Wall clock time and date at job start Tue Mar 9 2021 13:23:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42898 * 114.00430 * 2 1 4 4 C 1.53002 * 109.47258 * 180.02562 * 3 2 1 5 5 H 1.08997 * 112.90828 * 316.24825 * 4 3 2 6 6 C 1.53778 * 113.61315 * 87.50035 * 4 3 2 7 7 C 1.53784 * 87.07783 * 139.98003 * 6 4 3 8 8 H 1.09003 * 113.69176 * 89.12616 * 7 6 4 9 9 N 1.46502 * 113.61608 * 220.01575 * 7 6 4 10 10 C 1.34777 * 120.00165 * 252.50194 * 9 7 6 11 11 O 1.21276 * 120.00253 * 359.97438 * 10 9 7 12 12 C 1.50704 * 119.99748 * 179.97438 * 10 9 7 13 13 O 1.42900 * 109.46633 * 179.97438 * 12 10 9 14 14 C 1.35918 * 116.99837 * 180.02562 * 13 12 10 15 15 C 1.38788 * 120.06313 * 180.02562 * 14 13 12 16 16 Br 1.89107 * 120.03289 * 359.97438 * 15 14 13 17 17 C 1.38233 * 119.93242 * 179.72065 * 15 14 13 18 18 C 1.38250 * 120.04414 * 0.50689 * 17 15 14 19 19 C 1.50699 * 119.94218 * 179.76810 * 18 17 15 20 20 O 1.42901 * 109.46830 * 119.72225 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 359.72662 * 19 18 17 22 22 C 1.38278 * 120.11351 * 359.48739 * 18 17 15 23 23 C 1.38146 * 120.07848 * 0.25952 * 22 18 17 24 24 C 1.53780 * 87.08409 * 334.56530 * 7 6 4 25 25 H 1.09005 * 109.46985 * 60.00195 * 1 2 3 26 26 H 1.09003 * 109.47415 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46790 * 300.00597 * 1 2 3 28 28 H 1.09001 * 109.47170 * 59.99907 * 3 2 1 29 29 H 1.08997 * 109.47067 * 300.00109 * 3 2 1 30 30 H 1.08997 * 113.62047 * 25.43733 * 6 4 3 31 31 H 1.08993 * 113.61489 * 254.52715 * 6 4 3 32 32 H 0.97001 * 119.99928 * 72.49363 * 9 7 6 33 33 H 1.09001 * 109.47104 * 60.00074 * 12 10 9 34 34 H 1.09000 * 109.46860 * 299.99587 * 12 10 9 35 35 H 1.08004 * 119.98274 * 180.25301 * 17 15 14 36 36 H 1.08991 * 109.47351 * 239.72373 * 19 18 17 37 37 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 38 38 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 39 39 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 40 40 H 1.08007 * 119.96246 * 180.27812 * 22 18 17 41 41 H 1.07993 * 120.03063 * 180.02562 * 23 22 18 42 42 H 1.09001 * 113.61118 * 139.97652 * 24 7 6 43 43 H 1.08996 * 113.61392 * 270.80196 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 -0.0006 5 1 3.9015 0.4279 0.6934 6 6 4.1441 1.0748 -1.4086 7 6 5.2672 1.9993 -0.9095 8 1 6.1073 1.4666 -0.4639 9 7 5.6859 2.9991 -1.8951 10 6 6.8747 2.8749 -2.5178 11 8 7.5982 1.9359 -2.2618 12 6 7.3051 3.9032 -3.5320 13 8 8.5915 3.5544 -4.0473 14 6 9.1286 4.3850 -4.9796 15 6 10.3749 4.1066 -5.5232 16 35 11.3285 2.5712 -4.9671 17 6 10.9161 4.9500 -6.4753 18 6 10.2214 6.0754 -6.8782 19 6 10.8159 6.9961 -7.9126 20 8 9.9506 7.0586 -9.0481 21 14 12.4821 6.3480 -8.4365 22 6 8.9795 6.3545 -6.3379 23 6 8.4318 5.5122 -5.3898 24 6 4.2605 2.5352 0.1221 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3633 0.5140 0.8900 28 1 1.6887 1.8464 0.8900 29 1 1.6887 1.8463 -0.8900 30 1 3.5257 1.5205 -2.1876 31 1 4.4847 0.0705 -1.6600 32 1 5.1074 3.7503 -2.0997 33 1 7.3578 4.8826 -3.0566 34 1 6.5826 3.9335 -4.3476 35 1 11.8841 4.7320 -6.9019 36 1 10.9310 7.9934 -7.4881 37 1 9.8027 6.2048 -9.4774 38 1 13.0793 7.2476 -9.4561 39 1 13.3814 6.2481 -7.2589 40 1 8.4370 7.2320 -6.6577 41 1 7.4616 5.7307 -4.9687 42 1 4.6951 2.7096 1.1064 43 1 3.6748 3.3809 -0.2380 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:41 Heat of formation + Delta-G solvation = -85.224435 kcal Electronic energy + Delta-G solvation = -26307.517780 eV Core-core repulsion = 22174.447353 eV Total energy + Delta-G solvation = -4133.070426 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.061 amu Computer time = 1.92 seconds Orbital eigenvalues (eV) -41.73339 -41.08350 -39.89241 -39.01999 -38.16768 -37.20009 -34.75661 -33.48766 -32.15225 -30.68552 -30.04061 -29.00294 -26.94088 -26.62627 -26.31462 -24.30225 -23.29469 -22.36698 -21.69755 -20.64351 -19.56008 -18.50107 -18.09851 -17.66828 -17.50109 -17.29201 -16.93976 -16.80004 -16.47168 -16.05379 -15.94110 -15.76830 -15.66173 -15.51618 -14.96843 -14.78390 -14.29753 -14.13227 -14.06597 -13.77885 -13.45070 -13.40550 -13.20843 -12.97967 -12.46107 -12.37846 -12.24357 -12.19228 -12.07350 -11.86700 -11.85661 -11.66196 -11.41280 -11.20395 -10.96689 -10.58818 -10.46418 -10.12000 -9.99839 -9.31150 -5.03378 -0.03402 0.08228 0.63754 1.28716 1.41667 1.43585 1.59127 1.92827 2.40152 2.49895 2.83187 3.42966 3.49086 3.50393 3.56155 3.60943 3.78338 3.79314 3.84158 3.90095 4.02832 4.07770 4.09101 4.31483 4.34721 4.39033 4.46457 4.48938 4.53789 4.60237 4.62735 4.71145 4.77432 4.78944 4.82122 4.85813 5.00431 5.03744 5.06069 5.22693 5.30098 5.45646 5.54081 6.05727 6.25029 6.46097 6.77409 7.14213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.421 6.421 3 C 0.070 3.930 4 C -0.109 4.109 5 H 0.089 0.911 6 C -0.143 4.143 7 C 0.118 3.882 8 H 0.091 0.909 9 N -0.698 5.698 10 C 0.511 3.489 11 O -0.570 6.570 12 C 0.034 3.966 13 O -0.305 6.305 14 C 0.149 3.851 15 C -0.140 4.140 16 Br -0.050 7.050 17 C -0.056 4.056 18 C -0.151 4.151 19 C -0.052 4.052 20 O -0.550 6.550 21 Si 0.744 3.256 22 C -0.033 4.033 23 C -0.194 4.194 24 C -0.117 4.117 25 H 0.051 0.949 26 H 0.088 0.912 27 H 0.050 0.950 28 H 0.061 0.939 29 H 0.064 0.936 30 H 0.099 0.901 31 H 0.053 0.947 32 H 0.422 0.578 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.146 0.854 36 H 0.119 0.881 37 H 0.396 0.604 38 H -0.292 1.292 39 H -0.289 1.289 40 H 0.156 0.844 41 H 0.173 0.827 42 H 0.085 0.915 43 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.262 5.662 -0.894 10.056 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.341 6.341 3 C -0.006 4.006 4 C -0.128 4.128 5 H 0.108 0.892 6 C -0.181 4.181 7 C 0.013 3.987 8 H 0.110 0.890 9 N -0.352 5.352 10 C 0.297 3.703 11 O -0.448 6.448 12 C -0.044 4.044 13 O -0.217 6.217 14 C 0.101 3.899 15 C -0.220 4.220 16 Br 0.035 6.965 17 C -0.075 4.075 18 C -0.153 4.153 19 C -0.164 4.164 20 O -0.358 6.358 21 Si 0.651 3.349 22 C -0.051 4.051 23 C -0.213 4.213 24 C -0.155 4.155 25 H 0.069 0.931 26 H 0.107 0.893 27 H 0.068 0.932 28 H 0.079 0.921 29 H 0.082 0.918 30 H 0.117 0.883 31 H 0.072 0.928 32 H 0.261 0.739 33 H 0.148 0.852 34 H 0.148 0.852 35 H 0.163 0.837 36 H 0.136 0.864 37 H 0.246 0.754 38 H -0.220 1.220 39 H -0.216 1.216 40 H 0.174 0.826 41 H 0.191 0.809 42 H 0.103 0.897 43 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -6.350 4.841 -0.307 7.991 hybrid contribution -0.688 0.817 0.327 1.117 sum -7.038 5.658 0.020 9.030 Atomic orbital electron populations 1.22884 0.79766 1.03515 1.00869 1.87863 1.21177 1.29430 1.95610 1.22636 0.92447 0.84252 1.01299 1.22305 0.93451 0.99131 0.97937 0.89229 1.23535 0.97274 0.99904 0.97428 1.22455 0.95804 0.90479 0.89912 0.89048 1.45655 1.18876 1.28959 1.41705 1.20580 0.81683 0.86132 0.81864 1.90787 1.54460 1.34694 1.64857 1.22848 0.84719 0.98760 0.98057 1.86248 1.34051 1.48141 1.53286 1.18817 0.91666 0.90316 0.89100 1.21140 0.96373 0.98796 1.05720 1.96776 1.73556 1.35606 1.90586 1.20920 0.99521 0.92692 0.94351 1.20302 0.96981 0.96594 1.01401 1.24816 1.03254 1.01783 0.86525 1.86474 1.68954 1.37662 1.42712 0.93976 0.74197 0.87218 0.79516 1.21206 0.93458 0.98440 0.92033 1.21610 1.02853 0.94614 1.02243 1.23298 0.95774 0.96919 0.99554 0.93072 0.89325 0.93154 0.92053 0.91771 0.88252 0.92795 0.73914 0.85250 0.85161 0.83693 0.86408 0.75384 1.21986 1.21636 0.82618 0.80932 0.89669 0.86628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 11.01 113.37 1.25 1.19 16 2 O -0.42 -1.38 10.70 -148.98 -1.59 -2.97 16 3 C 0.07 -0.20 5.78 71.98 0.42 0.22 16 4 C -0.11 0.30 4.01 -10.27 -0.04 0.26 16 5 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 6 C -0.14 0.22 7.43 31.12 0.23 0.45 16 7 C 0.12 -0.25 4.24 45.52 0.19 -0.05 16 8 H 0.09 0.37 7.46 -2.39 -0.02 0.36 16 9 N -0.70 3.72 5.35 -440.03 -2.36 1.36 16 10 C 0.51 0.96 7.91 87.66 0.69 1.65 16 11 O -0.57 -8.20 16.10 16.02 0.26 -7.95 16 12 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 13 O -0.30 -1.42 9.00 -73.59 -0.66 -2.08 16 14 C 0.15 0.31 6.68 22.52 0.15 0.47 16 15 C -0.14 -0.64 6.24 22.40 0.14 -0.51 16 16 Br -0.05 -0.42 33.16 -20.37 -0.68 -1.10 16 17 C -0.06 -0.04 8.40 22.27 0.19 0.14 16 18 C -0.15 0.33 5.39 -19.85 -0.11 0.22 16 19 C -0.05 0.16 2.82 71.24 0.20 0.36 16 20 O -0.55 1.71 12.77 -148.98 -1.90 -0.19 16 21 Si 0.74 -1.28 29.78 68.60 2.04 0.76 16 22 C -0.03 0.15 9.60 22.26 0.21 0.36 16 23 C -0.19 0.91 9.04 22.36 0.20 1.12 16 24 C -0.12 0.85 7.39 31.12 0.23 1.08 16 25 H 0.05 -0.22 8.14 -2.38 -0.02 -0.24 16 26 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 27 H 0.05 -0.21 8.14 -2.38 -0.02 -0.22 16 28 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 29 H 0.06 -0.37 7.84 -2.39 -0.02 -0.39 16 30 H 0.10 -0.43 7.89 -2.39 -0.02 -0.45 16 31 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 32 H 0.42 -5.81 8.73 -92.71 -0.81 -6.62 16 33 H 0.13 -1.52 7.66 -2.39 -0.02 -1.54 16 34 H 0.13 -1.54 7.66 -2.39 -0.02 -1.56 16 35 H 0.15 -0.16 4.87 -2.91 -0.01 -0.18 16 36 H 0.12 -0.36 7.96 -2.39 -0.02 -0.38 16 37 H 0.40 -4.13 8.70 -74.05 -0.64 -4.77 16 38 H -0.29 -1.54 7.11 99.48 0.71 -0.83 16 39 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 40 H 0.16 -1.24 8.06 -2.91 -0.02 -1.26 16 41 H 0.17 -2.12 6.30 -2.91 -0.02 -2.14 16 42 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 43 H 0.12 -1.41 8.08 -2.39 -0.02 -1.43 16 Total: 0.00 -27.27 380.46 -0.92 -28.19 By element: Atomic # 1 Polarization: -22.83 SS G_CDS: -0.36 Total: -23.19 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: 4.33 Total: 7.17 kcal Atomic # 7 Polarization: 3.72 SS G_CDS: -2.36 Total: 1.36 kcal Atomic # 8 Polarization: -9.30 SS G_CDS: -3.90 Total: -13.20 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: 2.04 Total: 0.76 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -0.68 Total: -1.10 kcal Total: -27.27 -0.92 -28.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.030 kcal (2) G-P(sol) polarization free energy of solvation -27.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.922 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.92 seconds