9542 6.6836 6.5155 43 1 7.5819 6.0492 6.4041 44 1 6.9031 3.9376 5.3537 45 1 3.6311 2.3670 -1.0685 46 1 3.5183 0.5963 -1.4570 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:32 Heat of formation + Delta-G solvation = -9.131759 kcal Electronic energy + Delta-G solvation = -27803.390936 eV Core-core repulsion = 23854.704520 eV Total energy + Delta-G solvation = -3948.686416 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.46530 -41.08208 -40.24558 -37.95802 -37.58225 -37.32758 -35.32535 -34.12586 -31.50941 -30.18951 -29.89097 -28.40003 -27.44285 -26.82493 -25.56078 -23.88866 -23.47667 -22.53086 -21.71755 -20.62270 -20.39965 -18.68855 -18.22760 -18.14785 -17.68791 -17.48593 -16.80159 -16.76872 -16.58572 -16.32951 -16.15891 -15.66496 -15.39541 -15.29375 -14.87212 -14.69412 -14.62866 -14.51287 -14.34297 -14.08109 -13.97866 -13.57359 -13.45531 -13.37983 -12.99461 -12.66206 -12.61026 -12.44839 -12.31953 -12.00979 -11.87922 -11.81409 -11.63487 -11.38416 -11.04619 -10.61577 -10.41093 -10.22719 -10.09118 -9.01453 -8.52348 -4.94167 0.28478 0.80738 1.39095 1.41245 1.45523 1.62310 1.77936 2.06506 2.14840 2.54606 3.11758 3.34165 3.41030 3.48122 3.55253 3.61490 3.69050 3.70642 3.77470 3.83239 3.85786 4.10261 4.11698 4.16844 4.33037 4.34050 4.35220 4.37948 4.48240 4.51089 4.56527 4.62564 4.66137 4.70846 4.71683 4.79580 4.89337 4.91504 4.99991 5.01473 5.10291 5.26300 5.30152 5.65399 5.81105 5.86726 5.90222 6.11703 6.15729 6.31697 6.38205 6.82051 7.01878 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.077 0.923 5 C -0.155 4.155 6 C -0.117 4.117 7 H 0.101 0.899 8 C 0.129 3.871 9 N -0.726 5.726 10 C 0.489 3.511 11 O -0.515 6.515 12 C 0.091 3.909 13 N -0.465 5.465 14 C 0.065 3.935 15 C -0.151 4.151 16 C -0.032 4.032 17 O -0.547 6.547 18 Si 0.681 3.319 19 C -0.085 4.085 20 C -0.063 4.063 21 C -0.146 4.146 22 C -0.096 4.096 23 C -0.127 4.127 24 C 0.109 3.891 25 C -0.131 4.131 26 H 0.044 0.956 27 H 0.088 0.912 28 H 0.043 0.957 29 H 0.075 0.925 30 H 0.092 0.908 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.403 0.597 34 H 0.121 0.879 35 H 0.120 0.880 36 H 0.162 0.838 37 H 0.070 0.930 38 H 0.378 0.622 39 H -0.254 1.254 40 H -0.256 1.256 41 H 0.123 0.877 42 H 0.124 0.876 43 H 0.126 0.874 44 H 0.115 0.885 45 H 0.097 0.903 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.360 -2.257 -0.300 3.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.003 3.997 4 H 0.095 0.905 5 C -0.193 4.193 6 C -0.136 4.136 7 H 0.120 0.880 8 C 0.005 3.995 9 N -0.380 5.380 10 C 0.273 3.727 11 O -0.389 6.389 12 C -0.035 4.035 13 N -0.148 5.148 14 C -0.060 4.060 15 C -0.158 4.158 16 C -0.143 4.143 17 O -0.353 6.353 18 Si 0.582 3.418 19 C -0.090 4.090 20 C -0.082 4.082 21 C -0.165 4.165 22 C -0.115 4.115 23 C -0.148 4.148 24 C 0.005 3.995 25 C -0.169 4.169 26 H 0.063 0.937 27 H 0.107 0.893 28 H 0.062 0.938 29 H 0.094 0.906 30 H 0.110 0.890 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.237 0.763 34 H 0.139 0.861 35 H 0.138 0.862 36 H 0.179 0.821 37 H 0.088 0.912 38 H 0.225 0.775 39 H -0.179 1.179 40 H -0.180 1.180 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.144 0.856 44 H 0.133 0.867 45 H 0.115 0.885 46 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -3.066 -2.570 -1.201 4.177 hybrid contribution -1.027 0.112 0.336 1.087 sum -4.093 -2.459 -0.865 4.852 Atomic orbital electron populations 1.22849 0.80450 1.03117 1.00222 1.87873 1.20093 1.26317 1.94576 1.23039 0.94533 0.85499 0.96633 0.90517 1.23578 0.96095 1.01463 0.98117 1.22751 0.92665 1.00553 0.97600 0.88045 1.21446 0.94043 0.98479 0.85490 1.45952 1.25460 1.40923 1.25628 1.21003 0.81193 0.83115 0.87412 1.90812 1.60627 1.29397 1.58112 1.21601 0.87136 0.97869 0.96893 1.43174 1.04664 1.17195 1.49803 1.21412 0.82818 0.99401 1.02387 1.19533 0.92630 0.95783 1.07854 1.23940 0.90016 1.06860 0.93530 1.86540 1.24344 1.93544 1.30825 0.95381 0.91138 0.77956 0.77297 1.18928 0.91300 0.95802 1.02927 1.20280 0.99627 0.92029 0.96234 1.20670 0.92764 1.00386 1.02635 1.20825 0.96370 0.95558 0.98782 1.19952 0.97175 0.94808 1.02820 1.18172 0.95370 0.86841 0.99128 1.23190 0.94098 1.03159 0.96494 0.93728 0.89323 0.93842 0.90580 0.88989 0.91088 0.91142 0.76297 0.86078 0.86243 0.82089 0.91173 0.77525 1.17893 1.18021 0.85871 0.85800 0.85637 0.86686 0.88481 0.89989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.37 -0.30 10.63 -35.23 -0.37 -0.68 16 3 C 0.06 -0.06 4.37 -25.91 -0.11 -0.17 16 4 H 0.08 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.15 0.29 7.46 -25.92 -0.19 0.09 16 6 C -0.12 0.21 3.69 -89.81 -0.33 -0.12 16 7 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 8 C 0.13 -0.08 5.51 -4.04 -0.02 -0.10 16 9 N -0.73 0.91 5.56 -60.29 -0.33 0.58 16 10 C 0.49 0.83 7.90 -10.99 -0.09 0.74 16 11 O -0.52 -3.52 16.42 5.56 0.09 -3.43 16 12 C 0.09 -0.04 6.48 -5.19 -0.03 -0.07 16 13 N -0.47 -1.71 2.27 -115.72 -0.26 -1.97 16 14 C 0.06 0.27 9.89 -16.73 -0.17 0.11 16 15 C -0.15 -0.76 5.61 -102.71 -0.58 -1.34 16 16 C -0.03 -0.07 3.05 36.01 0.11 0.04 16 17 O -0.55 -1.07 12.86 -35.23 -0.45 -1.52 16 18 Si 0.68 0.19 30.79 -169.99 -5.23 -5.04 16 19 C -0.09 -0.51 6.35 -105.14 -0.67 -1.17 16 20 C -0.06 -0.29 10.05 -39.65 -0.40 -0.68 16 21 C -0.15 -0.47 9.97 -39.95 -0.40 -0.87 16 22 C -0.10 -0.29 10.01 -39.54 -0.40 -0.68 16 23 C -0.13 -0.47 10.00 -39.43 -0.39 -0.87 16 24 C 0.11 0.57 6.80 -83.99 -0.57 0.00 16 25 C -0.13 0.19 7.47 -25.92 -0.19 0.00 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 31 H 0.07 0.03 7.84 -51.93 -0.41 -0.38 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.40 -1.67 8.47 -40.82 -0.35 -2.02 16 34 H 0.12 -0.41 8.12 -51.93 -0.42 -0.83 16 35 H 0.12 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.16 0.37 6.30 -52.49 -0.33 0.04 16 37 H 0.07 0.07 7.96 -51.93 -0.41 -0.34 16 38 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 39 H -0.25 -0.63 7.04 56.52 0.40 -0.23 16 40 H -0.26 -0.88 7.11 56.52 0.40 -0.48 16 41 H 0.12 0.36 8.06 -52.49 -0.42 -0.06 16 42 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 43 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 44 H 0.12 0.19 8.06 -52.49 -0.42 -0.23 16 45 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 386.82 15.07 5.83 5.83 Total: 0.00 -11.44 386.82 -11.11 -22.55 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -7.03 Total: -12.27 kcal Atomic # 6 Polarization: -0.71 SS G_CDS: -3.34 Total: -4.05 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -0.60 Total: -1.39 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -0.74 Total: -5.62 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.23 Total: -5.04 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.44 -11.11 -22.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.415 kcal (2) G-P(sol) polarization free energy of solvation -11.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.132 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds