Wall clock time and date at job start Tue Mar 9 2021 13:31:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 O 1.42102 * 108.57582 * 2 1 4 4 O 1.42100 * 108.57993 * 228.97895 * 2 1 3 5 5 C 1.81402 * 101.92252 * 114.49025 * 2 1 3 6 6 H 1.08994 * 112.85158 * 53.80036 * 5 2 1 7 7 C 1.53782 * 113.61129 * 185.00446 * 5 2 1 8 8 C 1.53786 * 87.07909 * 139.98017 * 7 5 2 9 9 H 1.09002 * 113.61357 * 220.01470 * 8 7 5 10 10 N 1.46497 * 113.61643 * 89.19525 * 8 7 5 11 11 C 1.34775 * 120.00126 * 156.52505 * 10 8 7 12 12 O 1.21286 * 119.99866 * 0.02562 * 11 10 8 13 13 C 1.50697 * 120.00136 * 180.02562 * 11 10 8 14 14 O 1.42898 * 109.47341 * 180.02562 * 13 11 10 15 15 C 1.35914 * 117.00311 * 179.97438 * 14 13 11 16 16 C 1.38791 * 120.06171 * 179.71851 * 15 14 13 17 17 Br 1.89099 * 120.03284 * 0.02562 * 16 15 14 18 18 C 1.38240 * 119.92821 * 179.77243 * 16 15 14 19 19 C 1.38242 * 120.04472 * 0.48172 * 18 16 15 20 20 C 1.50701 * 119.93682 * 179.76975 * 19 18 16 21 21 O 1.42900 * 109.46795 * 245.02202 * 20 19 18 22 22 Si 1.86300 * 109.47411 * 5.02427 * 20 19 18 23 23 C 1.38278 * 120.11707 * 359.79423 * 19 18 16 24 24 C 1.38138 * 120.07330 * 359.95676 * 23 19 18 25 25 C 1.53781 * 87.17350 * 334.60554 * 8 7 5 26 26 H 1.08992 * 109.47107 * 305.50903 * 1 2 3 27 27 H 1.08996 * 109.47486 * 65.51359 * 1 2 3 28 28 H 1.09008 * 109.47001 * 185.51095 * 1 2 3 29 29 H 1.08993 * 113.61979 * 25.43115 * 7 5 2 30 30 H 1.09000 * 113.68722 * 254.53783 * 7 5 2 31 31 H 0.97006 * 120.00058 * 336.53149 * 10 8 7 32 32 H 1.09012 * 109.47186 * 299.99920 * 13 11 10 33 33 H 1.09001 * 109.47748 * 59.99944 * 13 11 10 34 34 H 1.08003 * 119.97046 * 180.23508 * 18 16 15 35 35 H 1.09002 * 109.46796 * 125.02334 * 20 19 18 36 36 H 0.96708 * 113.99992 * 180.02562 * 21 20 19 37 37 H 1.48498 * 109.99652 * 299.99895 * 22 20 19 38 38 H 1.48499 * 110.00100 * 61.31969 * 22 20 19 39 39 H 1.07999 * 119.96160 * 179.97438 * 23 19 18 40 40 H 1.08005 * 120.02612 * 180.02562 * 24 23 19 41 41 H 1.09001 * 113.61695 * 139.93969 * 25 8 7 42 42 H 1.08997 * 113.61223 * 270.84552 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2668 -0.8840 -1.0162 5 6 2.1888 -0.7358 1.6152 6 1 1.6958 -1.6958 1.7676 7 6 3.6895 -0.7535 1.9507 8 6 3.2922 -0.3793 3.3885 9 1 3.9578 0.3504 3.8495 10 7 3.0365 -1.5384 4.2472 11 6 3.1465 -1.4229 5.5855 12 8 3.4566 -0.3592 6.0789 13 6 2.8841 -2.6153 6.4688 14 8 3.0629 -2.2432 7.8369 15 6 2.8623 -3.2102 8.7706 16 6 3.0245 -2.9199 10.1181 17 35 3.5241 -1.1776 10.6574 18 6 2.8152 -3.9043 11.0658 19 6 2.4546 -5.1792 10.6715 20 6 2.2321 -6.2519 11.7064 21 8 3.2176 -7.2750 11.5513 22 14 2.3700 -5.5098 13.4096 23 6 2.2981 -5.4721 9.3291 24 6 2.5009 -4.4908 8.3783 25 6 2.0164 0.2399 2.7936 26 1 -0.3633 0.5969 0.8365 27 1 -0.3634 0.4259 -0.9352 28 1 -0.3633 -1.0230 0.0987 29 1 4.2604 0.0217 1.4397 30 1 4.1454 -1.7400 1.8664 31 1 2.7882 -2.3890 3.8526 32 1 1.8615 -2.9616 6.3175 33 1 3.5798 -3.4153 6.2156 34 1 2.9375 -3.6781 12.1148 35 1 1.2388 -6.6815 11.5766 36 1 3.1350 -8.0002 12.1858 37 1 3.7198 -4.9206 13.5991 38 1 1.3297 -4.4663 13.5947 39 1 2.0167 -6.4691 9.0238 40 1 2.3781 -4.7202 7.3301 41 1 1.1222 0.0537 3.3886 42 1 2.1291 1.2872 2.5135 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12912156_6201210.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:31:31 Heat of formation + Delta-G solvation = -92.330700 kcal Electronic energy + Delta-G solvation = -28757.612033 eV Core-core repulsion = 24266.477369 eV Total energy + Delta-G solvation = -4491.134663 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.017 amu Computer time = 2.01 seconds Orbital eigenvalues (eV) -41.88618 -41.24936 -39.77507 -38.86918 -38.05189 -37.37208 -37.11002 -34.67040 -33.57780 -32.36595 -30.80496 -30.59614 -29.80101 -27.21576 -26.98397 -26.29480 -24.22282 -22.53066 -22.05314 -21.28525 -19.91601 -19.66571 -18.90661 -18.51935 -18.14978 -17.68651 -17.32730 -17.31595 -17.19736 -17.00197 -16.76018 -16.27865 -15.91663 -15.71112 -15.32504 -15.01286 -14.64586 -14.60173 -14.39864 -14.32268 -14.26492 -14.15480 -14.00420 -13.92088 -13.78761 -13.73056 -13.17658 -13.06719 -12.58965 -12.38735 -12.37016 -12.25891 -12.23687 -12.06095 -12.05254 -11.81352 -11.31881 -11.13010 -11.07721 -10.44610 -10.42403 -10.08238 -9.38034 -5.06791 -1.15389 -0.13587 -0.03431 0.63023 1.14874 1.17896 1.28251 1.55566 1.56621 1.89364 2.23799 2.26411 2.34394 2.61464 2.91782 3.13135 3.19107 3.20580 3.31404 3.48179 3.50099 3.56949 3.66587 3.68717 3.69947 3.77899 3.83548 3.91759 4.17132 4.17996 4.19820 4.23892 4.32263 4.44959 4.48006 4.51346 4.55048 4.64826 4.66382 4.88115 5.15760 5.16894 5.28849 5.87631 6.12316 6.50406 6.89509 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.654 4.654 2 S 2.425 3.575 3 O -0.932 6.932 4 O -0.937 6.937 5 C -0.612 4.612 6 H 0.151 0.849 7 C -0.113 4.113 8 C 0.135 3.865 9 H 0.117 0.883 10 N -0.712 5.712 11 C 0.519 3.481 12 O -0.500 6.500 13 C 0.037 3.963 14 O -0.273 6.273 15 C 0.161 3.839 16 C -0.118 4.118 17 Br -0.022 7.022 18 C -0.055 4.055 19 C -0.106 4.106 20 C -0.064 4.064 21 O -0.545 6.545 22 Si 0.674 3.326 23 C -0.032 4.032 24 C -0.203 4.203 25 C -0.126 4.126 26 H 0.129 0.871 27 H 0.130 0.870 28 H 0.128 0.872 29 H 0.112 0.888 30 H 0.096 0.904 31 H 0.404 0.596 32 H 0.098 0.902 33 H 0.099 0.901 34 H 0.135 0.865 35 H 0.078 0.922 36 H 0.384 0.616 37 H -0.247 1.247 38 H -0.251 1.251 39 H 0.139 0.861 40 H 0.141 0.859 41 H 0.091 0.909 42 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.404 -8.185 1.053 9.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.607 3.393 3 O -0.930 6.930 4 O -0.934 6.934 5 C -0.720 4.720 6 H 0.169 0.831 7 C -0.152 4.152 8 C 0.029 3.971 9 H 0.135 0.865 10 N -0.366 5.366 11 C 0.303 3.697 12 O -0.372 6.372 13 C -0.041 4.041 14 O -0.185 6.185 15 C 0.113 3.887 16 C -0.198 4.198 17 Br 0.063 6.937 18 C -0.074 4.074 19 C -0.107 4.107 20 C -0.175 4.175 21 O -0.352 6.352 22 Si 0.575 3.425 23 C -0.050 4.050 24 C -0.222 4.222 25 C -0.166 4.166 26 H 0.148 0.852 27 H 0.149 0.851 28 H 0.146 0.854 29 H 0.130 0.870 30 H 0.115 0.885 31 H 0.238 0.762 32 H 0.116 0.884 33 H 0.117 0.883 34 H 0.152 0.848 35 H 0.095 0.905 36 H 0.232 0.768 37 H -0.171 1.171 38 H -0.175 1.175 39 H 0.157 0.843 40 H 0.159 0.841 41 H 0.110 0.890 42 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -4.018 -5.092 0.988 6.561 hybrid contribution -1.176 -1.412 -0.545 1.917 sum -5.194 -6.504 0.443 8.335 Atomic orbital electron populations 1.30230 1.26511 1.11613 1.12026 1.07786 0.78533 0.75912 0.77100 1.93625 1.79168 1.34005 1.86156 1.93618 1.79128 1.67068 1.53636 1.31849 1.07334 1.12173 1.20661 0.83065 1.23009 0.91020 1.05152 0.95999 1.21688 0.97206 0.88536 0.89704 0.86472 1.45433 1.71964 1.13881 1.05323 1.19963 0.77718 0.89564 0.82416 1.90830 1.44096 1.28491 1.73777 1.22536 1.03748 0.96835 0.81021 1.86275 1.84108 1.34388 1.13718 1.18574 0.94384 0.87860 0.87920 1.20929 1.12313 0.94457 0.92094 1.96810 1.90889 1.15389 1.90586 1.20739 0.96507 0.91880 0.98318 1.19235 1.03899 0.93007 0.94575 1.24542 0.94231 0.91956 1.06810 1.86487 1.53264 1.34715 1.60738 0.95301 0.81471 0.85000 0.80723 1.20934 0.93827 0.99009 0.91279 1.21281 1.07813 0.92028 1.01087 1.23291 1.00692 0.98764 0.93824 0.85197 0.85104 0.85359 0.86958 0.88516 0.76162 0.88387 0.88287 0.84766 0.90453 0.76802 1.17103 1.17522 0.84278 0.84095 0.89016 0.86499 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 3.10 10.62 101.05 1.07 4.17 16 2 S 2.42 -5.12 5.30 -107.50 -0.57 -5.69 16 3 O -0.93 -1.63 17.35 -57.83 -1.00 -2.63 16 4 O -0.94 -1.98 18.10 -57.83 -1.05 -3.03 16 5 C -0.61 2.89 4.05 -25.82 -0.10 2.79 16 6 H 0.15 -1.16 8.14 -51.93 -0.42 -1.58 16 7 C -0.11 0.42 7.41 -25.92 -0.19 0.22 16 8 C 0.14 -0.34 4.29 -67.12 -0.29 -0.63 16 9 H 0.12 -0.08 7.50 -51.93 -0.39 -0.47 16 10 N -0.71 2.42 5.26 -53.02 -0.28 2.15 16 11 C 0.52 -0.01 7.91 -10.99 -0.09 -0.09 16 12 O -0.50 -2.59 16.12 -14.36 -0.23 -2.82 16 13 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 14 O -0.27 -0.67 9.00 -39.38 -0.35 -1.02 16 15 C 0.16 0.34 6.68 -39.20 -0.26 0.08 16 16 C -0.12 -0.42 6.24 -39.38 -0.25 -0.66 16 17 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.35 16 18 C -0.06 -0.15 8.40 -39.58 -0.33 -0.48 16 19 C -0.11 -0.13 5.38 -104.60 -0.56 -0.70 16 20 C -0.06 0.07 2.79 36.01 0.10 0.17 16 21 O -0.55 0.53 12.81 -35.23 -0.45 0.08 16 22 Si 0.67 -0.94 29.85 -169.99 -5.07 -6.01 16 23 C -0.03 0.00 9.68 -39.60 -0.38 -0.38 16 24 C -0.20 0.11 9.04 -39.44 -0.36 -0.25 16 25 C -0.13 0.46 7.44 -25.82 -0.19 0.27 16 26 H 0.13 -0.80 8.14 -51.93 -0.42 -1.22 16 27 H 0.13 -0.59 8.14 -51.93 -0.42 -1.01 16 28 H 0.13 -0.83 8.14 -51.92 -0.42 -1.26 16 29 H 0.11 -0.39 8.10 -51.93 -0.42 -0.81 16 30 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 31 H 0.40 -2.74 8.71 -40.82 -0.36 -3.09 16 32 H 0.10 -0.49 7.66 -51.92 -0.40 -0.89 16 33 H 0.10 -0.46 7.66 -51.93 -0.40 -0.86 16 34 H 0.14 0.34 4.86 -52.48 -0.26 0.09 16 35 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 36 H 0.38 -2.26 8.74 45.56 0.40 -1.86 16 37 H -0.25 -0.48 7.05 56.52 0.40 -0.08 16 38 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 39 H 0.14 -0.30 8.06 -52.49 -0.42 -0.72 16 40 H 0.14 -0.56 6.30 -52.48 -0.33 -0.89 16 41 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 42 H 0.12 -0.40 7.49 -51.93 -0.39 -0.79 16 LS Contribution 388.16 15.07 5.85 5.85 Total: 0.00 -16.38 388.16 -12.17 -28.55 By element: Atomic # 1 Polarization: -12.60 SS G_CDS: -5.11 Total: -17.71 kcal Atomic # 6 Polarization: 6.27 SS G_CDS: -1.64 Total: 4.62 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -0.28 Total: 2.15 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -3.09 Total: -9.41 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.01 kcal Atomic # 16 Polarization: -5.12 SS G_CDS: -0.57 Total: -5.69 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -16.38 -12.17 -28.55 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12912156_6201210.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.778 kcal (2) G-P(sol) polarization free energy of solvation -16.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.02 seconds