Wall clock time and date at job start Tue Mar 9 2021 13:14:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 O 1.20754 * 120.00379 * 2 1 4 4 C 1.50702 * 119.99964 * 179.97438 * 2 1 3 5 5 H 1.09003 * 109.47093 * 35.00004 * 4 2 1 6 6 C 1.52998 * 109.47287 * 154.99793 * 4 2 1 7 7 C 1.52999 * 109.47354 * 180.02562 * 6 4 2 8 8 C 1.53001 * 109.47034 * 300.00149 * 7 6 4 9 9 H 1.09001 * 109.47481 * 299.99817 * 8 7 6 10 10 N 1.46502 * 109.47279 * 179.97438 * 8 7 6 11 11 C 1.34776 * 120.00035 * 155.00379 * 10 8 7 12 12 O 1.21288 * 120.00125 * 359.97438 * 11 10 8 13 13 C 1.50702 * 120.00084 * 180.02562 * 11 10 8 14 14 N 1.46499 * 109.47166 * 179.97438 * 13 11 10 15 15 C 1.36841 * 125.05985 * 265.21797 * 14 13 11 16 16 C 1.34238 * 109.93423 * 180.19920 * 15 14 13 17 17 C 1.50699 * 126.49817 * 179.89059 * 16 15 14 18 18 O 1.42898 * 109.46964 * 104.68316 * 17 16 15 19 19 Si 1.86301 * 109.47146 * 344.68233 * 17 16 15 20 20 C 1.46488 * 106.99930 * 359.62539 * 16 15 14 21 21 C 1.39593 * 134.02925 * 180.19727 * 20 16 15 22 22 C 1.36664 * 119.75980 * 179.97438 * 21 20 16 23 23 C 1.38781 * 120.52841 * 0.06290 * 22 21 20 24 24 C 1.37788 * 120.67191 * 359.94848 * 23 22 21 25 25 C 1.37687 * 125.06522 * 84.99550 * 14 13 11 26 26 C 1.53005 * 109.46992 * 59.99951 * 8 7 6 27 27 C 1.52999 * 109.47302 * 275.00440 * 4 2 1 28 28 H 1.08996 * 109.47238 * 240.00196 * 1 2 3 29 29 H 1.08998 * 109.46882 * 0.02562 * 1 2 3 30 30 H 1.08998 * 109.46935 * 119.99992 * 1 2 3 31 31 H 1.09003 * 109.46882 * 60.00082 * 6 4 2 32 32 H 1.08994 * 109.47468 * 300.00299 * 6 4 2 33 33 H 1.08999 * 109.47413 * 180.02562 * 7 6 4 34 34 H 1.09003 * 109.47273 * 60.00059 * 7 6 4 35 35 H 0.96993 * 119.99951 * 334.99577 * 10 8 7 36 36 H 1.08995 * 109.47080 * 59.99538 * 13 11 10 37 37 H 1.08994 * 109.46762 * 299.99902 * 13 11 10 38 38 H 1.07999 * 125.03278 * 0.07878 * 15 14 13 39 39 H 1.09002 * 109.46959 * 224.68286 * 17 16 15 40 40 H 0.96708 * 113.99549 * 180.02562 * 18 17 16 41 41 H 1.48501 * 110.00188 * 298.68222 * 19 17 16 42 42 H 1.48498 * 110.00005 * 60.00183 * 19 17 16 43 43 H 1.07998 * 120.11686 * 0.02868 * 21 20 16 44 44 H 1.07998 * 119.73209 * 180.02562 * 22 21 20 45 45 H 1.08001 * 119.66750 * 179.97438 * 23 22 21 46 46 H 1.08001 * 120.11193 * 180.02562 * 24 23 22 47 47 H 1.08994 * 109.46922 * 60.00277 * 26 8 7 48 48 H 1.09004 * 109.46767 * 179.97438 * 26 8 7 49 49 H 1.09003 * 109.46691 * 299.99810 * 27 4 2 50 50 H 1.08993 * 109.47476 * 59.99843 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1109 1.0457 0.0000 4 6 2.2605 -1.3051 0.0006 5 1 1.7131 -2.0410 -0.5885 6 6 3.6477 -1.0935 -0.6092 7 6 4.4125 -2.4186 -0.6092 8 6 4.5586 -2.9231 0.8279 9 1 5.1061 -2.1876 1.4173 10 7 5.2903 -4.1923 0.8279 11 6 5.9729 -4.5766 1.9246 12 8 5.9818 -3.8715 2.9114 13 6 6.7261 -5.8819 1.9244 14 7 7.3799 -6.0686 3.2221 15 6 8.6738 -5.7262 3.5069 16 6 8.9585 -6.0338 4.7822 17 6 10.2746 -5.8181 5.4839 18 8 10.1666 -4.6985 6.3653 19 14 11.6047 -5.4889 4.2217 20 6 7.7453 -6.6129 5.3642 21 6 7.4174 -7.1125 6.6257 22 6 6.1607 -7.5967 6.8580 23 6 5.2077 -7.5970 5.8491 24 6 5.5100 -7.1088 4.5966 25 6 6.7827 -6.6108 4.3380 26 6 3.1713 -3.1348 1.4376 27 6 2.4066 -1.8091 1.4378 28 1 -0.3633 -0.5138 0.8900 29 1 -0.3633 1.0277 -0.0005 30 1 -0.3633 -0.5138 -0.8900 31 1 4.1951 -0.3576 -0.0200 32 1 3.5436 -0.7345 -1.6330 33 1 5.4009 -2.2677 -1.0432 34 1 3.8649 -3.1541 -1.1985 35 1 5.2835 -4.7560 0.0386 36 1 7.4798 -5.8663 1.1372 37 1 6.0311 -6.7023 1.7459 38 1 9.3643 -5.2769 2.8086 39 1 10.5306 -6.7089 6.0577 40 1 10.9789 -4.5008 6.8513 41 1 11.7488 -6.6589 3.3187 42 1 11.2674 -4.2769 3.4328 43 1 8.1540 -7.1155 7.4156 44 1 5.9074 -7.9827 7.8343 45 1 4.2190 -7.9833 6.0479 46 1 4.7613 -7.1130 3.8182 47 1 2.6239 -3.8703 0.8483 48 1 3.2755 -3.4946 2.4612 49 1 2.9539 -1.0733 2.0269 50 1 1.4184 -1.9600 1.8721 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13287736_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:50 Heat of formation + Delta-G solvation = -42.846253 kcal Electronic energy + Delta-G solvation = -31811.910322 eV Core-core repulsion = 27577.998176 eV Total energy + Delta-G solvation = -4233.912146 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.49506 -41.38718 -40.52448 -38.66795 -37.92566 -37.46786 -35.37315 -34.15762 -32.34021 -31.88986 -31.30472 -30.23769 -30.11159 -28.68298 -25.76526 -24.40172 -23.98601 -23.57153 -22.53503 -21.65598 -21.37447 -20.44335 -20.34738 -18.61313 -18.26161 -18.16639 -17.67412 -17.34490 -16.89840 -16.61911 -16.34889 -16.19572 -16.01469 -15.65816 -15.44192 -15.27608 -14.93811 -14.87965 -14.71477 -14.59850 -14.48795 -14.30378 -14.03204 -13.74449 -13.55199 -13.46820 -13.45506 -13.28773 -13.08364 -12.72977 -12.63703 -12.47328 -12.42084 -12.35525 -12.32777 -11.90303 -11.70528 -11.64326 -11.48023 -11.09051 -10.51502 -10.41452 -10.22766 -10.09399 -9.03265 -8.54152 -4.96625 0.26143 0.78668 0.93858 1.36071 1.37522 1.40020 1.66366 1.75684 2.02804 2.07506 2.93654 3.09303 3.38352 3.42841 3.48600 3.51860 3.67113 3.75500 3.79192 3.81887 3.85168 3.90824 3.98153 4.09753 4.13143 4.15321 4.23358 4.28892 4.31058 4.36018 4.36881 4.43587 4.45397 4.50497 4.61723 4.69798 4.77501 4.81390 4.85927 4.88351 4.89648 4.98024 4.99105 5.05638 5.09062 5.18186 5.24492 5.32253 5.63558 5.79235 5.84777 5.88530 6.14175 6.29991 6.36405 6.49591 6.83741 7.01608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.357 3.643 3 O -0.453 6.453 4 C -0.139 4.139 5 H 0.099 0.901 6 C -0.105 4.105 7 C -0.124 4.124 8 C 0.144 3.856 9 H 0.090 0.910 10 N -0.726 5.726 11 C 0.490 3.510 12 O -0.509 6.509 13 C 0.091 3.909 14 N -0.466 5.466 15 C 0.065 3.935 16 C -0.151 4.151 17 C -0.033 4.033 18 O -0.545 6.545 19 Si 0.682 3.318 20 C -0.085 4.085 21 C -0.063 4.063 22 C -0.145 4.145 23 C -0.096 4.096 24 C -0.127 4.127 25 C 0.109 3.891 26 C -0.126 4.126 27 C -0.104 4.104 28 H 0.093 0.907 29 H 0.082 0.918 30 H 0.093 0.907 31 H 0.076 0.924 32 H 0.072 0.928 33 H 0.074 0.926 34 H 0.071 0.929 35 H 0.401 0.599 36 H 0.120 0.880 37 H 0.119 0.881 38 H 0.162 0.838 39 H 0.070 0.930 40 H 0.377 0.623 41 H -0.256 1.256 42 H -0.254 1.254 43 H 0.123 0.877 44 H 0.124 0.876 45 H 0.126 0.874 46 H 0.115 0.885 47 H 0.068 0.932 48 H 0.073 0.927 49 H 0.071 0.929 50 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.390 -4.958 -4.084 6.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.264 4.264 2 C 0.232 3.768 3 O -0.326 6.326 4 C -0.158 4.158 5 H 0.117 0.883 6 C -0.143 4.143 7 C -0.162 4.162 8 C 0.040 3.960 9 H 0.108 0.892 10 N -0.379 5.379 11 C 0.274 3.726 12 O -0.382 6.382 13 C -0.035 4.035 14 N -0.149 5.149 15 C -0.060 4.060 16 C -0.158 4.158 17 C -0.144 4.144 18 O -0.351 6.351 19 Si 0.583 3.417 20 C -0.089 4.089 21 C -0.082 4.082 22 C -0.164 4.164 23 C -0.115 4.115 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.164 4.164 27 C -0.142 4.142 28 H 0.112 0.888 29 H 0.101 0.899 30 H 0.111 0.889 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.235 0.765 36 H 0.138 0.862 37 H 0.137 0.863 38 H 0.179 0.821 39 H 0.088 0.912 40 H 0.224 0.776 41 H -0.181 1.181 42 H -0.179 1.179 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.144 0.856 46 H 0.133 0.867 47 H 0.087 0.913 48 H 0.091 0.909 49 H 0.090 0.910 50 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -0.587 -3.741 -4.757 6.080 hybrid contribution -0.739 -0.517 -0.485 1.024 sum -1.326 -4.258 -5.242 6.882 Atomic orbital electron populations 1.22356 0.94215 1.05222 1.04615 1.24641 0.92056 0.89969 0.70108 1.90434 1.72055 1.35066 1.35006 1.21834 0.97685 0.97230 0.99079 0.88281 1.21385 0.94095 0.97043 1.01790 1.21800 1.01417 0.97731 0.95270 1.21062 0.92399 0.85317 0.97255 0.89158 1.46029 1.52120 1.23457 1.16253 1.20998 0.79839 0.88164 0.83617 1.90836 1.60763 1.53944 1.32703 1.21595 0.99187 0.97104 0.85614 1.43161 1.09701 1.53173 1.08854 1.21407 0.85465 1.01824 0.97309 1.19536 0.94476 1.08741 0.93088 1.23937 0.99417 0.91453 0.99587 1.86578 1.39992 1.48706 1.59788 0.95280 0.85317 0.80637 0.80425 1.18928 0.92703 1.03535 0.93767 1.20286 0.96633 0.96577 0.94674 1.20668 0.93497 1.02787 0.99497 1.20824 0.99421 0.99138 0.92139 1.19945 0.93109 1.03571 0.98141 1.18167 0.94792 1.00281 0.86253 1.21897 0.95066 0.97345 1.02127 1.21407 1.01320 0.97338 0.94125 0.88828 0.89870 0.88865 0.90486 0.90916 0.90767 0.91004 0.76466 0.86162 0.86303 0.82098 0.91241 0.77562 1.18067 1.17909 0.85875 0.85805 0.85643 0.86704 0.91287 0.90866 0.90990 0.90686 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 0.47 10.26 36.01 0.37 0.84 16 2 C 0.36 0.10 6.38 -29.03 -0.19 -0.08 16 3 O -0.45 -2.06 16.82 6.00 0.10 -1.96 16 4 C -0.14 0.24 2.45 -91.77 -0.22 0.02 16 5 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 6 C -0.11 0.11 4.74 -26.73 -0.13 -0.02 16 7 C -0.12 0.32 5.39 -26.73 -0.14 0.18 16 8 C 0.14 -0.13 2.46 -67.93 -0.17 -0.29 16 9 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 10 N -0.73 1.43 5.08 -53.80 -0.27 1.15 16 11 C 0.49 0.58 7.86 -10.98 -0.09 0.50 16 12 O -0.51 -3.36 16.09 5.55 0.09 -3.27 16 13 C 0.09 -0.09 6.48 -5.19 -0.03 -0.13 16 14 N -0.47 -1.49 2.27 -115.71 -0.26 -1.75 16 15 C 0.06 0.25 9.89 -16.73 -0.17 0.09 16 16 C -0.15 -0.72 5.61 -102.71 -0.58 -1.30 16 17 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 18 O -0.55 -1.42 12.86 -35.23 -0.45 -1.87 16 19 Si 0.68 -0.13 30.80 -169.99 -5.24 -5.36 16 20 C -0.09 -0.48 6.35 -105.14 -0.67 -1.15 16 21 C -0.06 -0.27 10.05 -39.64 -0.40 -0.67 16 22 C -0.15 -0.44 9.97 -39.95 -0.40 -0.83 16 23 C -0.10 -0.25 10.01 -39.55 -0.40 -0.65 16 24 C -0.13 -0.42 10.00 -39.43 -0.39 -0.81 16 25 C 0.11 0.52 6.80 -83.99 -0.57 -0.05 16 26 C -0.13 0.14 5.50 -26.70 -0.15 -0.01 16 27 C -0.10 0.13 5.19 -26.71 -0.14 -0.01 16 28 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 29 H 0.08 -0.10 8.12 -51.93 -0.42 -0.53 16 30 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.08 0.08 7.87 -51.93 -0.41 -0.33 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.40 -2.11 8.60 -40.82 -0.35 -2.46 16 36 H 0.12 -0.49 8.12 -51.93 -0.42 -0.91 16 37 H 0.12 -0.43 8.14 -51.93 -0.42 -0.86 16 38 H 0.16 0.33 6.30 -52.49 -0.33 0.00 16 39 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 40 H 0.38 -1.09 8.74 45.56 0.40 -0.70 16 41 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 42 H -0.25 -0.70 7.04 56.52 0.40 -0.30 16 43 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 44 H 0.12 0.10 8.06 -52.49 -0.42 -0.33 16 45 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 46 H 0.11 0.13 8.06 -52.49 -0.42 -0.29 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 49 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 50 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 411.56 15.07 6.20 6.20 Total: 0.00 -13.06 411.56 -12.06 -25.12 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -7.89 Total: -13.94 kcal Atomic # 6 Polarization: 0.01 SS G_CDS: -4.34 Total: -4.33 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.54 Total: -0.60 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -0.26 Total: -7.09 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.24 Total: -5.36 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -13.06 -12.06 -25.12 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13287736_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.729 kcal (2) G-P(sol) polarization free energy of solvation -13.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.059 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds