Wall clock time and date at job start Tue Mar 9 2021 12:54:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47126 * 2 1 4 4 C 1.50697 * 109.47104 * 119.99725 * 2 1 3 5 5 C 1.38240 * 119.93948 * 65.00486 * 4 2 1 6 6 C 1.38187 * 120.07400 * 179.97438 * 5 4 2 7 7 C 1.38684 * 119.95208 * 0.02562 * 6 5 4 8 8 O 1.35914 * 120.05531 * 179.97438 * 7 6 5 9 9 C 1.42902 * 117.00186 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47038 * 179.97438 * 9 8 7 11 11 O 1.21289 * 120.00209 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00256 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00248 * 180.02562 * 12 10 9 14 14 H 1.09001 * 109.47430 * 34.99083 * 13 12 10 15 15 C 1.52993 * 109.47622 * 154.99721 * 13 12 10 16 16 C 1.52989 * 109.47704 * 179.97438 * 15 13 12 17 17 C 1.53009 * 109.47113 * 299.99949 * 16 15 13 18 18 H 1.09001 * 109.46642 * 299.99845 * 17 16 15 19 19 C 1.52999 * 109.46984 * 179.97438 * 17 16 15 20 20 C 1.53006 * 109.46623 * 174.99905 * 19 17 16 21 21 O 1.42906 * 109.46752 * 179.97438 * 20 19 17 22 22 C 1.53002 * 109.46714 * 59.99678 * 17 16 15 23 23 C 1.52989 * 109.47252 * 299.99863 * 22 17 16 24 24 C 1.38832 * 119.88244 * 0.25555 * 7 6 5 25 25 Br 1.89097 * 120.03589 * 179.72517 * 24 7 6 26 26 C 1.38199 * 119.92675 * 359.49178 * 24 7 6 27 27 H 0.96698 * 113.99756 * 59.99426 * 1 2 3 28 28 H 1.08994 * 109.47305 * 240.00248 * 2 1 3 29 29 H 1.48503 * 110.00338 * 60.00186 * 3 2 1 30 30 H 1.48500 * 110.00067 * 181.31925 * 3 2 1 31 31 H 1.08000 * 119.96547 * 359.97438 * 5 4 2 32 32 H 1.07995 * 120.02435 * 179.97438 * 6 5 4 33 33 H 1.08999 * 109.47338 * 60.00266 * 9 8 7 34 34 H 1.08993 * 109.47238 * 299.99398 * 9 8 7 35 35 H 0.96995 * 119.99663 * 359.97438 * 12 10 9 36 36 H 1.09001 * 109.47239 * 59.99245 * 15 13 12 37 37 H 1.09007 * 109.46997 * 300.00319 * 15 13 12 38 38 H 1.08999 * 109.47464 * 179.97438 * 16 15 13 39 39 H 1.09001 * 109.47240 * 59.99427 * 16 15 13 40 40 H 1.09000 * 109.47486 * 55.00077 * 19 17 16 41 41 H 1.09001 * 109.47362 * 294.99354 * 19 17 16 42 42 H 1.08993 * 109.46955 * 300.00075 * 20 19 17 43 43 H 1.09000 * 109.47050 * 59.99904 * 20 19 17 44 44 H 0.96698 * 113.99404 * 180.02562 * 21 20 19 45 45 H 1.08993 * 109.47092 * 60.00621 * 22 17 16 46 46 H 1.09006 * 109.46455 * 179.97438 * 22 17 16 47 47 H 1.08993 * 109.47691 * 300.00392 * 23 22 17 48 48 H 1.08997 * 109.47364 * 179.97438 * 23 22 17 49 49 H 1.07997 * 119.97261 * 180.23638 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6840 -2.0602 1.3971 6 6 2.1438 -2.7144 2.5241 7 6 2.8536 -2.0157 3.4892 8 8 3.3063 -2.6570 4.5987 9 6 3.0155 -4.0520 4.7058 10 6 3.5923 -4.5882 5.9907 11 8 4.1938 -3.8486 6.7406 12 7 3.4408 -5.8897 6.3061 13 6 4.0011 -6.4108 7.5553 14 1 3.9315 -5.6480 8.3308 15 6 3.2167 -7.6510 7.9880 16 6 3.8022 -8.1955 9.2924 17 6 5.2697 -8.5704 9.0753 18 1 5.3390 -9.3330 8.2997 19 6 5.8554 -9.1143 10.3799 20 6 7.2835 -9.6047 10.1323 21 8 7.8308 -10.1123 11.3510 22 6 6.0542 -7.3301 8.6427 23 6 5.4686 -6.7856 7.3383 24 6 3.0958 -0.6589 3.3227 25 35 4.0564 0.2997 4.6395 26 6 2.6382 -0.0106 2.1912 27 1 -0.3933 0.4418 -0.7650 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4680 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 1.1309 -2.6041 0.6457 32 1 1.9498 -3.7689 2.6537 33 1 3.4568 -4.5812 3.8613 34 1 1.9356 -4.1993 4.7028 35 1 2.9602 -6.4813 5.7062 36 1 3.2863 -8.4138 7.2125 37 1 2.1711 -7.3841 8.1422 38 1 3.2431 -9.0789 9.6008 39 1 3.7330 -7.4329 10.0680 40 1 5.2432 -9.9431 10.7354 41 1 5.8678 -8.3237 11.1302 42 1 7.2712 -10.3952 9.3821 43 1 7.8957 -8.7759 9.7768 44 1 8.7364 -10.4409 11.2684 45 1 5.9849 -6.5675 9.4183 46 1 7.0998 -7.5970 8.4885 47 1 5.5379 -7.5482 6.5627 48 1 6.0272 -5.9018 7.0303 49 1 2.8295 1.0441 2.0591 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13461142_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:09 Heat of formation + Delta-G solvation = -136.793930 kcal Electronic energy + Delta-G solvation = -30449.349933 eV Core-core repulsion = 26002.968047 eV Total energy + Delta-G solvation = -4446.381886 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.80933 -41.04463 -39.79520 -39.01046 -37.78417 -37.27082 -35.78001 -33.69097 -33.00077 -32.30721 -31.82347 -30.66736 -29.86480 -28.10282 -26.33304 -24.59515 -24.12160 -23.57028 -22.36977 -21.80200 -21.64441 -20.83328 -19.66614 -18.63497 -18.36703 -18.26822 -17.58376 -17.40518 -17.19505 -16.72830 -16.47153 -16.26060 -15.89223 -15.62426 -15.37364 -15.21903 -15.04312 -14.95098 -14.68834 -14.57441 -14.33886 -14.10276 -13.88855 -13.74252 -13.72602 -13.47076 -13.17446 -12.93764 -12.56824 -12.34361 -12.24542 -12.20150 -12.15807 -12.13059 -11.97928 -11.88816 -11.73428 -11.38148 -11.35158 -11.20603 -10.95226 -10.83723 -10.31768 -10.15956 -10.15146 -9.42932 -5.01560 -0.18600 -0.05602 0.45965 1.27186 1.33458 1.41569 1.58670 1.94655 2.25558 2.42796 3.24486 3.26933 3.41839 3.56542 3.61401 3.69242 3.74176 3.79290 3.92771 3.95945 3.97446 3.98750 4.02485 4.16089 4.19393 4.24744 4.30407 4.33056 4.39143 4.49247 4.53076 4.54955 4.58540 4.58884 4.67079 4.75237 4.90417 4.91838 5.01263 5.05828 5.12625 5.14009 5.17523 5.17794 5.21071 5.32700 5.36573 5.40896 5.51926 5.96004 6.43067 6.83999 6.92496 7.11665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.058 4.058 3 Si 0.750 3.250 4 C -0.120 4.120 5 C -0.028 4.028 6 C -0.190 4.190 7 C 0.150 3.850 8 O -0.304 6.304 9 C 0.032 3.968 10 C 0.511 3.489 11 O -0.569 6.569 12 N -0.705 5.705 13 C 0.147 3.853 14 H 0.058 0.942 15 C -0.115 4.115 16 C -0.112 4.112 17 C -0.076 4.076 18 H 0.089 0.911 19 C -0.117 4.117 20 C 0.069 3.931 21 O -0.602 6.602 22 C -0.114 4.114 23 C -0.123 4.123 24 C -0.142 4.142 25 Br -0.051 7.051 26 C -0.076 4.076 27 H 0.406 0.594 28 H 0.109 0.891 29 H -0.302 1.302 30 H -0.291 1.291 31 H 0.169 0.831 32 H 0.182 0.818 33 H 0.133 0.867 34 H 0.131 0.869 35 H 0.422 0.578 36 H 0.092 0.908 37 H 0.077 0.923 38 H 0.081 0.919 39 H 0.055 0.945 40 H 0.068 0.932 41 H 0.055 0.945 42 H 0.058 0.942 43 H 0.051 0.949 44 H 0.396 0.604 45 H 0.050 0.950 46 H 0.071 0.929 47 H 0.083 0.917 48 H 0.041 0.959 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.365 -7.826 -9.883 13.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.170 4.170 3 Si 0.659 3.341 4 C -0.121 4.121 5 C -0.046 4.046 6 C -0.209 4.209 7 C 0.102 3.898 8 O -0.217 6.217 9 C -0.045 4.045 10 C 0.297 3.703 11 O -0.447 6.447 12 N -0.359 5.359 13 C 0.042 3.958 14 H 0.077 0.923 15 C -0.153 4.153 16 C -0.150 4.150 17 C -0.095 4.095 18 H 0.107 0.893 19 C -0.154 4.154 20 C -0.008 4.008 21 O -0.411 6.411 22 C -0.152 4.152 23 C -0.162 4.162 24 C -0.222 4.222 25 Br 0.034 6.966 26 C -0.096 4.096 27 H 0.257 0.743 28 H 0.127 0.873 29 H -0.230 1.230 30 H -0.219 1.219 31 H 0.187 0.813 32 H 0.199 0.801 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.260 0.740 36 H 0.111 0.889 37 H 0.096 0.904 38 H 0.100 0.900 39 H 0.073 0.927 40 H 0.087 0.913 41 H 0.074 0.926 42 H 0.076 0.924 43 H 0.070 0.930 44 H 0.246 0.754 45 H 0.068 0.932 46 H 0.089 0.911 47 H 0.102 0.898 48 H 0.060 0.940 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -3.488 -6.405 -7.503 10.464 hybrid contribution 0.633 -0.446 -0.001 0.774 sum -2.855 -6.851 -7.504 10.554 Atomic orbital electron populations 1.86432 1.16709 1.82238 1.51661 1.24458 0.86137 1.09356 0.97020 0.94707 0.77668 0.76947 0.84824 1.19612 1.00736 0.95451 0.96347 1.21328 0.93915 0.92664 0.96722 1.21722 1.02053 1.02639 0.94483 1.18753 0.93716 0.90182 0.87114 1.86243 1.73332 1.23698 1.38395 1.22891 1.04072 0.80118 0.97465 1.20497 0.79655 0.82805 0.87340 1.90792 1.42678 1.58609 1.52636 1.45750 1.57570 1.08612 1.23968 1.21001 0.93275 0.96120 0.85371 0.92322 1.21744 0.99310 0.95722 0.98550 1.21529 0.94983 1.01441 0.97021 1.21075 0.94721 0.97074 0.96583 0.89273 1.21565 0.94968 1.00817 0.98080 1.22373 0.94838 0.97641 0.85972 1.86431 1.35521 1.83936 1.35176 1.21611 0.99805 0.97229 0.96555 1.21850 0.95051 1.00631 0.98659 1.21073 1.09625 0.93506 0.98045 1.96743 1.73354 1.73661 1.52858 1.20771 0.97664 0.98926 0.92196 0.74278 0.87297 1.23023 1.21881 0.81306 0.80065 0.84970 0.85174 0.74041 0.88931 0.90421 0.90019 0.92666 0.91321 0.92650 0.92384 0.93040 0.75435 0.93161 0.91059 0.89791 0.94023 0.86101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.87 12.81 -148.98 -1.91 -0.03 16 2 C -0.06 0.17 2.79 71.23 0.20 0.37 16 3 Si 0.75 -0.81 29.85 68.60 2.05 1.23 16 4 C -0.12 -0.33 5.38 -19.85 -0.11 -0.43 16 5 C -0.03 0.05 9.68 22.26 0.22 0.27 16 6 C -0.19 0.42 9.04 22.36 0.20 0.62 16 7 C 0.15 0.85 6.68 22.52 0.15 1.00 16 8 O -0.30 -2.19 9.01 -73.54 -0.66 -2.85 16 9 C 0.03 -0.11 5.22 71.24 0.37 0.27 16 10 C 0.51 1.56 7.87 87.66 0.69 2.25 16 11 O -0.57 -8.86 16.16 15.98 0.26 -8.60 16 12 N -0.71 3.11 5.08 -442.53 -2.25 0.86 16 13 C 0.15 -0.22 2.45 44.99 0.11 -0.11 16 14 H 0.06 0.32 7.58 -2.39 -0.02 0.30 16 15 C -0.12 0.78 5.39 30.59 0.16 0.95 16 16 C -0.11 0.51 5.20 30.59 0.16 0.67 16 17 C -0.08 0.30 2.19 -10.79 -0.02 0.27 16 18 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 19 C -0.12 0.05 5.05 30.60 0.15 0.21 16 20 C 0.07 -0.05 6.80 71.98 0.49 0.44 16 21 O -0.60 -1.79 13.66 -148.98 -2.04 -3.83 16 22 C -0.11 0.13 4.96 30.59 0.15 0.29 16 23 C -0.12 0.11 5.49 30.59 0.17 0.28 16 24 C -0.14 -1.43 6.24 22.40 0.14 -1.29 16 25 Br -0.05 -0.67 33.16 -20.37 -0.68 -1.35 16 26 C -0.08 -0.61 8.40 22.27 0.19 -0.43 16 27 H 0.41 -5.51 8.74 -74.06 -0.65 -6.15 16 28 H 0.11 -0.95 7.96 -2.39 -0.02 -0.97 16 29 H -0.30 -2.37 7.05 99.48 0.70 -1.67 16 30 H -0.29 -1.55 7.11 99.48 0.71 -0.85 16 31 H 0.17 -1.32 8.06 -2.91 -0.02 -1.34 16 32 H 0.18 -2.02 6.30 -2.91 -0.02 -2.04 16 33 H 0.13 -1.41 7.66 -2.39 -0.02 -1.43 16 34 H 0.13 -1.33 7.66 -2.39 -0.02 -1.35 16 35 H 0.42 -5.38 8.60 -92.71 -0.80 -6.18 16 36 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 37 H 0.08 -0.56 8.14 -2.38 -0.02 -0.58 16 38 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 39 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 41 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 42 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 43 H 0.05 -0.09 6.56 -2.39 -0.02 -0.11 16 44 H 0.40 -2.21 9.12 -74.06 -0.68 -2.89 16 45 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 46 H 0.07 -0.13 6.56 -2.38 -0.02 -0.15 16 47 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 48 H 0.04 0.21 8.14 -2.39 -0.02 0.20 16 49 H 0.12 1.12 4.86 -2.91 -0.01 1.10 16 Total: 0.00 -32.74 411.95 -2.89 -35.63 By element: Atomic # 1 Polarization: -25.60 SS G_CDS: -1.09 Total: -26.69 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: 3.42 Total: 5.62 kcal Atomic # 7 Polarization: 3.11 SS G_CDS: -2.25 Total: 0.86 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: -4.35 Total: -15.31 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: 2.05 Total: 1.23 kcal Atomic # 35 Polarization: -0.67 SS G_CDS: -0.68 Total: -1.35 kcal Total: -32.74 -2.89 -35.63 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.167 kcal (2) G-P(sol) polarization free energy of solvation -32.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.627 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.794 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds