Wall clock time and date at job start Tue Mar 9 2021 13:15:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35975 * 117.00102 * 2 1 4 4 C 1.38679 * 119.99945 * 179.97438 * 3 2 1 5 5 C 1.38156 * 120.00064 * 180.02562 * 4 3 2 6 6 C 1.50696 * 120.00134 * 180.02562 * 5 4 3 7 7 O 1.42899 * 109.47219 * 104.97348 * 6 5 4 8 8 Si 1.86299 * 109.47060 * 344.97530 * 6 5 4 9 9 C 1.38684 * 119.99867 * 359.97438 * 5 4 3 10 10 O 1.35974 * 120.00040 * 180.02562 * 9 5 4 11 11 C 1.42893 * 117.00333 * 180.02562 * 10 9 5 12 12 C 1.50697 * 109.47613 * 179.97438 * 11 10 9 13 13 O 1.21284 * 119.99781 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00289 * 180.02562 * 12 11 10 15 15 C 1.46504 * 120.00066 * 184.77484 * 14 12 11 16 16 C 1.50695 * 112.84709 * 305.02016 * 15 14 12 17 17 C 1.38243 * 120.00014 * 336.05258 * 16 15 14 18 18 C 1.38235 * 119.99761 * 179.78954 * 17 16 15 19 19 C 1.38236 * 120.00340 * 0.43933 * 18 17 16 20 20 C 1.38238 * 119.99703 * 359.81316 * 19 18 17 21 21 C 1.38233 * 120.00275 * 359.97438 * 20 19 18 22 22 C 1.53787 * 113.61420 * 173.82753 * 15 14 12 23 23 C 1.53778 * 87.16945 * 270.75621 * 22 15 14 24 24 H 1.08994 * 113.61816 * 89.15856 * 23 22 15 25 25 F 1.39898 * 113.61281 * 220.06335 * 23 22 15 26 26 C 1.53777 * 113.69162 * 76.28880 * 15 14 12 27 27 C 1.38716 * 119.99994 * 0.27603 * 9 5 4 28 28 C 1.38116 * 119.99723 * 359.45362 * 27 9 5 29 29 H 1.09005 * 109.47209 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46785 * 299.99751 * 1 2 3 31 31 H 1.08997 * 109.47161 * 59.99864 * 1 2 3 32 32 H 1.07994 * 120.00096 * 0.04661 * 4 3 2 33 33 H 1.08999 * 109.47334 * 224.97431 * 6 5 4 34 34 H 0.96706 * 114.00045 * 60.00297 * 7 6 5 35 35 H 1.48501 * 109.99748 * 178.68197 * 8 6 5 36 36 H 1.48502 * 110.00131 * 299.99916 * 8 6 5 37 37 H 1.09000 * 109.47247 * 59.99449 * 11 10 9 38 38 H 1.09004 * 109.47273 * 299.99912 * 11 10 9 39 39 H 0.97004 * 120.00156 * 4.76853 * 14 12 11 40 40 H 1.07997 * 120.00054 * 0.02562 * 17 16 15 41 41 H 1.08005 * 120.00011 * 180.27766 * 18 17 16 42 42 H 1.07990 * 120.00254 * 179.83637 * 19 18 17 43 43 H 1.08000 * 120.00038 * 179.97438 * 20 19 18 44 44 H 1.08001 * 120.00515 * 179.97438 * 21 20 19 45 45 H 1.08996 * 113.61310 * 25.34696 * 22 15 14 46 46 H 1.08996 * 113.60989 * 156.16181 * 22 15 14 47 47 H 1.08999 * 113.61475 * 203.67410 * 26 15 14 48 48 H 1.08999 * 113.61654 * 334.49381 * 26 15 14 49 49 H 1.07994 * 120.00372 * 179.70031 * 27 9 5 50 50 H 1.08003 * 120.00172 * 180.25441 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4312 1.2841 0.0005 5 6 4.0585 2.5150 0.0011 6 6 5.5634 2.5939 0.0011 7 8 6.0209 2.9670 -1.3003 8 14 6.2723 0.9321 0.4556 9 6 3.3032 3.6781 0.0005 10 8 3.9205 4.8897 0.0005 11 6 3.0807 6.0458 0.0005 12 6 3.9348 7.2873 0.0012 13 8 5.1439 7.1915 0.0021 14 7 3.3553 8.5041 0.0018 15 6 4.1817 9.7092 -0.1032 16 6 5.2526 9.7783 0.9548 17 6 5.0953 9.0902 2.1435 18 6 6.0796 9.1501 3.1122 19 6 7.2170 9.9054 2.8962 20 6 7.3719 10.5976 1.7097 21 6 6.3897 10.5342 0.7391 22 6 3.3659 11.0057 -0.2396 23 6 3.4101 10.7833 -1.7606 24 1 2.5839 10.1808 -2.1380 25 9 3.6059 11.9589 -2.4933 26 6 4.7019 9.9797 -1.5248 27 6 1.9179 3.6056 0.0052 28 6 1.2909 2.3750 -0.0009 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 4.0194 0.3784 0.0002 33 1 5.8883 3.3385 0.7277 34 1 5.6903 3.8240 -1.6027 35 1 7.7560 0.9882 0.4282 36 1 5.8041 0.5326 1.8071 37 1 2.4513 6.0377 0.8905 38 1 2.4514 6.0378 -0.8895 39 1 2.3909 8.5819 0.0717 40 1 4.2051 8.5028 2.3137 41 1 5.9588 8.6089 4.0391 42 1 7.9848 9.9543 3.6540 43 1 8.2604 11.1880 1.5410 44 1 6.5105 11.0754 -0.1877 45 1 2.3635 10.9372 0.1828 46 1 3.9031 11.8959 0.0874 47 1 5.6048 10.5898 -1.5506 48 1 4.7794 9.0830 -2.1395 49 1 1.3297 4.5113 0.0097 50 1 0.2124 2.3184 -0.0014 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:08 Heat of formation + Delta-G solvation = -88.351406 kcal Electronic energy + Delta-G solvation = -36441.111654 eV Core-core repulsion = 31509.827478 eV Total energy + Delta-G solvation = -4931.284176 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -48.65117 -42.17473 -41.67905 -40.34433 -39.52753 -38.68478 -37.94403 -36.85313 -34.53108 -32.81230 -32.02812 -31.75902 -31.06023 -29.52728 -28.12219 -27.32964 -26.51775 -25.93197 -23.95996 -23.47234 -22.65688 -22.42224 -21.96711 -20.50430 -19.55732 -18.87170 -18.62862 -18.55453 -17.91413 -17.59472 -17.46848 -17.35295 -16.98254 -16.72290 -16.63371 -16.15453 -16.00482 -15.82433 -15.65834 -15.51262 -15.40736 -15.24797 -15.02587 -14.46625 -14.37003 -14.17213 -14.13879 -13.92391 -13.85497 -13.68955 -13.66303 -13.49429 -13.39347 -13.11168 -12.77876 -12.65086 -12.30124 -12.27780 -11.93427 -11.88466 -11.76935 -11.57215 -11.55328 -11.18379 -11.05316 -10.95757 -10.42856 -10.09989 -9.77929 -9.56143 -8.85270 -4.76017 0.04613 0.31783 0.41289 0.53842 1.21458 1.34046 1.51834 1.77172 2.13077 2.22150 2.36457 2.53186 2.72762 2.98033 3.09778 3.24823 3.32895 3.45272 3.50793 3.57819 3.61164 3.66970 3.74812 3.93049 3.94436 4.04162 4.05792 4.08726 4.09296 4.11046 4.15375 4.21869 4.31079 4.37048 4.41088 4.41514 4.43164 4.51457 4.59782 4.61857 4.62673 4.75559 4.87231 4.99899 5.04364 5.07551 5.13483 5.15657 5.21576 5.37244 5.56480 5.64759 5.66769 5.99905 6.09361 6.16805 6.35383 6.72089 6.94990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.742 3.258 9 C 0.099 3.901 10 O -0.289 6.289 11 C 0.042 3.958 12 C 0.514 3.486 13 O -0.486 6.486 14 N -0.713 5.713 15 C 0.200 3.800 16 C -0.068 4.068 17 C -0.095 4.095 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.116 4.116 21 C -0.111 4.111 22 C -0.151 4.151 23 C 0.067 3.933 24 H 0.111 0.889 25 F -0.201 7.201 26 C -0.161 4.161 27 C -0.165 4.165 28 C -0.165 4.165 29 H 0.103 0.897 30 H 0.055 0.945 31 H 0.056 0.944 32 H 0.147 0.853 33 H 0.078 0.922 34 H 0.368 0.632 35 H -0.254 1.254 36 H -0.251 1.251 37 H 0.092 0.908 38 H 0.095 0.905 39 H 0.406 0.594 40 H 0.111 0.889 41 H 0.120 0.880 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.124 0.876 45 H 0.091 0.909 46 H 0.114 0.886 47 H 0.111 0.889 48 H 0.088 0.912 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.922 0.613 0.653 7.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.059 3.941 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.338 6.338 8 Si 0.641 3.359 9 C 0.054 3.946 10 O -0.202 6.202 11 C -0.037 4.037 12 C 0.299 3.701 13 O -0.357 6.357 14 N -0.368 5.368 15 C 0.113 3.887 16 C -0.069 4.069 17 C -0.113 4.113 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.134 4.134 21 C -0.129 4.129 22 C -0.189 4.189 23 C 0.031 3.969 24 H 0.129 0.871 25 F -0.181 7.181 26 C -0.200 4.200 27 C -0.184 4.184 28 C -0.184 4.184 29 H 0.122 0.878 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.164 0.836 33 H 0.096 0.904 34 H 0.216 0.784 35 H -0.179 1.179 36 H -0.175 1.175 37 H 0.110 0.890 38 H 0.113 0.887 39 H 0.241 0.759 40 H 0.130 0.870 41 H 0.138 0.862 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.142 0.858 45 H 0.109 0.891 46 H 0.132 0.868 47 H 0.129 0.871 48 H 0.107 0.893 49 H 0.150 0.850 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.929 -0.621 1.218 6.085 hybrid contribution -1.555 2.020 0.394 2.579 sum -7.485 1.399 1.612 7.783 Atomic orbital electron populations 1.23104 0.78047 1.04418 1.01318 1.86116 1.21554 1.26159 1.88853 1.18812 0.91908 0.84589 0.98799 1.20064 0.91647 0.96787 1.03594 1.19485 0.96616 0.90019 1.03756 1.25361 0.91468 1.12347 0.88821 1.86713 1.73781 1.41878 1.31441 0.93032 0.79819 0.80250 0.82812 1.18645 0.90811 0.84536 1.00592 1.86110 1.33788 1.11027 1.89299 1.22428 0.93116 0.84151 1.04032 1.20019 0.89076 0.83850 0.77191 1.90849 1.13744 1.86150 1.44973 1.45520 1.10296 1.04163 1.76851 1.19616 0.90681 0.84461 0.93948 1.19362 0.94944 0.98389 0.94217 1.20764 0.98905 0.98415 0.93244 1.21118 0.94190 0.99062 0.99202 1.21194 0.97715 0.97104 0.97548 1.21126 0.98896 0.99574 0.93794 1.20954 0.93299 0.99317 0.99345 1.24005 1.01913 0.97489 0.95488 1.23127 0.99650 0.83708 0.90411 0.87107 1.92841 1.96239 1.49864 1.79202 1.24186 0.98516 1.01664 0.95633 1.21008 0.92803 0.98678 1.05897 1.21085 1.00337 0.91509 1.05478 0.87849 0.92618 0.92533 0.83633 0.90433 0.78421 1.17878 1.17506 0.88970 0.88690 0.75893 0.87048 0.86177 0.85998 0.85790 0.85820 0.89080 0.86760 0.87130 0.89323 0.84952 0.84692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.33 10.50 -19.66 -0.21 -0.54 16 3 C 0.10 0.13 6.68 -39.24 -0.26 -0.13 16 4 C -0.10 -0.17 8.59 -39.45 -0.34 -0.51 16 5 C -0.10 -0.22 5.28 -104.49 -0.55 -0.77 16 6 C -0.07 -0.21 2.33 36.00 0.08 -0.12 16 7 O -0.53 -2.01 12.65 -35.23 -0.45 -2.45 16 8 Si 0.74 1.30 30.17 -169.99 -5.13 -3.83 16 9 C 0.10 0.13 6.62 -39.24 -0.26 -0.13 16 10 O -0.29 -0.42 8.56 -39.57 -0.34 -0.76 16 11 C 0.04 -0.09 5.22 36.00 0.19 0.09 16 12 C 0.51 -0.11 6.67 -10.99 -0.07 -0.18 16 13 O -0.49 -2.22 14.76 -14.36 -0.21 -2.43 16 14 N -0.71 2.11 4.53 -47.92 -0.22 1.89 16 15 C 0.20 -0.26 0.95 -132.16 -0.13 -0.38 16 16 C -0.07 -0.09 4.13 -104.62 -0.43 -0.52 16 17 C -0.10 -0.18 8.14 -39.58 -0.32 -0.50 16 18 C -0.12 -0.25 10.05 -39.58 -0.40 -0.64 16 19 C -0.12 -0.22 10.05 -39.58 -0.40 -0.61 16 20 C -0.12 -0.19 10.05 -39.58 -0.40 -0.58 16 21 C -0.11 -0.16 9.22 -39.58 -0.36 -0.53 16 22 C -0.15 0.42 7.20 -25.92 -0.19 0.24 16 23 C 0.07 -0.13 5.59 -25.83 -0.14 -0.27 16 24 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 25 F -0.20 -0.26 17.41 2.25 0.04 -0.22 16 26 C -0.16 0.13 7.05 -25.83 -0.18 -0.05 16 27 C -0.17 0.11 9.03 -39.45 -0.36 -0.25 16 28 C -0.17 0.06 9.03 -39.45 -0.36 -0.30 16 29 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 30 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 32 H 0.15 0.02 5.13 -52.49 -0.27 -0.25 16 33 H 0.08 0.29 7.82 -51.93 -0.41 -0.11 16 34 H 0.37 0.87 8.60 45.56 0.39 1.27 16 35 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 36 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 37 H 0.09 -0.42 7.65 -51.93 -0.40 -0.82 16 38 H 0.10 -0.45 7.67 -51.93 -0.40 -0.85 16 39 H 0.41 -2.61 8.63 -40.82 -0.35 -2.96 16 40 H 0.11 0.09 6.96 -52.49 -0.37 -0.28 16 41 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 42 H 0.12 0.02 8.06 -52.49 -0.42 -0.41 16 43 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 44 H 0.12 -0.02 5.99 -52.49 -0.31 -0.33 16 45 H 0.09 -0.43 8.10 -51.93 -0.42 -0.85 16 46 H 0.11 -0.25 8.09 -51.93 -0.42 -0.67 16 47 H 0.11 -0.06 5.81 -51.93 -0.30 -0.36 16 48 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 49 H 0.13 -0.48 6.29 -52.49 -0.33 -0.81 16 50 H 0.14 -0.36 6.29 -52.48 -0.33 -0.69 16 LS Contribution 411.45 15.07 6.20 6.20 Total: 0.00 -9.99 411.45 -10.64 -20.62 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -6.44 Total: -13.25 kcal Atomic # 6 Polarization: -1.34 SS G_CDS: -3.89 Total: -5.23 kcal Atomic # 7 Polarization: 2.11 SS G_CDS: -0.22 Total: 1.89 kcal Atomic # 8 Polarization: -4.98 SS G_CDS: -1.20 Total: -6.18 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: 1.30 SS G_CDS: -5.13 Total: -3.83 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.99 -10.64 -20.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.726 kcal (2) G-P(sol) polarization free energy of solvation -9.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds