Wall clock time and date at job start Tue Mar 9 2021 13:13:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46828 * 2 1 4 4 C 1.50699 * 109.47570 * 120.00047 * 2 1 3 5 5 C 1.38250 * 119.94072 * 245.30382 * 4 2 1 6 6 C 1.38237 * 120.04290 * 180.25328 * 5 4 2 7 7 Br 1.89100 * 120.03744 * 179.71771 * 6 5 4 8 8 C 1.38796 * 119.92860 * 359.44604 * 6 5 4 9 9 O 1.35913 * 120.06010 * 180.25576 * 8 6 5 10 10 C 1.42899 * 116.99934 * 179.97438 * 9 8 6 11 11 C 1.50703 * 109.46829 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00100 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99779 * 180.02562 * 11 10 9 14 14 C 1.46495 * 120.00153 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84726 * 23.80883 * 14 13 11 16 16 C 1.53782 * 113.61795 * 155.00014 * 14 13 11 17 17 C 1.53778 * 87.08318 * 139.98372 * 16 14 13 18 18 C 1.52998 * 113.61362 * 89.11900 * 17 16 14 19 19 O 1.42900 * 109.47378 * 180.02562 * 18 17 16 20 20 C 1.50697 * 113.61491 * 219.93586 * 17 16 14 21 21 C 1.38233 * 119.99947 * 359.72946 * 20 17 16 22 22 C 1.38239 * 120.00055 * 179.78553 * 21 20 17 23 23 C 1.38234 * 119.99653 * 0.46459 * 22 21 20 24 24 C 1.38233 * 120.00099 * 359.76687 * 23 22 21 25 25 C 1.38233 * 120.00075 * 0.02562 * 24 23 22 26 26 C 1.53776 * 87.07938 * 334.56927 * 17 16 14 27 27 C 1.38721 * 119.87861 * 0.27335 * 8 6 5 28 28 C 1.38146 * 119.95862 * 359.97438 * 27 8 6 29 29 H 0.96696 * 114.00122 * 60.00171 * 1 2 3 30 30 H 1.09004 * 109.47158 * 240.00386 * 2 1 3 31 31 H 1.48499 * 109.99931 * 60.00358 * 3 2 1 32 32 H 1.48508 * 110.00006 * 181.32018 * 3 2 1 33 33 H 1.07997 * 119.97780 * 359.97128 * 5 4 2 34 34 H 1.09000 * 109.47385 * 299.99629 * 10 9 8 35 35 H 1.09002 * 109.47373 * 60.00268 * 10 9 8 36 36 H 0.97005 * 120.00363 * 359.97438 * 13 11 10 37 37 H 1.09000 * 113.61427 * 254.53695 * 16 14 13 38 38 H 1.09003 * 113.61252 * 25.35226 * 16 14 13 39 39 H 1.09003 * 109.46924 * 299.99899 * 18 17 16 40 40 H 1.08997 * 109.47580 * 60.00043 * 18 17 16 41 41 H 0.96693 * 114.00406 * 179.97438 * 19 18 17 42 42 H 1.08000 * 120.00205 * 359.97438 * 21 20 17 43 43 H 1.07996 * 120.00347 * 180.24544 * 22 21 20 44 44 H 1.08007 * 119.99919 * 179.78859 * 23 22 21 45 45 H 1.08009 * 119.99779 * 180.02562 * 24 23 22 46 46 H 1.08004 * 119.99879 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61858 * 270.88233 * 26 17 16 48 48 H 1.09003 * 113.61274 * 139.98192 * 26 17 16 49 49 H 1.08003 * 120.01703 * 180.02562 * 27 8 6 50 50 H 1.07996 * 119.96442 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.6334 -0.0096 2.1935 6 6 3.0998 -0.6603 3.3205 7 35 4.0668 0.2967 4.6338 8 6 2.8527 -2.0155 3.4897 9 8 3.3055 -2.6568 4.5992 10 6 3.0137 -4.0515 4.7069 11 6 3.5908 -4.5876 5.9917 12 8 4.1923 -3.8481 6.7415 13 7 3.4385 -5.8890 6.3074 14 6 4.0000 -6.4104 7.5561 15 1 4.1391 -5.6381 8.3125 16 6 3.2783 -7.6631 8.0803 17 6 4.6659 -8.2092 8.4560 18 6 5.1187 -7.8162 9.8636 19 8 6.4124 -8.3668 10.1190 20 6 4.8310 -9.6810 8.1778 21 6 3.7833 -10.4045 7.6396 22 6 3.9362 -11.7537 7.3802 23 6 5.1337 -12.3814 7.6680 24 6 6.1798 -11.6589 8.2107 25 6 6.0283 -10.3089 8.4660 26 6 5.2346 -7.3038 7.3507 27 6 2.1430 -2.7144 2.5242 28 6 1.6836 -2.0605 1.3974 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7704 -0.0322 33 1 2.8214 1.0458 2.0631 34 1 1.9336 -4.1980 4.7044 35 1 3.4543 -4.5812 3.8623 36 1 2.9571 -6.4805 5.7079 37 1 2.6375 -7.4699 8.9406 38 1 2.7782 -8.2373 7.3004 39 1 5.1650 -6.7299 9.9403 40 1 4.4085 -8.2022 10.5948 41 1 6.7632 -8.1570 10.9953 42 1 2.8462 -9.9150 7.4188 43 1 3.1190 -12.3181 6.9560 44 1 5.2520 -13.4363 7.4686 45 1 7.1156 -12.1494 8.4351 46 1 6.8456 -9.7445 8.8904 47 1 5.2705 -7.7805 6.3712 48 1 6.1733 -6.8206 7.6220 49 1 1.9491 -3.7690 2.6538 50 1 1.1314 -2.6046 0.6454 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13270510_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:08 Heat of formation + Delta-G solvation = -50.534827 kcal Electronic energy + Delta-G solvation = -34321.965284 eV Core-core repulsion = 29521.956931 eV Total energy + Delta-G solvation = -4800.008353 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.01082 -41.60079 -40.45440 -39.24211 -38.76473 -37.32192 -37.20746 -34.89604 -33.66069 -32.36099 -31.84925 -31.72860 -30.62108 -29.71268 -28.07195 -26.96487 -26.35880 -24.84523 -24.12789 -23.23808 -22.63524 -22.19802 -21.72482 -19.80066 -19.66694 -18.64485 -18.52476 -18.28484 -17.79539 -17.55887 -17.35274 -17.00041 -16.76033 -16.32762 -16.14596 -16.03337 -15.87508 -15.57242 -15.47642 -15.29401 -15.04714 -14.62842 -14.47804 -14.35169 -14.22825 -14.04488 -13.87884 -13.73813 -13.61137 -13.49435 -13.34839 -13.08687 -12.56150 -12.45802 -12.31447 -12.26469 -12.21438 -12.14520 -11.88519 -11.85393 -11.55962 -11.37334 -11.36659 -11.02183 -10.79390 -10.31464 -10.18505 -10.14523 -9.74843 -9.52602 -9.42335 -5.01221 -0.17907 -0.05003 0.46675 0.47861 0.57875 1.27476 1.34006 1.39172 1.59020 1.94841 2.26173 2.43956 2.83781 3.09606 3.27176 3.39852 3.41041 3.52509 3.57426 3.67494 3.75025 3.79883 3.85375 3.96151 3.98354 3.98491 4.02960 4.16343 4.19879 4.23148 4.30749 4.34856 4.39911 4.49124 4.57900 4.59085 4.65087 4.67611 4.74049 4.79444 4.83874 4.92382 4.96031 4.97936 5.04836 5.18367 5.19709 5.30892 5.33653 5.43747 5.64572 5.74067 5.80211 5.96380 6.19303 6.41212 6.84949 6.92610 7.09280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.059 4.059 3 Si 0.750 3.250 4 C -0.120 4.120 5 C -0.076 4.076 6 C -0.143 4.143 7 Br -0.051 7.051 8 C 0.151 3.849 9 O -0.304 6.304 10 C 0.031 3.969 11 C 0.513 3.487 12 O -0.568 6.568 13 N -0.697 5.697 14 C 0.124 3.876 15 H 0.098 0.902 16 C -0.120 4.120 17 C -0.040 4.040 18 C 0.097 3.903 19 O -0.579 6.579 20 C -0.073 4.073 21 C -0.126 4.126 22 C -0.133 4.133 23 C -0.136 4.136 24 C -0.143 4.143 25 C -0.114 4.114 26 C -0.131 4.131 27 C -0.190 4.190 28 C -0.028 4.028 29 H 0.405 0.595 30 H 0.109 0.891 31 H -0.301 1.301 32 H -0.292 1.292 33 H 0.122 0.878 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.422 0.578 37 H 0.093 0.907 38 H 0.120 0.880 39 H 0.055 0.945 40 H 0.059 0.941 41 H 0.392 0.608 42 H 0.146 0.854 43 H 0.138 0.862 44 H 0.130 0.870 45 H 0.124 0.876 46 H 0.138 0.862 47 H 0.092 0.908 48 H 0.058 0.942 49 H 0.182 0.818 50 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.429 -5.810 -6.862 11.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.170 4.170 3 Si 0.658 3.342 4 C -0.122 4.122 5 C -0.096 4.096 6 C -0.223 4.223 7 Br 0.034 6.966 8 C 0.103 3.897 9 O -0.216 6.216 10 C -0.047 4.047 11 C 0.299 3.701 12 O -0.446 6.446 13 N -0.351 5.351 14 C 0.019 3.981 15 H 0.116 0.884 16 C -0.158 4.158 17 C -0.041 4.041 18 C 0.019 3.981 19 O -0.388 6.388 20 C -0.073 4.073 21 C -0.144 4.144 22 C -0.151 4.151 23 C -0.154 4.154 24 C -0.161 4.161 25 C -0.131 4.131 26 C -0.170 4.170 27 C -0.209 4.209 28 C -0.047 4.047 29 H 0.257 0.743 30 H 0.127 0.873 31 H -0.230 1.230 32 H -0.219 1.219 33 H 0.139 0.861 34 H 0.150 0.850 35 H 0.149 0.851 36 H 0.261 0.739 37 H 0.111 0.889 38 H 0.138 0.862 39 H 0.073 0.927 40 H 0.077 0.923 41 H 0.243 0.757 42 H 0.164 0.836 43 H 0.156 0.844 44 H 0.148 0.852 45 H 0.142 0.858 46 H 0.156 0.844 47 H 0.111 0.889 48 H 0.077 0.923 49 H 0.199 0.801 50 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges -5.045 -4.775 -5.301 8.738 hybrid contribution 0.335 -0.447 0.712 0.905 sum -4.710 -5.221 -4.589 8.397 Atomic orbital electron populations 1.86432 1.16713 1.82248 1.51643 1.24466 0.86130 1.09374 0.97032 0.94701 0.77670 0.76951 0.84830 1.19614 1.00834 0.95438 0.96270 1.20772 0.97634 0.98904 0.92243 1.21071 1.09467 0.93535 0.98188 1.96742 1.73011 1.73744 1.53068 1.18745 0.93660 0.90196 0.87106 1.86241 1.73322 1.23687 1.38361 1.22905 1.04177 0.80137 0.97446 1.20505 0.79470 0.82773 0.87302 1.90785 1.42592 1.58557 1.52695 1.45625 1.57343 1.08662 1.23464 1.22467 0.94416 0.94630 0.86570 0.88362 1.23521 0.95142 0.94207 1.02907 1.20534 0.97879 0.91109 0.94554 1.21953 0.85000 0.96864 0.94263 1.86428 1.33954 1.77796 1.40612 1.19551 0.94109 0.94256 0.99349 1.21405 0.99224 0.94308 0.99415 1.21411 0.97964 0.95260 1.00458 1.21441 0.93910 1.00631 0.99416 1.21436 0.99580 0.94892 1.00153 1.21623 0.98638 0.94640 0.98223 1.23491 0.98017 0.96284 0.99170 1.21723 1.02095 1.02624 0.94464 1.21325 0.93915 0.92678 0.96737 0.74293 0.87341 1.22957 1.21906 0.86099 0.84951 0.85095 0.73912 0.88889 0.86162 0.92710 0.92277 0.75739 0.83636 0.84443 0.85228 0.85812 0.84446 0.88932 0.92297 0.80058 0.81357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.89 12.81 -148.98 -1.91 -0.02 16 2 C -0.06 0.17 2.79 71.24 0.20 0.37 16 3 Si 0.75 -0.84 29.85 68.60 2.05 1.21 16 4 C -0.12 -0.32 5.38 -19.85 -0.11 -0.43 16 5 C -0.08 -0.60 8.40 22.27 0.19 -0.41 16 6 C -0.14 -1.39 6.24 22.40 0.14 -1.25 16 7 Br -0.05 -0.65 33.16 -20.37 -0.68 -1.32 16 8 C 0.15 0.81 6.68 22.52 0.15 0.96 16 9 O -0.30 -2.04 9.00 -73.53 -0.66 -2.70 16 10 C 0.03 -0.12 5.22 71.24 0.37 0.26 16 11 C 0.51 1.19 7.91 87.66 0.69 1.88 16 12 O -0.57 -8.25 16.10 16.01 0.26 -7.99 16 13 N -0.70 3.48 5.35 -440.05 -2.36 1.12 16 14 C 0.12 -0.28 3.89 45.52 0.18 -0.10 16 15 H 0.10 0.26 6.98 -2.39 -0.02 0.24 16 16 C -0.12 0.79 6.43 31.12 0.20 0.99 16 17 C -0.04 0.07 1.06 -52.41 -0.06 0.01 16 18 C 0.10 -0.15 6.38 71.98 0.46 0.31 16 19 O -0.58 0.00 10.04 -148.98 -1.50 -1.49 16 20 C -0.07 -0.10 5.04 -19.87 -0.10 -0.20 16 21 C -0.13 0.13 9.20 22.27 0.20 0.33 16 22 C -0.13 -0.01 10.05 22.27 0.22 0.21 16 23 C -0.14 -0.29 10.05 22.27 0.22 -0.07 16 24 C -0.14 -0.56 10.05 22.27 0.22 -0.34 16 25 C -0.11 -0.52 8.84 22.27 0.20 -0.32 16 26 C -0.13 0.04 6.99 31.12 0.22 0.26 16 27 C -0.19 0.45 9.04 22.36 0.20 0.65 16 28 C -0.03 0.05 9.68 22.26 0.22 0.27 16 29 H 0.41 -5.50 8.74 -74.06 -0.65 -6.15 16 30 H 0.11 -0.93 7.96 -2.38 -0.02 -0.95 16 31 H -0.30 -2.32 7.04 99.48 0.70 -1.62 16 32 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 33 H 0.12 1.10 4.86 -2.91 -0.01 1.08 16 34 H 0.13 -1.45 7.66 -2.39 -0.02 -1.47 16 35 H 0.13 -1.41 7.66 -2.39 -0.02 -1.42 16 36 H 0.42 -5.49 8.73 -92.70 -0.81 -6.30 16 37 H 0.09 -0.72 8.10 -2.39 -0.02 -0.74 16 38 H 0.12 -1.28 5.94 -2.39 -0.01 -1.30 16 39 H 0.05 -0.11 7.34 -2.39 -0.02 -0.13 16 40 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 41 H 0.39 -2.87 9.12 -74.06 -0.68 -3.54 16 42 H 0.15 -0.98 5.77 -2.91 -0.02 -1.00 16 43 H 0.14 -0.56 8.06 -2.91 -0.02 -0.59 16 44 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 45 H 0.12 0.21 8.06 -2.91 -0.02 0.19 16 46 H 0.14 0.79 5.44 -2.91 -0.02 0.78 16 47 H 0.09 -0.10 8.10 -2.39 -0.02 -0.12 16 48 H 0.06 0.24 8.10 -2.39 -0.02 0.22 16 49 H 0.18 -2.05 6.30 -2.91 -0.02 -2.07 16 50 H 0.17 -1.30 8.06 -2.91 -0.02 -1.33 16 Total: 0.00 -33.40 426.93 -1.83 -35.23 By element: Atomic # 1 Polarization: -26.36 SS G_CDS: -1.06 Total: -27.42 kcal Atomic # 6 Polarization: -0.64 SS G_CDS: 4.02 Total: 3.39 kcal Atomic # 7 Polarization: 3.48 SS G_CDS: -2.36 Total: 1.12 kcal Atomic # 8 Polarization: -8.39 SS G_CDS: -3.81 Total: -12.20 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: 2.05 Total: 1.21 kcal Atomic # 35 Polarization: -0.65 SS G_CDS: -0.68 Total: -1.32 kcal Total: -33.40 -1.83 -35.23 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.300 kcal (2) G-P(sol) polarization free energy of solvation -33.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.835 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds