Wall clock time and date at job start Tue Mar 9 2021 13:13:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.46898 * 2 1 4 4 C 1.50697 * 109.47047 * 240.00360 * 2 1 3 5 5 C 1.33744 * 125.11897 * 300.02097 * 4 2 1 6 6 C 1.37797 * 115.08266 * 179.73559 * 5 4 2 7 7 C 1.34981 * 114.69941 * 0.49610 * 6 5 4 8 8 C 1.47558 * 125.27662 * 179.79697 * 7 6 5 9 9 C 1.39822 * 120.00295 * 179.72498 * 8 7 6 10 10 C 1.36557 * 120.00605 * 180.02562 * 9 8 7 11 11 C 1.39834 * 119.99673 * 359.97234 * 10 9 8 12 12 C 1.47566 * 119.99988 * 180.02562 * 11 10 9 13 13 O 1.21595 * 119.99549 * 0.02562 * 12 11 10 14 14 N 1.34772 * 119.99664 * 180.02562 * 12 11 10 15 15 C 1.46502 * 119.99508 * 185.40897 * 14 12 11 16 16 C 1.50697 * 112.91029 * 284.27740 * 15 14 12 17 17 C 1.38234 * 120.00275 * 166.65958 * 16 15 14 18 18 C 1.38232 * 120.00073 * 179.74206 * 17 16 15 19 19 C 1.38236 * 120.00133 * 0.53357 * 18 17 16 20 20 C 1.38233 * 119.99606 * 359.74134 * 19 18 17 21 21 C 1.38237 * 120.00566 * 359.97438 * 20 19 18 22 22 C 1.53790 * 113.61160 * 153.02617 * 15 14 12 23 23 C 1.53782 * 87.08206 * 270.88278 * 22 15 14 24 24 H 1.09001 * 113.61168 * 89.11458 * 23 22 15 25 25 F 1.39897 * 113.61583 * 220.01930 * 23 22 15 26 26 C 1.53781 * 113.61572 * 55.53077 * 15 14 12 27 27 C 1.39826 * 119.99998 * 0.27951 * 11 10 9 28 28 C 1.36564 * 119.99256 * 359.43892 * 27 11 10 29 29 S 1.75863 * 125.12055 * 120.02313 * 4 2 1 30 30 H 0.96701 * 114.00271 * 60.00137 * 1 2 3 31 31 H 1.08995 * 109.47144 * 120.00232 * 2 1 3 32 32 H 1.48499 * 110.00020 * 298.68220 * 3 2 1 33 33 H 1.48500 * 109.99798 * 60.00287 * 3 2 1 34 34 H 1.08000 * 122.45733 * 359.97438 * 5 4 2 35 35 H 1.08003 * 122.65546 * 180.29829 * 6 5 4 36 36 H 1.08005 * 119.99546 * 359.97438 * 9 8 7 37 37 H 1.08003 * 120.00119 * 179.97438 * 10 9 8 38 38 H 0.96995 * 120.00499 * 5.40803 * 14 12 11 39 39 H 1.08006 * 119.99867 * 0.02562 * 17 16 15 40 40 H 1.08001 * 120.00185 * 180.29719 * 18 17 16 41 41 H 1.07991 * 120.00204 * 179.76628 * 19 18 17 42 42 H 1.08005 * 120.00101 * 179.97438 * 20 19 18 43 43 H 1.07996 * 120.00550 * 180.02562 * 21 20 19 44 44 H 1.08998 * 113.61431 * 156.33493 * 22 15 14 45 45 H 1.08999 * 113.61237 * 25.43293 * 22 15 14 46 46 H 1.09007 * 113.61452 * 334.56810 * 26 15 14 47 47 H 1.09004 * 113.61506 * 203.66056 * 26 15 14 48 48 H 1.07996 * 120.00489 * 179.72816 * 27 11 10 49 49 H 1.08007 * 119.99573 * 180.27420 * 28 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6717 -1.9845 -1.5432 6 6 2.2325 -2.4223 -2.7232 7 6 2.9672 -1.4970 -3.3760 8 6 3.6726 -1.7152 -4.6535 9 6 4.3998 -0.6735 -5.2374 10 6 5.0523 -0.8752 -6.4200 11 6 4.9935 -2.1238 -7.0468 12 6 5.6989 -2.3420 -8.3244 13 8 6.3317 -1.4361 -8.8318 14 7 5.6418 -3.5453 -8.9287 15 6 6.4365 -3.7984 -10.1331 16 6 5.8589 -3.1491 -11.3643 17 6 6.6172 -3.0546 -12.5162 18 6 6.0855 -2.4638 -13.6471 19 6 4.7994 -1.9576 -13.6229 20 6 4.0431 -2.0470 -12.4692 21 6 4.5727 -2.6431 -11.3400 22 6 6.8004 -5.2795 -10.3309 23 6 8.0600 -5.0005 -9.4939 24 1 7.9125 -5.1406 -8.4231 25 9 9.2060 -5.6431 -9.9745 26 6 7.9400 -3.5353 -9.9457 27 6 4.2619 -3.1640 -6.4656 28 6 3.6142 -2.9638 -5.2801 29 16 2.9471 0.0114 -2.4715 30 1 -0.3934 0.4417 -0.7651 31 1 1.7923 -0.5138 0.8899 32 1 1.5877 2.4586 -1.2242 33 1 1.5614 2.4679 1.2085 34 1 1.0638 -2.6223 -0.9186 35 1 2.0978 -3.4274 -3.0949 36 1 4.4449 0.2910 -4.7535 37 1 5.6137 -0.0703 -6.8711 38 1 5.0746 -4.2436 -8.5662 39 1 7.6235 -3.4465 -12.5340 40 1 6.6762 -2.3942 -14.5486 41 1 4.3853 -1.4926 -14.5053 42 1 3.0384 -1.6512 -12.4501 43 1 3.9817 -2.7134 -10.4388 44 1 7.0140 -5.5420 -11.3670 45 1 6.1029 -5.9680 -9.8539 46 1 8.1625 -2.8158 -9.1576 47 1 8.4651 -3.3211 -10.8765 48 1 4.2128 -4.1271 -6.9518 49 1 3.0527 -3.7686 -4.8289 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:12 Heat of formation + Delta-G solvation = 10.549550 kcal Electronic energy + Delta-G solvation = -34804.426256 eV Core-core repulsion = 30091.042817 eV Total energy + Delta-G solvation = -4713.383440 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.114 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -48.56505 -42.10737 -40.76243 -39.66419 -39.11938 -38.39510 -37.51024 -34.69836 -33.39714 -32.35880 -31.88283 -31.68671 -30.49881 -27.48235 -27.21304 -25.98403 -24.75465 -24.06048 -23.65374 -23.35678 -22.53802 -21.85052 -20.41113 -20.35937 -19.34765 -18.70336 -18.59928 -17.74037 -17.36543 -17.04341 -16.77599 -16.63248 -16.39717 -16.27152 -16.16684 -16.04489 -15.81408 -15.64084 -15.52609 -15.22981 -14.97788 -14.64531 -14.53199 -14.35285 -14.27441 -13.98799 -13.87199 -13.84844 -13.68756 -13.65697 -13.42531 -13.23212 -13.16607 -12.61756 -12.57564 -12.38350 -12.29438 -12.18294 -11.92700 -11.76177 -11.58464 -11.50411 -10.96745 -10.90988 -10.69519 -10.30725 -10.29073 -9.79864 -9.62056 -9.59309 -9.10728 -5.14946 -0.96042 0.18160 0.24786 0.31920 0.40801 0.52260 0.68825 1.13496 1.48760 1.50541 1.81537 1.82741 1.92832 2.74293 2.75601 3.08980 3.18904 3.19479 3.31223 3.39794 3.45465 3.53095 3.61656 3.65119 3.70150 3.73215 3.99711 4.07256 4.07588 4.14377 4.20725 4.24460 4.29205 4.40657 4.43989 4.44578 4.50198 4.51874 4.52255 4.61740 4.68537 4.79463 4.86581 4.90522 4.97569 5.01254 5.05090 5.13664 5.14805 5.19480 5.21466 5.31668 5.38367 5.57056 5.62712 5.64678 5.70520 6.08841 6.22387 6.28934 7.08298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.033 4.033 3 Si 0.648 3.352 4 C -0.216 4.216 5 C -0.105 4.105 6 C -0.118 4.118 7 C -0.150 4.150 8 C 0.015 3.985 9 C -0.120 4.120 10 C -0.047 4.047 11 C -0.137 4.137 12 C 0.562 3.438 13 O -0.514 6.514 14 N -0.711 5.711 15 C 0.196 3.804 16 C -0.074 4.074 17 C -0.111 4.111 18 C -0.116 4.116 19 C -0.119 4.119 20 C -0.118 4.118 21 C -0.101 4.101 22 C -0.151 4.151 23 C 0.066 3.934 24 H 0.111 0.889 25 F -0.202 7.202 26 C -0.154 4.154 27 C -0.079 4.079 28 C -0.110 4.110 29 S 0.135 5.865 30 H 0.378 0.622 31 H 0.128 0.872 32 H -0.240 1.240 33 H -0.234 1.234 34 H 0.146 0.854 35 H 0.145 0.855 36 H 0.131 0.869 37 H 0.142 0.858 38 H 0.404 0.596 39 H 0.124 0.876 40 H 0.124 0.876 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.116 0.884 44 H 0.113 0.887 45 H 0.089 0.911 46 H 0.095 0.905 47 H 0.108 0.892 48 H 0.130 0.870 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.440 -2.504 1.233 3.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.145 4.145 3 Si 0.547 3.453 4 C -0.334 4.334 5 C -0.135 4.135 6 C -0.149 4.149 7 C -0.267 4.267 8 C 0.013 3.987 9 C -0.139 4.139 10 C -0.066 4.066 11 C -0.141 4.141 12 C 0.350 3.650 13 O -0.390 6.390 14 N -0.365 5.365 15 C 0.109 3.891 16 C -0.076 4.076 17 C -0.129 4.129 18 C -0.134 4.134 19 C -0.137 4.137 20 C -0.136 4.136 21 C -0.120 4.120 22 C -0.189 4.189 23 C 0.030 3.970 24 H 0.128 0.872 25 F -0.183 7.183 26 C -0.193 4.193 27 C -0.097 4.097 28 C -0.130 4.130 29 S 0.402 5.598 30 H 0.226 0.774 31 H 0.146 0.854 32 H -0.164 1.164 33 H -0.157 1.157 34 H 0.164 0.836 35 H 0.162 0.838 36 H 0.149 0.851 37 H 0.160 0.840 38 H 0.241 0.759 39 H 0.142 0.858 40 H 0.142 0.858 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.134 0.866 44 H 0.131 0.869 45 H 0.108 0.892 46 H 0.113 0.887 47 H 0.127 0.873 48 H 0.148 0.852 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.435 0.143 1.254 1.335 hybrid contribution -2.009 -1.965 -0.120 2.813 sum -2.444 -1.822 1.134 3.252 Atomic orbital electron populations 1.86629 1.17161 1.79909 1.49282 1.24376 0.83847 1.10052 0.96253 0.95225 0.91849 0.75170 0.83069 1.25047 1.07040 0.99032 1.02257 1.20006 1.01242 0.94868 0.97363 1.20390 0.98602 1.00552 0.95330 1.23088 1.05981 0.98084 0.99509 1.18300 0.95120 0.94065 0.91215 1.20982 0.97957 0.98765 0.96157 1.20943 0.95939 0.96199 0.93539 1.19976 1.02268 0.95667 0.96188 1.18201 0.80655 0.82042 0.84114 1.90842 1.41586 1.41551 1.64997 1.45579 1.47769 1.15264 1.27867 1.19621 0.90797 0.95339 0.83332 1.19591 0.94566 0.99580 0.93830 1.20938 0.99561 0.99886 0.92532 1.21140 0.95730 0.98320 0.98228 1.21207 0.94648 0.99572 0.98235 1.21156 1.00017 0.99290 0.93171 1.20878 0.94980 0.97959 0.98137 1.24005 0.97219 0.94547 1.03158 1.23123 0.82024 0.92911 0.98949 0.87169 1.92832 1.52477 1.83168 1.89796 1.24041 0.94127 0.96399 1.04696 1.20955 0.95419 0.98111 0.95249 1.20872 1.00283 0.96385 0.95413 1.84184 1.48587 1.12410 1.14616 0.77394 0.85409 1.16372 1.15699 0.83639 0.83762 0.85119 0.84038 0.75908 0.85835 0.85766 0.85966 0.86067 0.86590 0.86876 0.89200 0.88650 0.87346 0.85244 0.84793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.20 12.86 -35.23 -0.45 -0.65 16 2 C -0.03 0.03 2.96 36.00 0.11 0.14 16 3 Si 0.65 -0.76 30.96 -169.99 -5.26 -6.02 16 4 C -0.22 0.11 5.73 -35.89 -0.21 -0.09 16 5 C -0.10 0.05 10.00 -41.32 -0.41 -0.36 16 6 C -0.12 0.10 9.64 -40.90 -0.39 -0.30 16 7 C -0.15 0.03 6.37 -36.94 -0.24 -0.21 16 8 C 0.02 0.00 5.88 -104.91 -0.62 -0.62 16 9 C -0.12 0.02 9.54 -39.60 -0.38 -0.36 16 10 C -0.05 -0.02 9.53 -39.59 -0.38 -0.40 16 11 C -0.14 0.01 5.88 -104.90 -0.62 -0.60 16 12 C 0.56 0.60 6.66 -12.46 -0.08 0.52 16 13 O -0.51 -2.44 14.72 5.28 0.08 -2.37 16 14 N -0.71 1.06 3.99 -48.94 -0.20 0.87 16 15 C 0.20 -0.09 0.95 -132.15 -0.13 -0.21 16 16 C -0.07 -0.10 4.99 -104.62 -0.52 -0.62 16 17 C -0.11 -0.13 8.72 -39.59 -0.35 -0.47 16 18 C -0.12 -0.13 10.05 -39.58 -0.40 -0.53 16 19 C -0.12 -0.15 10.05 -39.58 -0.40 -0.54 16 20 C -0.12 -0.18 10.05 -39.58 -0.40 -0.58 16 21 C -0.10 -0.17 9.16 -39.58 -0.36 -0.53 16 22 C -0.15 0.30 7.20 -25.91 -0.19 0.11 16 23 C 0.07 -0.04 5.58 -25.91 -0.14 -0.19 16 24 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 25 F -0.20 -0.43 17.41 2.25 0.04 -0.39 16 26 C -0.15 -0.07 6.58 -25.92 -0.17 -0.24 16 27 C -0.08 0.18 9.48 -39.59 -0.38 -0.20 16 28 C -0.11 0.19 9.48 -39.59 -0.38 -0.18 16 29 S 0.13 -0.08 19.46 -107.50 -2.09 -2.17 16 30 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 31 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 32 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 33 H -0.23 -0.36 7.11 56.52 0.40 0.04 16 34 H 0.15 -0.19 8.06 -52.49 -0.42 -0.61 16 35 H 0.14 -0.40 6.88 -52.48 -0.36 -0.76 16 36 H 0.13 -0.16 7.26 -52.48 -0.38 -0.54 16 37 H 0.14 0.09 7.64 -52.48 -0.40 -0.31 16 38 H 0.40 -1.75 6.78 -40.82 -0.28 -2.03 16 39 H 0.12 -0.04 6.53 -52.48 -0.34 -0.38 16 40 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 41 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 42 H 0.12 0.00 8.06 -52.48 -0.42 -0.43 16 43 H 0.12 0.10 6.96 -52.49 -0.37 -0.27 16 44 H 0.11 -0.20 7.79 -51.93 -0.40 -0.60 16 45 H 0.09 -0.34 8.13 -51.93 -0.42 -0.77 16 46 H 0.09 0.19 6.71 -51.93 -0.35 -0.15 16 47 H 0.11 0.05 6.21 -51.93 -0.32 -0.27 16 48 H 0.13 -0.68 6.40 -52.49 -0.34 -1.01 16 49 H 0.13 -0.50 6.74 -52.48 -0.35 -0.85 16 LS Contribution 419.12 15.07 6.32 6.32 Total: 0.00 -8.13 419.12 -14.23 -22.36 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -5.64 Total: -11.47 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -7.01 Total: -6.47 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -0.20 Total: 0.87 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.38 Total: -3.02 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.39 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.26 Total: -6.02 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.09 Total: -2.17 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -8.13 -14.23 -22.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.910 kcal (2) G-P(sol) polarization free energy of solvation -8.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.360 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds