Wall clock time and date at job start Tue Mar 9 2021 13:30:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81405 * 1 3 3 O 1.42103 * 108.57918 * 2 1 4 4 O 1.42100 * 108.57809 * 228.97120 * 2 1 3 5 5 C 1.81400 * 101.91994 * 114.48502 * 2 1 3 6 6 H 1.09001 * 112.84766 * 311.19390 * 5 2 1 7 7 C 1.54051 * 113.69721 * 82.46764 * 5 2 1 8 8 C 1.53785 * 86.98596 * 139.98919 * 7 5 2 9 9 H 1.08998 * 113.61497 * 219.98199 * 8 7 5 10 10 N 1.46496 * 113.61497 * 89.15846 * 8 7 5 11 11 C 1.34779 * 119.99914 * 105.86478 * 10 8 7 12 12 O 1.21284 * 119.99695 * 0.02562 * 11 10 8 13 13 C 1.50696 * 120.00395 * 180.02562 * 11 10 8 14 14 C 1.52997 * 109.47242 * 180.02562 * 13 11 10 15 15 C 1.53006 * 109.47127 * 180.02562 * 14 13 11 16 16 O 1.42895 * 109.47036 * 180.02562 * 15 14 13 17 17 C 1.35901 * 117.00221 * 180.02562 * 16 15 14 18 18 C 1.38705 * 120.06062 * 179.97438 * 17 16 15 19 19 C 1.38165 * 119.94474 * 179.97438 * 18 17 16 20 20 C 1.50710 * 119.97241 * 180.02562 * 19 18 17 21 21 O 1.42900 * 109.46783 * 299.99946 * 20 19 18 22 22 Si 1.86295 * 109.46992 * 180.02562 * 20 19 18 23 23 C 1.38248 * 120.05851 * 359.97438 * 19 18 17 24 24 C 1.38288 * 120.10611 * 0.02562 * 23 19 18 25 25 C 1.38118 * 120.05741 * 359.67970 * 24 23 19 26 26 C 1.53780 * 87.17163 * 334.57326 * 8 7 5 27 27 H 1.08995 * 109.47074 * 305.51619 * 1 2 3 28 28 H 1.08997 * 109.47114 * 65.51675 * 1 2 3 29 29 H 1.08998 * 109.46612 * 185.51372 * 1 2 3 30 30 H 1.08996 * 113.61346 * 25.48568 * 7 5 2 31 31 H 1.09003 * 113.69581 * 254.50373 * 7 5 2 32 32 H 0.96994 * 120.00700 * 285.86593 * 10 8 7 33 33 H 1.08996 * 109.47390 * 60.00019 * 13 11 10 34 34 H 1.09001 * 109.46948 * 299.99661 * 13 11 10 35 35 H 1.09001 * 109.47502 * 60.00161 * 14 13 11 36 36 H 1.09001 * 109.47289 * 299.99957 * 14 13 11 37 37 H 1.09001 * 109.47002 * 299.99574 * 15 14 13 38 38 H 1.08993 * 109.46955 * 60.00011 * 15 14 13 39 39 H 1.08001 * 120.02664 * 359.97316 * 18 17 16 40 40 H 1.09000 * 109.47100 * 59.99605 * 20 19 18 41 41 H 0.96698 * 113.99541 * 179.97438 * 21 20 19 42 42 H 1.48498 * 110.00046 * 298.67855 * 22 20 19 43 43 H 1.48502 * 110.00279 * 59.99929 * 22 20 19 44 44 H 1.07995 * 119.94296 * 179.97438 * 23 19 18 45 45 H 1.08001 * 119.96691 * 179.97438 * 24 23 19 46 46 H 1.08004 * 120.02586 * 180.31846 * 25 24 23 47 47 H 1.09006 * 113.61877 * 140.02571 * 26 8 7 48 48 H 1.09001 * 113.61655 * 270.83947 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2668 -0.8842 -1.0161 5 6 2.1887 -0.7356 1.6153 6 1 1.6288 -0.2760 2.4298 7 6 2.1357 -2.2752 1.6217 8 6 3.3793 -2.2333 2.5254 9 1 4.1160 -3.0014 2.2902 10 7 3.0643 -2.1659 3.9545 11 6 3.2303 -3.2533 4.7332 12 8 3.6411 -4.2876 4.2509 13 6 2.9058 -3.1843 6.2032 14 6 3.1812 -4.5428 6.8507 15 6 2.8510 -4.4728 8.3431 16 8 3.1088 -5.7415 8.9480 17 6 2.8653 -5.8507 10.2805 18 6 3.0930 -7.0538 10.9322 19 6 2.8450 -7.1619 12.2871 20 6 3.0928 -8.4687 12.9959 21 8 2.2788 -9.4884 12.4131 22 14 2.6637 -8.2877 14.7997 23 6 2.3709 -6.0722 12.9934 24 6 2.1431 -4.8716 12.3460 25 6 2.3951 -4.7567 10.9929 26 6 3.6946 -0.8648 1.8990 27 1 -0.3633 0.5970 0.8364 28 1 -0.3633 0.4259 -0.9352 29 1 -0.3632 -1.0229 0.0987 30 1 2.3205 -2.7225 0.6451 31 1 1.2518 -2.6810 2.1139 32 1 2.7361 -1.3387 4.3404 33 1 1.8545 -2.9267 6.3315 34 1 3.5266 -2.4239 6.6770 35 1 4.2326 -4.8000 6.7226 36 1 2.5607 -5.3036 6.3770 37 1 3.4712 -3.7120 8.8171 38 1 1.7995 -4.2159 8.4709 39 1 3.4637 -7.9053 10.3809 40 1 4.1434 -8.7419 12.8975 41 1 2.3870 -10.3586 12.8205 42 1 3.5249 -7.2522 15.4252 43 1 1.2336 -7.9156 14.9469 44 1 2.1773 -6.1589 14.0524 45 1 1.7722 -4.0219 12.8999 46 1 2.2219 -3.8173 10.4888 47 1 4.0685 -0.1326 2.6147 48 1 4.3061 -0.9270 0.9988 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12912156_4549616.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:03 Heat of formation + Delta-G solvation = -115.784410 kcal Electronic energy + Delta-G solvation = -29731.485710 eV Core-core repulsion = 25268.076782 eV Total energy + Delta-G solvation = -4463.408928 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 2.57 seconds Orbital eigenvalues (eV) -41.51243 -41.22856 -39.62042 -39.06025 -38.04540 -37.34231 -37.09578 -35.01262 -34.45004 -32.59338 -31.30645 -30.75262 -28.79353 -27.18083 -27.01820 -26.52323 -23.80352 -23.60955 -21.87737 -21.65408 -21.19243 -19.85739 -18.99198 -18.68602 -18.41731 -17.92961 -17.58017 -17.42093 -17.31727 -17.23435 -16.98777 -16.91453 -16.42157 -15.89918 -15.71312 -15.40670 -14.97168 -14.80522 -14.59433 -14.55842 -14.34514 -14.29378 -14.20733 -14.01804 -13.93268 -13.88227 -13.50074 -13.34698 -13.25425 -13.15491 -13.04841 -12.62400 -12.51958 -12.33478 -12.26525 -12.22443 -12.04738 -12.03816 -11.74590 -11.70989 -11.28296 -11.02901 -10.41845 -10.31844 -9.87374 -9.24636 -4.98028 -1.13744 0.19837 0.39449 1.25234 1.44661 1.56696 1.62997 1.72785 1.96299 2.21353 2.36998 2.62437 2.63638 2.94996 3.16281 3.31329 3.35556 3.44172 3.52680 3.69636 3.70545 3.71011 3.79225 3.83441 3.85501 3.95462 4.03598 4.09307 4.16826 4.20560 4.22331 4.26435 4.27275 4.31174 4.37198 4.50164 4.50530 4.53877 4.57775 4.61402 4.73233 4.88051 4.96340 5.07900 5.24015 5.28434 5.33889 5.43558 5.66241 6.24479 6.38978 6.60767 7.03411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.424 3.576 3 O -0.937 6.937 4 O -0.933 6.933 5 C -0.611 4.611 6 H 0.150 0.850 7 C -0.126 4.126 8 C 0.132 3.868 9 H 0.115 0.885 10 N -0.717 5.717 11 C 0.517 3.483 12 O -0.528 6.528 13 C -0.138 4.138 14 C -0.106 4.106 15 C 0.059 3.941 16 O -0.310 6.310 17 C 0.134 3.866 18 C -0.122 4.122 19 C -0.036 4.036 20 C -0.074 4.074 21 O -0.544 6.544 22 Si 0.688 3.312 23 C -0.164 4.164 24 C -0.072 4.072 25 C -0.206 4.206 26 C -0.113 4.113 27 H 0.128 0.872 28 H 0.130 0.870 29 H 0.129 0.871 30 H 0.117 0.883 31 H 0.090 0.910 32 H 0.403 0.597 33 H 0.099 0.901 34 H 0.100 0.900 35 H 0.085 0.915 36 H 0.084 0.916 37 H 0.064 0.936 38 H 0.064 0.936 39 H 0.136 0.864 40 H 0.077 0.923 41 H 0.383 0.617 42 H -0.255 1.255 43 H -0.251 1.251 44 H 0.119 0.881 45 H 0.130 0.870 46 H 0.131 0.869 47 H 0.095 0.905 48 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.454 1.264 5.152 5.845 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.606 3.394 3 O -0.935 6.935 4 O -0.930 6.930 5 C -0.719 4.719 6 H 0.168 0.832 7 C -0.165 4.165 8 C 0.025 3.975 9 H 0.133 0.867 10 N -0.369 5.369 11 C 0.304 3.696 12 O -0.403 6.403 13 C -0.178 4.178 14 C -0.143 4.143 15 C -0.016 4.016 16 O -0.223 6.223 17 C 0.089 3.911 18 C -0.140 4.140 19 C -0.036 4.036 20 C -0.185 4.185 21 O -0.351 6.351 22 Si 0.589 3.411 23 C -0.181 4.181 24 C -0.090 4.090 25 C -0.224 4.224 26 C -0.152 4.152 27 H 0.146 0.854 28 H 0.149 0.851 29 H 0.148 0.852 30 H 0.135 0.865 31 H 0.109 0.891 32 H 0.237 0.763 33 H 0.117 0.883 34 H 0.118 0.882 35 H 0.103 0.897 36 H 0.103 0.897 37 H 0.082 0.918 38 H 0.082 0.918 39 H 0.154 0.846 40 H 0.095 0.905 41 H 0.231 0.769 42 H -0.180 1.180 43 H -0.175 1.175 44 H 0.137 0.863 45 H 0.148 0.852 46 H 0.149 0.851 47 H 0.114 0.886 48 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.984 1.714 4.256 4.998 hybrid contribution -0.904 0.942 0.364 1.355 sum -2.888 2.656 4.619 6.060 Atomic orbital electron populations 1.30235 1.26558 1.11689 1.11927 1.07805 0.78527 0.75623 0.77471 1.93618 1.79126 1.34275 1.86435 1.93622 1.79156 1.67091 1.53113 1.31850 1.07326 1.09107 1.23649 0.83158 1.23305 1.00920 0.89391 1.02932 1.21681 0.97386 0.98242 0.80190 0.86692 1.45677 1.68411 1.14505 1.08279 1.20618 0.77065 0.83216 0.88689 1.90773 1.44314 1.29748 1.75436 1.21531 1.04296 0.99845 0.92088 1.21235 1.04791 0.96581 0.91738 1.22823 1.00779 0.84247 0.93765 1.86082 1.82117 1.34834 1.19309 1.18990 0.95155 0.94147 0.82841 1.20245 1.04162 0.96184 0.93440 1.19138 0.97716 0.93455 0.93278 1.24737 0.97585 0.87917 1.08216 1.86499 1.65502 1.20615 1.62451 0.95337 0.80928 0.88278 0.76520 1.20775 1.04094 0.94019 0.99245 1.20849 0.97151 0.97180 0.93812 1.21286 1.06860 0.98680 0.95620 1.22992 0.90789 0.98279 1.03156 0.85365 0.85116 0.85195 0.86523 0.89133 0.76282 0.88280 0.88215 0.89681 0.89705 0.91750 0.91767 0.84568 0.90481 0.76909 1.17986 1.17524 0.86324 0.85240 0.85107 0.88611 0.87218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 2.93 10.62 101.05 1.07 4.01 16 2 S 2.42 -4.33 5.35 -107.50 -0.57 -4.90 16 3 O -0.94 -2.24 18.10 -57.83 -1.05 -3.29 16 4 O -0.93 -1.88 17.20 -57.83 -0.99 -2.88 16 5 C -0.61 2.62 4.06 -25.78 -0.10 2.52 16 6 H 0.15 -1.08 8.14 -51.93 -0.42 -1.50 16 7 C -0.13 0.40 7.44 -25.77 -0.19 0.21 16 8 C 0.13 -0.29 4.30 -67.12 -0.29 -0.58 16 9 H 0.12 -0.05 7.50 -51.93 -0.39 -0.44 16 10 N -0.72 2.25 5.26 -53.02 -0.28 1.97 16 11 C 0.52 -0.33 7.83 -10.99 -0.09 -0.42 16 12 O -0.53 -2.13 15.60 5.55 0.09 -2.05 16 13 C -0.14 0.49 5.70 -27.89 -0.16 0.33 16 14 C -0.11 0.09 4.87 -26.73 -0.13 -0.04 16 15 C 0.06 -0.06 4.74 37.16 0.18 0.12 16 16 O -0.31 -0.84 10.14 -19.43 -0.20 -1.04 16 17 C 0.13 0.41 6.69 -39.22 -0.26 0.14 16 18 C -0.12 -0.43 9.55 -39.44 -0.38 -0.81 16 19 C -0.04 -0.11 5.42 -104.64 -0.57 -0.68 16 20 C -0.07 -0.04 2.81 36.01 0.10 0.07 16 21 O -0.54 -0.40 12.74 -35.23 -0.45 -0.85 16 22 Si 0.69 -0.58 29.79 -169.99 -5.06 -5.65 16 23 C -0.16 -0.44 8.67 -39.56 -0.34 -0.79 16 24 C -0.07 -0.11 10.04 -39.61 -0.40 -0.51 16 25 C -0.21 -0.29 9.04 -39.43 -0.36 -0.65 16 26 C -0.11 0.37 7.41 -25.92 -0.19 0.18 16 27 H 0.13 -0.80 8.14 -51.93 -0.42 -1.22 16 28 H 0.13 -0.56 8.14 -51.93 -0.42 -0.98 16 29 H 0.13 -0.77 8.14 -51.93 -0.42 -1.19 16 30 H 0.12 -0.33 7.38 -51.93 -0.38 -0.71 16 31 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 32 H 0.40 -2.46 8.70 -40.82 -0.36 -2.81 16 33 H 0.10 -0.55 8.14 -51.93 -0.42 -0.98 16 34 H 0.10 -0.54 8.14 -51.93 -0.42 -0.97 16 35 H 0.08 0.06 8.10 -51.93 -0.42 -0.36 16 36 H 0.08 0.06 8.10 -51.93 -0.42 -0.36 16 37 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 38 H 0.06 -0.14 7.68 -51.93 -0.40 -0.54 16 39 H 0.14 0.44 8.06 -52.49 -0.42 0.01 16 40 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 41 H 0.38 -1.71 8.74 45.56 0.40 -1.32 16 42 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 43 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 44 H 0.12 0.24 4.87 -52.49 -0.26 -0.02 16 45 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 46 H 0.13 -0.15 6.30 -52.48 -0.33 -0.48 16 47 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 48 H 0.11 -0.34 8.10 -51.93 -0.42 -0.76 16 LS Contribution 409.90 15.07 6.18 6.18 Total: 0.00 -15.73 409.90 -11.66 -27.39 By element: Atomic # 1 Polarization: -10.77 SS G_CDS: -7.21 Total: -17.98 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: -2.10 Total: 3.10 kcal Atomic # 7 Polarization: 2.25 SS G_CDS: -0.28 Total: 1.97 kcal Atomic # 8 Polarization: -7.50 SS G_CDS: -2.60 Total: -10.10 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.06 Total: -5.65 kcal Atomic # 16 Polarization: -4.33 SS G_CDS: -0.57 Total: -4.90 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -15.73 -11.66 -27.39 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12912156_4549616.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.396 kcal (2) G-P(sol) polarization free energy of solvation -15.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.657 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.784 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.57 seconds