Wall clock time and date at job start Tue Mar 9 2021 12:54:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47126 * 2 1 4 4 C 1.50697 * 109.47104 * 119.99725 * 2 1 3 5 5 C 1.38240 * 119.93948 * 65.00486 * 4 2 1 6 6 C 1.38187 * 120.07400 * 179.97438 * 5 4 2 7 7 C 1.38684 * 119.95208 * 0.02562 * 6 5 4 8 8 O 1.35914 * 120.05531 * 179.97438 * 7 6 5 9 9 C 1.42902 * 117.00186 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47038 * 179.97438 * 9 8 7 11 11 O 1.21289 * 120.00209 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00256 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00248 * 180.02562 * 12 10 9 14 14 H 1.09001 * 109.47430 * 34.99083 * 13 12 10 15 15 C 1.52993 * 109.47622 * 154.99721 * 13 12 10 16 16 C 1.52989 * 109.47704 * 179.97438 * 15 13 12 17 17 C 1.53009 * 109.47113 * 299.99949 * 16 15 13 18 18 H 1.09001 * 109.46642 * 299.99845 * 17 16 15 19 19 C 1.52999 * 109.46984 * 179.97438 * 17 16 15 20 20 C 1.53006 * 109.46623 * 174.99905 * 19 17 16 21 21 O 1.42906 * 109.46752 * 179.97438 * 20 19 17 22 22 C 1.53002 * 109.46714 * 59.99678 * 17 16 15 23 23 C 1.52989 * 109.47252 * 299.99863 * 22 17 16 24 24 C 1.38832 * 119.88244 * 0.25555 * 7 6 5 25 25 Br 1.89097 * 120.03589 * 179.72517 * 24 7 6 26 26 C 1.38199 * 119.92675 * 359.49178 * 24 7 6 27 27 H 0.96698 * 113.99756 * 59.99426 * 1 2 3 28 28 H 1.08994 * 109.47305 * 240.00248 * 2 1 3 29 29 H 1.48503 * 110.00338 * 60.00186 * 3 2 1 30 30 H 1.48500 * 110.00067 * 181.31925 * 3 2 1 31 31 H 1.08000 * 119.96547 * 359.97438 * 5 4 2 32 32 H 1.07995 * 120.02435 * 179.97438 * 6 5 4 33 33 H 1.08999 * 109.47338 * 60.00266 * 9 8 7 34 34 H 1.08993 * 109.47238 * 299.99398 * 9 8 7 35 35 H 0.96995 * 119.99663 * 359.97438 * 12 10 9 36 36 H 1.09001 * 109.47239 * 59.99245 * 15 13 12 37 37 H 1.09007 * 109.46997 * 300.00319 * 15 13 12 38 38 H 1.08999 * 109.47464 * 179.97438 * 16 15 13 39 39 H 1.09001 * 109.47240 * 59.99427 * 16 15 13 40 40 H 1.09000 * 109.47486 * 55.00077 * 19 17 16 41 41 H 1.09001 * 109.47362 * 294.99354 * 19 17 16 42 42 H 1.08993 * 109.46955 * 300.00075 * 20 19 17 43 43 H 1.09000 * 109.47050 * 59.99904 * 20 19 17 44 44 H 0.96698 * 113.99404 * 180.02562 * 21 20 19 45 45 H 1.08993 * 109.47092 * 60.00621 * 22 17 16 46 46 H 1.09006 * 109.46455 * 179.97438 * 22 17 16 47 47 H 1.08993 * 109.47691 * 300.00392 * 23 22 17 48 48 H 1.08997 * 109.47364 * 179.97438 * 23 22 17 49 49 H 1.07997 * 119.97261 * 180.23638 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6840 -2.0602 1.3971 6 6 2.1438 -2.7144 2.5241 7 6 2.8536 -2.0157 3.4892 8 8 3.3063 -2.6570 4.5987 9 6 3.0155 -4.0520 4.7058 10 6 3.5923 -4.5882 5.9907 11 8 4.1938 -3.8486 6.7406 12 7 3.4408 -5.8897 6.3061 13 6 4.0011 -6.4108 7.5553 14 1 3.9315 -5.6480 8.3308 15 6 3.2167 -7.6510 7.9880 16 6 3.8022 -8.1955 9.2924 17 6 5.2697 -8.5704 9.0753 18 1 5.3390 -9.3330 8.2997 19 6 5.8554 -9.1143 10.3799 20 6 7.2835 -9.6047 10.1323 21 8 7.8308 -10.1123 11.3510 22 6 6.0542 -7.3301 8.6427 23 6 5.4686 -6.7856 7.3383 24 6 3.0958 -0.6589 3.3227 25 35 4.0564 0.2997 4.6395 26 6 2.6382 -0.0106 2.1912 27 1 -0.3933 0.4418 -0.7650 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4680 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 1.1309 -2.6041 0.6457 32 1 1.9498 -3.7689 2.6537 33 1 3.4568 -4.5812 3.8613 34 1 1.9356 -4.1993 4.7028 35 1 2.9602 -6.4813 5.7062 36 1 3.2863 -8.4138 7.2125 37 1 2.1711 -7.3841 8.1422 38 1 3.2431 -9.0789 9.6008 39 1 3.7330 -7.4329 10.0680 40 1 5.2432 -9.9431 10.7354 41 1 5.8678 -8.3237 11.1302 42 1 7.2712 -10.3952 9.3821 43 1 7.8957 -8.7759 9.7768 44 1 8.7364 -10.4409 11.2684 45 1 5.9849 -6.5675 9.4183 46 1 7.0998 -7.5970 8.4885 47 1 5.5379 -7.5482 6.5627 48 1 6.0272 -5.9018 7.0303 49 1 2.8295 1.0441 2.0591 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13461142_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:10 Heat of formation + Delta-G solvation = -133.473184 kcal Electronic energy + Delta-G solvation = -30449.205934 eV Core-core repulsion = 26002.968047 eV Total energy + Delta-G solvation = -4446.237887 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.75473 -41.02176 -39.80157 -38.97089 -37.77533 -37.33131 -35.74123 -33.56838 -32.99875 -32.28757 -31.91979 -30.55261 -29.83243 -28.16230 -26.35671 -24.62549 -24.11205 -23.61405 -22.33547 -21.86219 -21.61673 -20.91167 -19.63189 -18.64937 -18.44508 -18.29024 -17.59401 -17.37261 -17.16355 -16.73452 -16.50943 -16.21785 -15.89285 -15.56722 -15.40519 -15.24107 -15.09503 -14.96464 -14.69409 -14.56805 -14.25476 -14.05953 -13.90128 -13.79375 -13.67489 -13.51780 -13.24854 -12.96654 -12.52846 -12.31719 -12.26604 -12.23027 -12.18751 -12.04213 -12.02005 -11.79377 -11.77196 -11.43436 -11.25702 -11.07955 -10.87224 -10.84965 -10.41310 -10.16095 -10.03521 -9.32633 -5.04355 -0.08922 0.01664 0.67566 1.20723 1.31135 1.46301 1.59221 1.92160 2.30248 2.40009 3.13742 3.24345 3.35098 3.52237 3.54557 3.59613 3.66188 3.70937 3.79267 3.83955 3.86402 3.91373 3.96004 4.06071 4.18151 4.22158 4.23145 4.24717 4.33288 4.38314 4.44212 4.45656 4.51872 4.52376 4.65332 4.71197 4.84195 4.90892 4.92207 4.93242 5.04498 5.09976 5.10233 5.13137 5.21268 5.26404 5.32670 5.36480 5.43072 5.95985 6.31147 6.53420 6.66018 7.07187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.064 4.064 3 Si 0.674 3.326 4 C -0.107 4.107 5 C -0.032 4.032 6 C -0.203 4.203 7 C 0.162 3.838 8 O -0.273 6.273 9 C 0.036 3.964 10 C 0.516 3.484 11 O -0.506 6.506 12 N -0.725 5.725 13 C 0.147 3.853 14 H 0.091 0.909 15 C -0.126 4.126 16 C -0.110 4.110 17 C -0.086 4.086 18 H 0.074 0.926 19 C -0.117 4.117 20 C 0.073 3.927 21 O -0.577 6.577 22 C -0.116 4.116 23 C -0.130 4.130 24 C -0.118 4.118 25 Br -0.023 7.023 26 C -0.055 4.055 27 H 0.384 0.616 28 H 0.077 0.923 29 H -0.247 1.247 30 H -0.251 1.251 31 H 0.139 0.861 32 H 0.142 0.858 33 H 0.097 0.903 34 H 0.097 0.903 35 H 0.401 0.599 36 H 0.070 0.930 37 H 0.072 0.928 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.044 0.956 43 H 0.048 0.952 44 H 0.381 0.619 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.065 0.935 48 H 0.069 0.931 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.553 -4.693 -7.198 8.964 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.175 4.175 3 Si 0.575 3.425 4 C -0.108 4.108 5 C -0.050 4.050 6 C -0.222 4.222 7 C 0.113 3.887 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.300 3.700 11 O -0.379 6.379 12 N -0.378 5.378 13 C 0.043 3.957 14 H 0.109 0.891 15 C -0.164 4.164 16 C -0.148 4.148 17 C -0.105 4.105 18 H 0.092 0.908 19 C -0.154 4.154 20 C -0.005 4.005 21 O -0.382 6.382 22 C -0.154 4.154 23 C -0.168 4.168 24 C -0.198 4.198 25 Br 0.062 6.938 26 C -0.075 4.075 27 H 0.232 0.768 28 H 0.095 0.905 29 H -0.171 1.171 30 H -0.175 1.175 31 H 0.157 0.843 32 H 0.159 0.841 33 H 0.115 0.885 34 H 0.115 0.885 35 H 0.235 0.765 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.089 0.911 41 H 0.090 0.910 42 H 0.062 0.938 43 H 0.066 0.934 44 H 0.228 0.772 45 H 0.087 0.913 46 H 0.086 0.914 47 H 0.084 0.916 48 H 0.088 0.912 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.643 -3.225 -4.757 5.977 hybrid contribution 0.055 -1.419 -0.885 1.673 sum -1.589 -4.644 -5.642 7.478 Atomic orbital electron populations 1.86486 1.17069 1.81800 1.49846 1.24536 0.85812 1.10228 0.96920 0.95341 0.81226 0.78267 0.87686 1.19225 1.01192 0.94374 0.96044 1.20933 0.94620 0.93292 0.96188 1.21291 1.04095 1.00997 0.95863 1.18595 0.93057 0.90581 0.86446 1.86280 1.72766 1.21522 1.37884 1.22574 1.02016 0.81745 0.97895 1.19937 0.80572 0.82445 0.87040 1.90811 1.39653 1.56906 1.50492 1.45904 1.58535 1.09227 1.24166 1.21066 0.92794 0.96095 0.85726 0.89080 1.21804 0.99623 0.96465 0.98463 1.21513 0.95011 1.01426 0.96874 1.21150 0.94868 0.97468 0.96977 0.90788 1.21563 0.94635 1.01464 0.97776 1.22273 0.94979 0.97074 0.86174 1.86476 1.34043 1.83672 1.34052 1.21639 0.99353 0.97210 0.97152 1.21925 0.95348 1.01388 0.98160 1.20923 1.08367 0.92499 0.98026 1.96803 1.72540 1.72836 1.51576 1.20731 0.96204 0.99145 0.91385 0.76836 0.90468 1.17116 1.17531 0.84301 0.84081 0.88510 0.88483 0.76475 0.91159 0.90980 0.91003 0.91273 0.91054 0.91004 0.93772 0.93408 0.77231 0.91331 0.91353 0.91648 0.91216 0.84805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.33 12.81 -35.23 -0.45 -0.12 16 2 C -0.06 0.05 2.79 36.00 0.10 0.15 16 3 Si 0.67 -0.69 29.85 -169.99 -5.07 -5.76 16 4 C -0.11 -0.19 5.38 -104.60 -0.56 -0.75 16 5 C -0.03 -0.01 9.68 -39.60 -0.38 -0.40 16 6 C -0.20 -0.04 9.04 -39.44 -0.36 -0.40 16 7 C 0.16 0.46 6.68 -39.20 -0.26 0.20 16 8 O -0.27 -0.93 9.01 -39.38 -0.35 -1.28 16 9 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 10 C 0.52 0.72 7.87 -10.99 -0.09 0.63 16 11 O -0.51 -3.27 16.16 -14.36 -0.23 -3.50 16 12 N -0.72 1.29 5.08 -53.80 -0.27 1.01 16 13 C 0.15 -0.14 2.45 -67.93 -0.17 -0.30 16 14 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 15 C -0.13 0.34 5.39 -26.74 -0.14 0.20 16 16 C -0.11 0.23 5.20 -26.73 -0.14 0.09 16 17 C -0.09 0.15 2.19 -90.61 -0.20 -0.04 16 18 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 19 C -0.12 0.05 5.05 -26.73 -0.14 -0.08 16 20 C 0.07 -0.03 6.80 37.16 0.25 0.23 16 21 O -0.58 -0.77 13.66 -35.23 -0.48 -1.25 16 22 C -0.12 0.12 4.96 -26.74 -0.13 -0.01 16 23 C -0.13 0.09 5.49 -26.73 -0.15 -0.06 16 24 C -0.12 -0.49 6.24 -39.38 -0.25 -0.74 16 25 Br -0.02 -0.12 33.16 -68.01 -2.26 -2.37 16 26 C -0.06 -0.18 8.40 -39.58 -0.33 -0.51 16 27 H 0.38 -2.14 8.74 45.56 0.40 -1.74 16 28 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 29 H -0.25 -0.57 7.05 56.52 0.40 -0.17 16 30 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 31 H 0.14 -0.22 8.06 -52.49 -0.42 -0.64 16 32 H 0.14 -0.44 6.30 -52.49 -0.33 -0.77 16 33 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 34 H 0.10 -0.34 7.66 -51.93 -0.40 -0.73 16 35 H 0.40 -2.02 8.60 -40.82 -0.35 -2.37 16 36 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 37 H 0.07 -0.20 8.14 -51.92 -0.42 -0.63 16 38 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 42 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.05 -0.05 6.56 -51.93 -0.34 -0.39 16 44 H 0.38 -1.10 9.12 45.56 0.42 -0.68 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.07 -0.08 6.56 -51.93 -0.34 -0.42 16 47 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 48 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 49 H 0.13 0.40 4.86 -52.49 -0.26 0.15 16 LS Contribution 411.95 15.07 6.21 6.21 Total: 0.00 -11.30 411.95 -12.35 -23.65 By element: Atomic # 1 Polarization: -8.27 SS G_CDS: -6.68 Total: -14.95 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -2.75 Total: -1.64 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -0.27 Total: 1.01 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: -1.52 Total: -6.15 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.07 Total: -5.76 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -2.26 Total: -2.37 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -11.30 -12.35 -23.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.827 kcal (2) G-P(sol) polarization free energy of solvation -11.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.646 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds