Wall clock time and date at job start Tue Mar 9 2021 13:13:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46828 * 2 1 4 4 C 1.50699 * 109.47570 * 120.00047 * 2 1 3 5 5 C 1.38250 * 119.94072 * 245.30382 * 4 2 1 6 6 C 1.38237 * 120.04290 * 180.25328 * 5 4 2 7 7 Br 1.89100 * 120.03744 * 179.71771 * 6 5 4 8 8 C 1.38796 * 119.92860 * 359.44604 * 6 5 4 9 9 O 1.35913 * 120.06010 * 180.25576 * 8 6 5 10 10 C 1.42899 * 116.99934 * 179.97438 * 9 8 6 11 11 C 1.50703 * 109.46829 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00100 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99779 * 180.02562 * 11 10 9 14 14 C 1.46495 * 120.00153 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84726 * 23.80883 * 14 13 11 16 16 C 1.53782 * 113.61795 * 155.00014 * 14 13 11 17 17 C 1.53778 * 87.08318 * 139.98372 * 16 14 13 18 18 C 1.52998 * 113.61362 * 89.11900 * 17 16 14 19 19 O 1.42900 * 109.47378 * 180.02562 * 18 17 16 20 20 C 1.50697 * 113.61491 * 219.93586 * 17 16 14 21 21 C 1.38233 * 119.99947 * 359.72946 * 20 17 16 22 22 C 1.38239 * 120.00055 * 179.78553 * 21 20 17 23 23 C 1.38234 * 119.99653 * 0.46459 * 22 21 20 24 24 C 1.38233 * 120.00099 * 359.76687 * 23 22 21 25 25 C 1.38233 * 120.00075 * 0.02562 * 24 23 22 26 26 C 1.53776 * 87.07938 * 334.56927 * 17 16 14 27 27 C 1.38721 * 119.87861 * 0.27335 * 8 6 5 28 28 C 1.38146 * 119.95862 * 359.97438 * 27 8 6 29 29 H 0.96696 * 114.00122 * 60.00171 * 1 2 3 30 30 H 1.09004 * 109.47158 * 240.00386 * 2 1 3 31 31 H 1.48499 * 109.99931 * 60.00358 * 3 2 1 32 32 H 1.48508 * 110.00006 * 181.32018 * 3 2 1 33 33 H 1.07997 * 119.97780 * 359.97128 * 5 4 2 34 34 H 1.09000 * 109.47385 * 299.99629 * 10 9 8 35 35 H 1.09002 * 109.47373 * 60.00268 * 10 9 8 36 36 H 0.97005 * 120.00363 * 359.97438 * 13 11 10 37 37 H 1.09000 * 113.61427 * 254.53695 * 16 14 13 38 38 H 1.09003 * 113.61252 * 25.35226 * 16 14 13 39 39 H 1.09003 * 109.46924 * 299.99899 * 18 17 16 40 40 H 1.08997 * 109.47580 * 60.00043 * 18 17 16 41 41 H 0.96693 * 114.00406 * 179.97438 * 19 18 17 42 42 H 1.08000 * 120.00205 * 359.97438 * 21 20 17 43 43 H 1.07996 * 120.00347 * 180.24544 * 22 21 20 44 44 H 1.08007 * 119.99919 * 179.78859 * 23 22 21 45 45 H 1.08009 * 119.99779 * 180.02562 * 24 23 22 46 46 H 1.08004 * 119.99879 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61858 * 270.88233 * 26 17 16 48 48 H 1.09003 * 113.61274 * 139.98192 * 26 17 16 49 49 H 1.08003 * 120.01703 * 180.02562 * 27 8 6 50 50 H 1.07996 * 119.96442 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.6334 -0.0096 2.1935 6 6 3.0998 -0.6603 3.3205 7 35 4.0668 0.2967 4.6338 8 6 2.8527 -2.0155 3.4897 9 8 3.3055 -2.6568 4.5992 10 6 3.0137 -4.0515 4.7069 11 6 3.5908 -4.5876 5.9917 12 8 4.1923 -3.8481 6.7415 13 7 3.4385 -5.8890 6.3074 14 6 4.0000 -6.4104 7.5561 15 1 4.1391 -5.6381 8.3125 16 6 3.2783 -7.6631 8.0803 17 6 4.6659 -8.2092 8.4560 18 6 5.1187 -7.8162 9.8636 19 8 6.4124 -8.3668 10.1190 20 6 4.8310 -9.6810 8.1778 21 6 3.7833 -10.4045 7.6396 22 6 3.9362 -11.7537 7.3802 23 6 5.1337 -12.3814 7.6680 24 6 6.1798 -11.6589 8.2107 25 6 6.0283 -10.3089 8.4660 26 6 5.2346 -7.3038 7.3507 27 6 2.1430 -2.7144 2.5242 28 6 1.6836 -2.0605 1.3974 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7704 -0.0322 33 1 2.8214 1.0458 2.0631 34 1 1.9336 -4.1980 4.7044 35 1 3.4543 -4.5812 3.8623 36 1 2.9571 -6.4805 5.7079 37 1 2.6375 -7.4699 8.9406 38 1 2.7782 -8.2373 7.3004 39 1 5.1650 -6.7299 9.9403 40 1 4.4085 -8.2022 10.5948 41 1 6.7632 -8.1570 10.9953 42 1 2.8462 -9.9150 7.4188 43 1 3.1190 -12.3181 6.9560 44 1 5.2520 -13.4363 7.4686 45 1 7.1156 -12.1494 8.4351 46 1 6.8456 -9.7445 8.8904 47 1 5.2705 -7.7805 6.3712 48 1 6.1733 -6.8206 7.6220 49 1 1.9491 -3.7690 2.6538 50 1 1.1314 -2.6046 0.6454 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270510_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:10 Heat of formation + Delta-G solvation = -48.521032 kcal Electronic energy + Delta-G solvation = -34321.877959 eV Core-core repulsion = 29521.956931 eV Total energy + Delta-G solvation = -4799.921028 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.03246 -41.57658 -40.39603 -39.23321 -38.73868 -37.40039 -37.25974 -34.86644 -33.53911 -32.34200 -31.84399 -31.71689 -30.50168 -29.70919 -28.14627 -27.06225 -26.38454 -24.87352 -24.08238 -23.23113 -22.61909 -22.18735 -21.70961 -19.84552 -19.64996 -18.71127 -18.57389 -18.36255 -17.83541 -17.58831 -17.30905 -16.99206 -16.76757 -16.32946 -16.16181 -16.02783 -15.90115 -15.51970 -15.47357 -15.31610 -15.01815 -14.64850 -14.49177 -14.30627 -14.20072 -14.01807 -13.88745 -13.68489 -13.65699 -13.52624 -13.39647 -13.12698 -12.53431 -12.47859 -12.32558 -12.29963 -12.19308 -12.01427 -11.88198 -11.77312 -11.60038 -11.42897 -11.08154 -10.92537 -10.86335 -10.41173 -10.20212 -10.03541 -9.71719 -9.50362 -9.32750 -5.04198 -0.08809 0.01659 0.50135 0.61545 0.67492 1.20862 1.30409 1.42022 1.59408 1.92232 2.30321 2.39891 2.78479 3.01806 3.24331 3.29989 3.34711 3.43377 3.54355 3.59185 3.65755 3.71104 3.77963 3.81314 3.84415 3.89572 3.96082 4.11361 4.19620 4.22261 4.24538 4.29337 4.33393 4.40750 4.47621 4.52489 4.56355 4.65047 4.69909 4.71205 4.84627 4.88743 4.93308 4.95407 5.00458 5.17547 5.21375 5.31245 5.32395 5.37312 5.65942 5.77995 5.82419 5.95474 6.20568 6.27928 6.53498 6.60024 7.03494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.064 4.064 3 Si 0.674 3.326 4 C -0.107 4.107 5 C -0.055 4.055 6 C -0.118 4.118 7 Br -0.023 7.023 8 C 0.162 3.838 9 O -0.273 6.273 10 C 0.036 3.964 11 C 0.517 3.483 12 O -0.506 6.506 13 N -0.717 5.717 14 C 0.124 3.876 15 H 0.119 0.881 16 C -0.137 4.137 17 C -0.038 4.038 18 C 0.100 3.900 19 O -0.563 6.563 20 C -0.068 4.068 21 C -0.124 4.124 22 C -0.126 4.126 23 C -0.123 4.123 24 C -0.127 4.127 25 C -0.096 4.096 26 C -0.132 4.132 27 C -0.203 4.203 28 C -0.032 4.032 29 H 0.384 0.616 30 H 0.078 0.922 31 H -0.247 1.247 32 H -0.251 1.251 33 H 0.135 0.865 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.403 0.597 37 H 0.083 0.917 38 H 0.100 0.900 39 H 0.054 0.946 40 H 0.053 0.947 41 H 0.379 0.621 42 H 0.121 0.879 43 H 0.119 0.881 44 H 0.119 0.881 45 H 0.120 0.880 46 H 0.147 0.853 47 H 0.089 0.911 48 H 0.080 0.920 49 H 0.142 0.858 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.778 -3.365 -4.677 6.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.175 4.175 3 Si 0.575 3.425 4 C -0.108 4.108 5 C -0.075 4.075 6 C -0.198 4.198 7 Br 0.062 6.938 8 C 0.113 3.887 9 O -0.185 6.185 10 C -0.043 4.043 11 C 0.302 3.698 12 O -0.379 6.379 13 N -0.370 5.370 14 C 0.020 3.980 15 H 0.137 0.863 16 C -0.174 4.174 17 C -0.039 4.039 18 C 0.022 3.978 19 O -0.370 6.370 20 C -0.068 4.068 21 C -0.141 4.141 22 C -0.144 4.144 23 C -0.141 4.141 24 C -0.145 4.145 25 C -0.113 4.113 26 C -0.171 4.171 27 C -0.222 4.222 28 C -0.050 4.050 29 H 0.232 0.768 30 H 0.095 0.905 31 H -0.171 1.171 32 H -0.175 1.175 33 H 0.152 0.848 34 H 0.116 0.884 35 H 0.116 0.884 36 H 0.238 0.762 37 H 0.101 0.899 38 H 0.118 0.882 39 H 0.072 0.928 40 H 0.071 0.929 41 H 0.227 0.773 42 H 0.139 0.861 43 H 0.137 0.863 44 H 0.137 0.863 45 H 0.138 0.862 46 H 0.164 0.836 47 H 0.108 0.892 48 H 0.099 0.901 49 H 0.159 0.841 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.356 -2.288 -3.067 4.493 hybrid contribution -0.522 -1.187 -0.008 1.297 sum -2.878 -3.475 -3.075 5.460 Atomic orbital electron populations 1.86486 1.17076 1.81812 1.49839 1.24543 0.85801 1.10235 0.96933 0.95338 0.81244 0.78264 0.87671 1.19230 1.01261 0.94364 0.95972 1.20733 0.96177 0.99128 0.91413 1.20920 1.08234 0.92522 0.98157 1.96801 1.72206 1.72932 1.51830 1.18592 0.93041 0.90598 0.86437 1.86279 1.72767 1.21511 1.37900 1.22578 1.02025 0.81796 0.97871 1.19975 0.80390 0.82440 0.87033 1.90804 1.39610 1.56888 1.50608 1.45771 1.58316 1.09291 1.23621 1.22600 0.94118 0.94715 0.86563 0.86279 1.23553 0.96038 0.95671 1.02179 1.20500 0.96659 0.92027 0.94713 1.21894 0.85018 0.96811 0.94066 1.86457 1.33577 1.77569 1.39353 1.19378 0.94287 0.93541 0.99574 1.21112 0.98554 0.94330 1.00139 1.21099 0.97708 0.94783 1.00772 1.21206 0.93672 0.99907 0.99283 1.21263 0.98925 0.94694 0.99594 1.21549 0.98075 0.94345 0.97336 1.23534 0.98678 0.96042 0.98823 1.21292 1.04117 1.00984 0.95838 1.20933 0.94593 0.93302 0.96189 0.76840 0.90454 1.17124 1.17518 0.84800 0.88408 0.88439 0.76235 0.89850 0.88183 0.92750 0.92915 0.77257 0.86093 0.86255 0.86331 0.86231 0.83552 0.89217 0.90105 0.84071 0.84296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.34 12.81 -35.23 -0.45 -0.12 16 2 C -0.06 0.05 2.79 36.01 0.10 0.15 16 3 Si 0.67 -0.69 29.85 -169.99 -5.07 -5.76 16 4 C -0.11 -0.19 5.38 -104.60 -0.56 -0.75 16 5 C -0.06 -0.18 8.40 -39.58 -0.33 -0.51 16 6 C -0.12 -0.49 6.24 -39.38 -0.25 -0.73 16 7 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.37 16 8 C 0.16 0.46 6.68 -39.20 -0.26 0.20 16 9 O -0.27 -0.91 9.00 -39.38 -0.35 -1.26 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 11 C 0.52 0.65 7.91 -10.98 -0.09 0.56 16 12 O -0.51 -3.18 16.10 -14.35 -0.23 -3.41 16 13 N -0.72 1.36 5.35 -53.02 -0.28 1.07 16 14 C 0.12 -0.14 3.89 -67.12 -0.26 -0.40 16 15 H 0.12 0.06 6.98 -51.93 -0.36 -0.30 16 16 C -0.14 0.35 6.43 -25.92 -0.17 0.18 16 17 C -0.04 0.03 1.06 -154.85 -0.16 -0.13 16 18 C 0.10 -0.12 6.38 37.16 0.24 0.12 16 19 O -0.56 0.39 10.04 -35.23 -0.35 0.04 16 20 C -0.07 -0.06 5.04 -104.63 -0.53 -0.58 16 21 C -0.12 -0.04 9.20 -39.58 -0.36 -0.40 16 22 C -0.13 -0.09 10.05 -39.58 -0.40 -0.49 16 23 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 24 C -0.13 -0.20 10.05 -39.59 -0.40 -0.60 16 25 C -0.10 -0.18 8.84 -39.59 -0.35 -0.53 16 26 C -0.13 0.06 6.99 -25.92 -0.18 -0.12 16 27 C -0.20 -0.04 9.04 -39.44 -0.36 -0.39 16 28 C -0.03 -0.01 9.68 -39.60 -0.38 -0.40 16 29 H 0.38 -2.13 8.74 45.56 0.40 -1.73 16 30 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 31 H -0.25 -0.56 7.04 56.52 0.40 -0.16 16 32 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 33 H 0.13 0.40 4.86 -52.49 -0.26 0.15 16 34 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 35 H 0.10 -0.36 7.66 -51.93 -0.40 -0.75 16 36 H 0.40 -2.05 8.73 -40.82 -0.36 -2.40 16 37 H 0.08 -0.24 8.10 -51.93 -0.42 -0.66 16 38 H 0.10 -0.37 5.94 -51.93 -0.31 -0.68 16 39 H 0.05 -0.09 7.34 -51.93 -0.38 -0.47 16 40 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 42 H 0.12 -0.22 5.77 -52.49 -0.30 -0.52 16 43 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.12 -0.04 8.06 -52.48 -0.42 -0.47 16 45 H 0.12 0.03 8.06 -52.48 -0.42 -0.40 16 46 H 0.15 0.29 5.44 -52.48 -0.29 0.00 16 47 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 48 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 49 H 0.14 -0.45 6.30 -52.48 -0.33 -0.78 16 50 H 0.14 -0.22 8.06 -52.49 -0.42 -0.64 16 LS Contribution 426.93 15.07 6.43 6.43 Total: 0.00 -11.83 426.93 -13.04 -24.86 By element: Atomic # 1 Polarization: -8.71 SS G_CDS: -5.55 Total: -14.27 kcal Atomic # 6 Polarization: -0.31 SS G_CDS: -4.91 Total: -5.22 kcal Atomic # 7 Polarization: 1.36 SS G_CDS: -0.28 Total: 1.07 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -1.39 Total: -4.75 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.07 Total: -5.76 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.37 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -11.83 -13.04 -24.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.656 kcal (2) G-P(sol) polarization free energy of solvation -11.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds