Wall clock time and date at job start Tue Mar 9 2021 13:30:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81404 * 1 3 3 O 1.42099 * 108.57684 * 2 1 4 4 O 1.42099 * 108.58042 * 228.97649 * 2 1 3 5 5 C 1.81397 * 101.92201 * 114.48563 * 2 1 3 6 6 H 1.08997 * 112.85048 * 311.20326 * 5 2 1 7 7 C 1.53962 * 113.73937 * 82.40432 * 5 2 1 8 8 C 1.53786 * 87.01719 * 139.94614 * 7 5 2 9 9 H 1.09002 * 113.61357 * 220.04719 * 8 7 5 10 10 N 1.46497 * 113.61643 * 89.22773 * 8 7 5 11 11 C 1.34780 * 119.99653 * 105.85894 * 10 8 7 12 12 O 1.21609 * 120.00567 * 0.02562 * 11 10 8 13 13 C 1.47383 * 119.99405 * 179.97438 * 11 10 8 14 14 C 1.36428 * 127.18612 * 180.02562 * 13 11 10 15 15 C 1.50693 * 125.80108 * 0.02562 * 14 13 11 16 16 O 1.42906 * 109.47028 * 90.00387 * 15 14 13 17 17 C 1.35892 * 117.00198 * 179.97438 * 16 15 14 18 18 C 1.38731 * 120.05650 * 359.72149 * 17 16 15 19 19 C 1.38151 * 119.94564 * 179.74152 * 18 17 16 20 20 C 1.38264 * 120.05301 * 0.51702 * 19 18 17 21 21 C 1.50700 * 119.94447 * 179.74280 * 20 19 18 22 22 O 1.42893 * 109.47288 * 245.01890 * 21 20 19 23 23 Si 1.86300 * 109.47018 * 5.01854 * 21 20 19 24 24 C 1.38266 * 120.11394 * 359.75491 * 20 19 18 25 25 C 1.38146 * 120.05468 * 359.97438 * 24 20 19 26 26 O 1.33653 * 108.39370 * 180.02562 * 14 13 11 27 27 C 1.34224 * 110.90908 * 0.02562 * 26 14 13 28 28 C 1.34174 * 109.12417 * 359.70767 * 27 26 14 29 29 C 1.53781 * 87.17350 * 334.63802 * 8 7 5 30 30 H 1.08997 * 109.47343 * 305.51337 * 1 2 3 31 31 H 1.08997 * 109.46786 * 65.51537 * 1 2 3 32 32 H 1.09000 * 109.46915 * 185.50916 * 1 2 3 33 33 H 1.08993 * 113.61598 * 25.42596 * 7 5 2 34 34 H 1.09000 * 113.66569 * 254.46951 * 7 5 2 35 35 H 0.96995 * 120.00146 * 285.86755 * 10 8 7 36 36 H 1.09000 * 109.47027 * 209.99692 * 15 14 13 37 37 H 1.09000 * 109.47643 * 330.00231 * 15 14 13 38 38 H 1.08002 * 120.02540 * 359.97438 * 18 17 16 39 39 H 1.08002 * 119.97062 * 180.22672 * 19 18 17 40 40 H 1.08998 * 109.47314 * 125.01277 * 21 20 19 41 41 H 0.96701 * 114.00205 * 59.99579 * 22 21 20 42 42 H 1.48496 * 110.00180 * 58.67804 * 23 21 20 43 43 H 1.48501 * 109.99938 * 180.02562 * 23 21 20 44 44 H 1.07997 * 119.97715 * 179.97438 * 24 20 19 45 45 H 1.08003 * 120.02914 * 179.97438 * 25 24 20 46 46 H 1.07994 * 125.43515 * 180.02562 * 27 26 14 47 47 H 1.07996 * 127.02514 * 180.27123 * 28 27 26 48 48 H 1.09001 * 113.61695 * 139.93969 * 29 8 7 49 49 H 1.08996 * 113.61580 * 270.76247 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2668 -0.8841 -1.0162 5 6 2.1888 -0.7356 1.6152 6 1 1.6288 -0.2762 2.4297 7 6 2.1345 -2.2743 1.6231 8 6 3.3793 -2.2334 2.5253 9 1 4.1154 -3.0018 2.2888 10 7 3.0662 -2.1664 3.9548 11 6 3.2326 -3.2543 4.7328 12 8 3.6432 -4.2914 4.2483 13 6 2.9181 -3.1866 6.1711 14 6 3.0315 -4.1904 7.0881 15 6 3.5096 -5.5915 6.8068 16 8 4.9271 -5.6543 6.9774 17 6 5.5219 -6.8568 6.7608 18 6 4.7564 -7.9552 6.3971 19 6 5.3642 -9.1753 6.1722 20 6 6.7328 -9.3048 6.3197 21 6 7.3925 -10.6382 6.0794 22 8 7.9534 -11.1195 7.3024 23 14 6.1261 -11.8542 5.4562 24 6 7.4973 -8.2129 6.6876 25 6 6.8950 -6.9894 6.9082 26 8 2.6463 -3.7198 8.2783 27 6 2.2778 -2.4323 8.1879 28 6 2.4213 -2.0221 6.9185 29 6 3.6947 -0.8648 1.8989 30 1 -0.3634 0.5969 0.8365 31 1 -0.3633 0.4259 -0.9352 32 1 -0.3633 -1.0229 0.0987 33 1 2.3175 -2.7226 0.6467 34 1 1.2507 -2.6784 2.1168 35 1 2.7390 -1.3391 4.3414 36 1 3.0295 -6.2848 7.4974 37 1 3.2546 -5.8638 5.7826 38 1 3.6867 -7.8556 6.2862 39 1 4.7691 -10.0297 5.8855 40 1 8.1826 -10.5243 5.3373 41 1 7.3059 -11.2447 8.0096 42 1 5.5123 -11.3501 4.2015 43 1 6.7639 -13.1735 5.2159 44 1 8.5661 -8.3167 6.8025 45 1 7.4925 -6.1369 7.1959 46 1 1.9271 -1.8225 9.0072 47 1 2.2122 -1.0382 6.5255 48 1 4.0685 -0.1327 2.6147 49 1 4.3061 -0.9270 0.9987 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12912156_4549634.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:25 Heat of formation + Delta-G solvation = -82.917580 kcal Electronic energy + Delta-G solvation = -35677.022401 eV Core-core repulsion = 30667.215692 eV Total energy + Delta-G solvation = -5009.806709 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.121 amu Computer time = 3.16 seconds Orbital eigenvalues (eV) -43.83860 -41.32282 -41.21106 -39.39055 -39.10045 -38.03501 -37.13472 -37.08736 -34.79076 -33.83890 -32.85125 -31.95204 -31.36617 -30.74638 -28.22928 -27.17213 -27.03926 -26.10586 -24.64759 -23.77751 -22.63822 -22.25863 -21.33870 -20.89482 -19.84927 -19.44229 -19.36991 -18.40154 -18.18274 -17.41618 -17.33409 -17.24993 -17.22841 -16.99585 -16.88595 -16.66843 -16.40164 -16.03773 -15.88844 -15.79012 -15.55081 -15.26611 -14.73859 -14.60336 -14.55604 -14.34202 -14.28879 -14.21582 -14.19492 -13.98741 -13.91969 -13.84125 -13.66706 -13.43254 -13.15327 -13.12073 -13.04234 -12.33505 -12.22603 -12.16903 -12.03787 -12.02732 -11.99916 -11.70732 -11.27509 -11.13544 -11.07039 -10.37091 -10.32636 -9.98687 -9.97100 -9.15693 -5.01138 -1.12900 -0.06796 0.34967 0.36459 0.82121 1.34125 1.39370 1.57737 1.67295 1.89143 2.01328 2.04452 2.37814 2.45147 2.63393 2.71991 2.95982 3.17129 3.19987 3.34791 3.49159 3.52885 3.53184 3.57138 3.70214 3.70249 3.80264 3.86109 3.87942 3.93955 4.08228 4.22040 4.22596 4.27601 4.32421 4.38153 4.39454 4.48659 4.53074 4.54511 4.54764 4.58730 4.64683 4.71074 4.74818 4.99546 4.99783 5.20565 5.28290 5.31353 5.54995 5.73665 5.75017 6.27305 6.32705 6.62486 7.02214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.425 3.575 3 O -0.937 6.937 4 O -0.933 6.933 5 C -0.611 4.611 6 H 0.151 0.849 7 C -0.125 4.125 8 C 0.134 3.866 9 H 0.117 0.883 10 N -0.706 5.706 11 C 0.593 3.407 12 O -0.527 6.527 13 C -0.213 4.213 14 C 0.068 3.932 15 C 0.135 3.865 16 O -0.304 6.304 17 C 0.142 3.858 18 C -0.202 4.202 19 C -0.073 4.073 20 C -0.158 4.158 21 C -0.063 4.063 22 O -0.541 6.541 23 Si 0.683 3.317 24 C -0.051 4.051 25 C -0.148 4.148 26 O -0.164 6.164 27 C -0.013 4.013 28 C -0.197 4.197 29 C -0.113 4.113 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.129 0.871 33 H 0.117 0.883 34 H 0.091 0.909 35 H 0.403 0.597 36 H 0.085 0.915 37 H 0.116 0.884 38 H 0.132 0.868 39 H 0.130 0.870 40 H 0.112 0.888 41 H 0.378 0.622 42 H -0.258 1.258 43 H -0.255 1.255 44 H 0.133 0.867 45 H 0.133 0.867 46 H 0.215 0.785 47 H 0.161 0.839 48 H 0.096 0.904 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.979 1.809 4.903 8.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.607 3.393 3 O -0.934 6.934 4 O -0.930 6.930 5 C -0.720 4.720 6 H 0.169 0.831 7 C -0.165 4.165 8 C 0.027 3.973 9 H 0.135 0.865 10 N -0.357 5.357 11 C 0.382 3.618 12 O -0.404 6.404 13 C -0.218 4.218 14 C 0.015 3.985 15 C 0.060 3.940 16 O -0.218 6.218 17 C 0.097 3.903 18 C -0.221 4.221 19 C -0.091 4.091 20 C -0.159 4.159 21 C -0.174 4.174 22 O -0.347 6.347 23 Si 0.585 3.415 24 C -0.069 4.069 25 C -0.167 4.167 26 O -0.059 6.059 27 C -0.079 4.079 28 C -0.216 4.216 29 C -0.152 4.152 30 H 0.146 0.854 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.135 0.865 34 H 0.109 0.891 35 H 0.238 0.762 36 H 0.103 0.897 37 H 0.134 0.866 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.130 0.870 41 H 0.226 0.774 42 H -0.182 1.182 43 H -0.180 1.180 44 H 0.151 0.849 45 H 0.151 0.849 46 H 0.231 0.769 47 H 0.179 0.821 48 H 0.114 0.886 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -5.729 0.884 3.198 6.620 hybrid contribution -0.819 1.139 0.598 1.525 sum -6.548 2.023 3.795 7.834 Atomic orbital electron populations 1.30236 1.26582 1.11677 1.11915 1.07784 0.78507 0.75617 0.77436 1.93617 1.79118 1.34273 1.86422 1.93621 1.79154 1.67109 1.53106 1.31845 1.07331 1.09120 1.23688 0.83146 1.23291 1.00870 0.89442 1.02888 1.21689 0.97461 0.98428 0.79691 0.86531 1.45389 1.68054 1.14122 1.08158 1.17171 0.76866 0.83437 0.84375 1.90818 1.45251 1.29649 1.74726 1.21159 1.11377 0.94599 0.94626 1.21969 0.98987 0.95288 0.82227 1.21117 0.80356 0.88624 1.03906 1.86085 1.20977 1.30013 1.84689 1.18946 0.92429 0.83739 0.95218 1.21178 1.00321 0.93111 1.07442 1.20758 0.93724 0.96818 0.97782 1.20225 0.93773 0.96690 1.05188 1.24964 1.04757 0.96518 0.91119 1.86500 1.38442 1.87345 1.22372 0.94876 0.82847 0.78540 0.85207 1.20827 1.00135 0.90673 0.95314 1.20494 0.91589 0.98896 1.05682 1.83813 1.63808 1.26274 1.31996 1.24075 1.02626 0.81795 0.99443 1.22877 1.06029 0.99294 0.93407 1.22994 0.90797 0.98228 1.03166 0.85362 0.85129 0.85209 0.86460 0.89081 0.76227 0.89728 0.86638 0.85013 0.85310 0.87028 0.77434 1.18243 1.18005 0.84895 0.84903 0.76867 0.82114 0.88560 0.87124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 2.97 10.62 101.05 1.07 4.04 16 2 S 2.42 -4.37 5.35 -107.50 -0.57 -4.95 16 3 O -0.94 -2.24 18.10 -57.83 -1.05 -3.28 16 4 O -0.93 -1.84 17.21 -57.83 -1.00 -2.83 16 5 C -0.61 2.54 4.05 -25.82 -0.10 2.44 16 6 H 0.15 -1.05 8.14 -51.93 -0.42 -1.48 16 7 C -0.13 0.39 7.44 -25.82 -0.19 0.20 16 8 C 0.13 -0.24 4.30 -67.12 -0.29 -0.53 16 9 H 0.12 -0.02 7.50 -51.93 -0.39 -0.41 16 10 N -0.71 1.28 5.26 -54.10 -0.28 0.99 16 11 C 0.59 0.77 7.81 -12.54 -0.10 0.67 16 12 O -0.53 -2.33 14.46 5.27 0.08 -2.25 16 13 C -0.21 -0.10 6.32 -103.27 -0.65 -0.76 16 14 C 0.07 0.08 7.00 -34.96 -0.24 -0.17 16 15 C 0.13 0.11 4.74 36.00 0.17 0.28 16 16 O -0.30 -0.93 10.12 -19.40 -0.20 -1.13 16 17 C 0.14 0.35 6.69 -39.21 -0.26 0.09 16 18 C -0.20 -0.19 9.04 -39.43 -0.36 -0.55 16 19 C -0.07 -0.03 8.66 -39.60 -0.34 -0.37 16 20 C -0.16 -0.16 5.35 -104.60 -0.56 -0.72 16 21 C -0.06 -0.03 2.80 36.01 0.10 0.07 16 22 O -0.54 -0.42 12.83 -35.23 -0.45 -0.87 16 23 Si 0.68 -0.33 29.80 -169.99 -5.07 -5.39 16 24 C -0.05 -0.08 9.68 -39.60 -0.38 -0.46 16 25 C -0.15 -0.32 9.99 -39.43 -0.39 -0.72 16 26 O -0.16 -0.06 10.52 7.63 0.08 0.02 16 27 C -0.01 0.03 12.03 29.30 0.35 0.38 16 28 C -0.20 0.46 10.60 -37.46 -0.40 0.06 16 29 C -0.11 0.34 7.41 -25.92 -0.19 0.14 16 30 H 0.13 -0.81 8.14 -51.93 -0.42 -1.23 16 31 H 0.13 -0.56 8.14 -51.93 -0.42 -0.99 16 32 H 0.13 -0.78 8.14 -51.92 -0.42 -1.20 16 33 H 0.12 -0.34 7.38 -51.93 -0.38 -0.72 16 34 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 35 H 0.40 -1.79 7.88 -40.82 -0.32 -2.11 16 36 H 0.08 -0.12 7.65 -51.93 -0.40 -0.52 16 37 H 0.12 0.12 6.02 -51.93 -0.31 -0.19 16 38 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 39 H 0.13 -0.24 4.90 -52.49 -0.26 -0.49 16 40 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 41 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 42 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 43 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 44 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 45 H 0.13 0.18 8.06 -52.48 -0.42 -0.24 16 46 H 0.21 -1.33 8.06 -52.49 -0.42 -1.76 16 47 H 0.16 -0.87 7.74 -52.49 -0.41 -1.27 16 48 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 49 H 0.11 -0.33 8.10 -51.93 -0.42 -0.75 16 LS Contribution 425.53 15.07 6.41 6.41 Total: 0.00 -15.36 425.53 -11.05 -26.42 By element: Atomic # 1 Polarization: -11.04 SS G_CDS: -6.24 Total: -17.28 kcal Atomic # 6 Polarization: 6.90 SS G_CDS: -2.77 Total: 4.13 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.28 Total: 0.99 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -2.53 Total: -10.34 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.07 Total: -5.39 kcal Atomic # 16 Polarization: -4.37 SS G_CDS: -0.57 Total: -4.95 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -15.36 -11.05 -26.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12912156_4549634.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.502 kcal (2) G-P(sol) polarization free energy of solvation -15.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.16 seconds