Wall clock time and date at job start Tue Mar 9 2021 13:14:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35993 * 117.00204 * 2 1 4 4 C 1.39157 * 120.07318 * 180.02562 * 3 2 1 5 5 O 1.35993 * 120.07076 * 359.97438 * 4 3 2 6 6 C 1.42897 * 117.00079 * 179.72747 * 5 4 3 7 7 C 1.50696 * 109.47668 * 179.97438 * 6 5 4 8 8 O 1.21280 * 119.99999 * 0.02562 * 7 6 5 9 9 N 1.34779 * 120.00609 * 180.02562 * 7 6 5 10 10 C 1.46493 * 120.00294 * 185.13816 * 9 7 6 11 11 C 1.50696 * 112.85379 * 65.79219 * 10 9 7 12 12 C 1.38237 * 120.00106 * 186.75960 * 11 10 9 13 13 C 1.38233 * 119.99880 * 179.97438 * 12 11 10 14 14 C 1.38232 * 120.00242 * 359.97438 * 13 12 11 15 15 C 1.38238 * 119.99899 * 0.27284 * 14 13 12 16 16 C 1.38231 * 119.99598 * 359.51086 * 15 14 13 17 17 C 1.53785 * 113.68800 * 294.52296 * 10 9 7 18 18 C 1.53783 * 87.08297 * 270.87274 * 17 10 9 19 19 H 1.09005 * 113.61242 * 89.11450 * 18 17 10 20 20 F 1.39895 * 113.61585 * 220.01550 * 18 17 10 21 21 C 1.53781 * 113.61465 * 196.99110 * 10 9 7 22 22 C 1.38564 * 119.85318 * 179.72169 * 4 3 2 23 23 C 1.38239 * 119.99911 * 0.27799 * 22 4 3 24 24 N 1.48003 * 119.92382 * 179.97438 * 23 22 4 25 25 O 1.21801 * 120.00147 * 0.02562 * 24 23 22 26 26 O 1.21809 * 119.99823 * 179.97438 * 24 23 22 27 27 C 1.38249 * 120.14690 * 359.97137 * 23 22 4 28 28 C 1.50705 * 119.92629 * 180.02562 * 27 23 22 29 29 O 1.42907 * 109.46730 * 75.00471 * 28 27 23 30 30 Si 1.86299 * 109.47038 * 195.00464 * 28 27 23 31 31 C 1.38242 * 120.15042 * 0.02741 * 27 23 22 32 32 H 1.09003 * 109.46999 * 59.99931 * 1 2 3 33 33 H 1.08998 * 109.47379 * 180.02562 * 1 2 3 34 34 H 1.09002 * 109.46976 * 300.00112 * 1 2 3 35 35 H 1.09003 * 109.47116 * 59.99628 * 6 5 4 36 36 H 1.09000 * 109.47293 * 300.00145 * 6 5 4 37 37 H 0.97001 * 119.99646 * 5.12811 * 9 7 6 38 38 H 1.08004 * 120.00003 * 359.97438 * 12 11 10 39 39 H 1.08008 * 120.00079 * 179.97438 * 13 12 11 40 40 H 1.08002 * 120.00197 * 179.97438 * 14 13 12 41 41 H 1.08000 * 120.00203 * 179.72508 * 15 14 13 42 42 H 1.08009 * 119.99561 * 180.27548 * 16 15 14 43 43 H 1.08998 * 113.61331 * 25.42552 * 17 10 9 44 44 H 1.09007 * 113.61343 * 156.32591 * 17 10 9 45 45 H 1.08994 * 113.61739 * 203.74699 * 21 10 9 46 46 H 1.08998 * 113.61506 * 334.65065 * 21 10 9 47 47 H 1.08001 * 119.99959 * 180.29844 * 22 4 3 48 48 H 1.08999 * 109.47072 * 315.00773 * 28 27 23 49 49 H 0.96697 * 113.99348 * 179.97438 * 29 28 27 50 50 H 1.48504 * 109.99794 * 178.68486 * 30 28 27 51 51 H 1.48499 * 109.99855 * 299.99789 * 30 28 27 52 52 H 1.07994 * 120.00589 * 179.97438 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3004 -0.0072 7 6 6.2518 -1.0584 -0.0055 8 8 5.5670 -2.0593 0.0003 9 7 7.5957 -1.1615 -0.0104 10 6 8.2289 -2.4778 -0.1225 11 6 7.9722 -3.1395 -1.4518 12 6 8.3815 -4.4425 -1.6657 13 6 8.1455 -5.0497 -2.8849 14 6 7.4998 -4.3542 -3.8900 15 6 7.0951 -3.0495 -3.6778 16 6 7.3271 -2.4438 -2.4571 17 6 7.9651 -3.3950 1.0834 18 6 9.2237 -2.7850 1.7229 19 1 9.0241 -1.8899 2.3120 20 9 10.0160 -3.7176 2.4008 21 6 9.7091 -2.4867 0.2945 22 6 4.0604 2.5232 -0.0064 23 6 3.3031 3.6797 -0.0058 24 7 3.9717 5.0001 -0.0115 25 8 5.1879 5.0669 -0.0171 26 8 3.3057 6.0200 -0.0115 27 6 1.9226 3.6057 -0.0001 28 6 1.1018 4.8696 -0.0001 29 8 1.1296 5.4555 -1.3033 30 14 -0.6574 4.4677 0.4628 31 6 1.2933 2.3748 0.0057 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0276 0.0005 34 1 -0.3633 0.5139 0.8900 35 1 5.9104 0.8528 0.8799 36 1 5.9027 0.8476 -0.9000 37 1 8.1435 -0.3642 0.0600 38 1 8.8855 -4.9861 -0.8803 39 1 8.4656 -6.0676 -3.0523 40 1 7.3158 -4.8284 -4.8427 41 1 6.5946 -2.5046 -4.4646 42 1 7.0070 -1.4260 -2.2898 43 1 7.0453 -3.1589 1.6185 44 1 8.0623 -4.4562 0.8544 45 1 10.2831 -3.2996 -0.1503 46 1 10.1973 -1.5175 0.1927 47 1 5.1387 2.5838 -0.0117 48 1 1.5164 5.5720 0.7229 49 1 0.6206 6.2743 -1.3772 50 1 -1.4700 5.7101 0.4973 51 1 -1.2340 3.5108 -0.5155 52 1 0.2148 2.3196 0.0106 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:40 Heat of formation + Delta-G solvation = -72.763351 kcal Electronic energy + Delta-G solvation = -43255.999330 eV Core-core repulsion = 37494.374667 eV Total energy + Delta-G solvation = -5761.624662 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.151 amu Computer time = 2.21 seconds Orbital eigenvalues (eV) -48.62404 -43.40305 -42.24731 -41.89300 -40.34258 -39.47400 -39.13339 -38.50368 -37.75719 -37.24263 -34.56241 -32.78090 -32.58065 -31.99928 -31.78146 -29.85789 -28.81683 -27.92982 -27.14852 -26.09944 -25.59516 -24.00958 -23.60940 -23.13254 -22.62772 -22.01260 -20.79314 -20.38562 -19.88096 -19.46816 -18.91987 -18.70589 -18.64782 -18.36395 -18.01045 -17.70351 -17.67900 -17.33022 -16.90076 -16.83267 -16.63433 -16.46814 -15.99810 -15.95483 -15.77665 -15.65414 -15.51952 -15.28354 -14.93233 -14.74219 -14.35915 -14.26694 -14.12425 -14.02672 -13.95342 -13.82354 -13.60183 -13.49394 -13.36351 -12.93385 -12.68916 -12.65251 -12.59125 -12.41347 -12.38835 -12.33692 -12.32257 -12.18964 -12.00648 -11.92163 -11.71618 -11.46335 -11.03595 -10.49121 -10.41985 -10.37117 -9.89170 -9.66062 -9.50691 -5.02300 -1.34081 -0.44765 0.17467 0.30120 0.32536 0.42582 1.12794 1.14727 1.36405 1.51014 1.82193 1.85817 1.89555 2.23159 2.69272 2.89338 3.11988 3.15207 3.21409 3.28301 3.38035 3.40609 3.46525 3.59627 3.60883 3.80615 3.82849 3.91853 3.93301 3.98287 4.00898 4.03178 4.11631 4.14493 4.18032 4.20719 4.28305 4.36167 4.48931 4.55087 4.56020 4.59871 4.64613 4.69102 4.69535 4.74181 4.82455 4.96846 4.98986 5.09370 5.26663 5.29419 5.48366 5.53962 5.56001 5.62735 6.01502 6.02180 6.33008 6.50092 6.51511 7.04552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.306 6.306 3 C 0.167 3.833 4 C 0.103 3.897 5 O -0.288 6.288 6 C 0.024 3.976 7 C 0.519 3.481 8 O -0.542 6.542 9 N -0.694 5.694 10 C 0.199 3.801 11 C -0.083 4.083 12 C -0.121 4.121 13 C -0.125 4.125 14 C -0.131 4.131 15 C -0.133 4.133 16 C -0.115 4.115 17 C -0.161 4.161 18 C 0.067 3.933 19 H 0.132 0.868 20 F -0.219 7.219 21 C -0.138 4.138 22 C -0.108 4.108 23 C -0.044 4.044 24 N 0.038 4.962 25 O -0.188 6.188 26 O -0.158 6.158 27 C 0.003 3.997 28 C -0.105 4.105 29 O -0.546 6.546 30 Si 0.768 3.232 31 C -0.173 4.173 32 H 0.069 0.931 33 H 0.124 0.876 34 H 0.090 0.910 35 H 0.134 0.866 36 H 0.126 0.874 37 H 0.427 0.573 38 H 0.135 0.865 39 H 0.140 0.860 40 H 0.136 0.864 41 H 0.130 0.870 42 H 0.118 0.882 43 H 0.075 0.925 44 H 0.099 0.901 45 H 0.112 0.888 46 H 0.119 0.881 47 H 0.188 0.812 48 H 0.102 0.898 49 H 0.400 0.600 50 H -0.278 1.278 51 H -0.270 1.270 52 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.283 0.465 2.036 2.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.217 6.217 3 C 0.119 3.881 4 C 0.056 3.944 5 O -0.201 6.201 6 C -0.054 4.054 7 C 0.305 3.695 8 O -0.417 6.417 9 N -0.351 5.351 10 C 0.112 3.888 11 C -0.084 4.084 12 C -0.140 4.140 13 C -0.143 4.143 14 C -0.149 4.149 15 C -0.151 4.151 16 C -0.133 4.133 17 C -0.200 4.200 18 C 0.031 3.969 19 H 0.150 0.850 20 F -0.200 7.200 21 C -0.176 4.176 22 C -0.128 4.128 23 C -0.129 4.129 24 N 0.552 4.448 25 O -0.398 6.398 26 O -0.375 6.375 27 C 0.001 3.999 28 C -0.212 4.212 29 O -0.357 6.357 30 Si 0.669 3.331 31 C -0.192 4.192 32 H 0.088 0.912 33 H 0.142 0.858 34 H 0.108 0.892 35 H 0.151 0.849 36 H 0.144 0.856 37 H 0.267 0.733 38 H 0.153 0.847 39 H 0.158 0.842 40 H 0.154 0.846 41 H 0.148 0.852 42 H 0.136 0.864 43 H 0.094 0.906 44 H 0.118 0.882 45 H 0.130 0.870 46 H 0.137 0.863 47 H 0.205 0.795 48 H 0.120 0.880 49 H 0.252 0.748 50 H -0.204 1.204 51 H -0.196 1.196 52 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -2.480 -1.789 1.691 3.494 hybrid contribution 0.433 1.818 -1.001 2.120 sum -2.047 0.029 0.690 2.160 Atomic orbital electron populations 1.23726 0.75094 1.06923 1.03576 1.86317 1.24436 1.24592 1.86374 1.18648 0.89350 0.86137 0.94008 1.17890 0.88524 0.85239 1.02736 1.86301 1.18399 1.26657 1.88731 1.22942 0.78882 0.96013 1.07514 1.20253 0.82702 0.90568 0.76008 1.90825 1.63593 1.39393 1.47879 1.45322 1.05420 1.09095 1.75215 1.19581 0.94516 0.83509 0.91212 1.19768 0.99238 0.94773 0.94614 1.21136 1.00601 0.94207 0.98008 1.21423 0.98756 1.00842 0.93311 1.21461 0.98462 0.94805 1.00136 1.21390 1.00186 0.95904 0.97616 1.21016 0.98708 1.00178 0.93409 1.24051 0.98836 1.00915 0.96169 1.23335 0.89726 0.91516 0.92338 0.85004 1.92800 1.76094 1.68505 1.82605 1.23974 0.93345 1.06562 0.93715 1.20908 1.03076 0.87982 1.00832 1.20538 0.92531 0.82299 1.17507 1.43560 1.00829 1.03209 0.97211 1.94512 0.96312 1.94048 1.54890 1.94488 1.64628 1.25265 1.53071 1.19103 0.90411 0.95838 0.94506 1.25389 1.11821 0.94118 0.89846 1.86478 1.75781 1.44938 1.28485 0.94370 0.70670 0.80940 0.87110 1.21156 1.02077 0.88675 1.07300 0.91210 0.85785 0.89192 0.84872 0.85599 0.73342 0.84722 0.84216 0.84618 0.85225 0.86384 0.90632 0.88220 0.86963 0.86270 0.79538 0.88014 0.74835 1.20370 1.19614 0.80136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 -0.59 10.28 -79.61 -0.82 -1.41 16 3 C 0.17 0.18 6.70 22.57 0.15 0.33 16 4 C 0.10 0.11 6.70 22.57 0.15 0.26 16 5 O -0.29 -0.80 9.45 -67.05 -0.63 -1.44 16 6 C 0.02 -0.13 5.22 71.23 0.37 0.24 16 7 C 0.52 -0.22 5.86 87.66 0.51 0.29 16 8 O -0.54 -5.64 14.74 16.01 0.24 -5.40 16 9 N -0.69 4.44 4.44 -423.94 -1.88 2.56 16 10 C 0.20 -0.49 0.95 3.39 0.00 -0.49 16 11 C -0.08 -0.19 4.88 -19.87 -0.10 -0.29 16 12 C -0.12 -0.27 8.45 22.27 0.19 -0.08 16 13 C -0.13 -0.29 10.05 22.27 0.22 -0.07 16 14 C -0.13 -0.39 10.05 22.27 0.22 -0.17 16 15 C -0.13 -0.52 10.05 22.27 0.22 -0.29 16 16 C -0.11 -0.43 8.63 22.27 0.19 -0.24 16 17 C -0.16 -0.06 6.67 31.12 0.21 0.15 16 18 C 0.07 -0.23 5.58 31.12 0.17 -0.05 16 19 H 0.13 -1.03 8.14 -2.38 -0.02 -1.05 16 20 F -0.22 -0.69 17.41 44.97 0.78 0.09 16 21 C -0.14 0.89 7.16 31.12 0.22 1.12 16 22 C -0.11 0.06 8.54 22.35 0.19 0.26 16 23 C -0.04 -0.16 6.84 36.38 0.25 0.09 16 24 N 0.04 0.31 4.45 -46.47 -0.21 0.10 16 25 O -0.19 -1.72 18.44 18.88 0.35 -1.38 16 26 O -0.16 -1.54 14.62 25.09 0.37 -1.17 16 27 C 0.00 0.00 5.29 -19.86 -0.11 -0.10 16 28 C -0.10 0.03 1.73 71.24 0.12 0.16 16 29 O -0.55 -1.46 11.78 -129.64 -1.53 -2.99 16 30 Si 0.77 -4.14 30.19 68.60 2.07 -2.07 16 31 C -0.17 0.29 7.65 22.35 0.17 0.46 16 32 H 0.07 -0.56 7.68 -2.39 -0.02 -0.57 16 33 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 34 H 0.09 -1.01 7.65 -2.39 -0.02 -1.03 16 35 H 0.13 -1.65 7.66 -2.39 -0.02 -1.66 16 36 H 0.13 -1.38 7.66 -2.39 -0.02 -1.40 16 37 H 0.43 -6.15 8.66 -92.71 -0.80 -6.95 16 38 H 0.13 -0.12 6.74 -2.91 -0.02 -0.14 16 39 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 40 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 41 H 0.13 0.13 8.06 -2.91 -0.02 0.11 16 42 H 0.12 0.17 6.20 -2.91 -0.02 0.15 16 43 H 0.07 0.31 7.22 -2.39 -0.02 0.29 16 44 H 0.10 0.16 6.55 -2.38 -0.02 0.14 16 45 H 0.11 -0.61 7.42 -2.39 -0.02 -0.63 16 46 H 0.12 -1.40 8.09 -2.39 -0.02 -1.42 16 47 H 0.19 -1.13 5.85 -2.91 -0.02 -1.14 16 48 H 0.10 -0.05 6.07 -2.39 -0.01 -0.06 16 49 H 0.40 -1.93 8.74 -74.06 -0.65 -2.57 16 50 H -0.28 0.20 7.11 99.48 0.71 0.91 16 51 H -0.27 0.65 6.74 99.48 0.67 1.32 16 52 H 0.18 -1.14 3.13 -2.91 -0.01 -1.15 16 Total: 0.00 -31.59 432.26 2.82 -28.77 By element: Atomic # 1 Polarization: -17.95 SS G_CDS: -0.40 Total: -18.35 kcal Atomic # 6 Polarization: -1.81 SS G_CDS: 4.49 Total: 2.68 kcal Atomic # 7 Polarization: 4.76 SS G_CDS: -2.09 Total: 2.67 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: -2.03 Total: -13.78 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.78 Total: 0.09 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.07 Total: -2.07 kcal Total: -31.59 2.82 -28.77 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.994 kcal (2) G-P(sol) polarization free energy of solvation -31.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.21 seconds