Wall clock time and date at job start Tue Mar 9 2021 12:59:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53000 * 109.46761 * 2 1 4 4 C 1.52995 * 109.47612 * 239.99822 * 2 1 3 5 5 O 1.45198 * 109.47093 * 119.99589 * 2 1 3 6 6 C 1.34230 * 116.99776 * 59.99859 * 5 2 1 7 7 O 1.20831 * 120.00246 * 0.02562 * 6 5 2 8 8 C 1.50706 * 120.00139 * 179.97438 * 6 5 2 9 9 H 1.09000 * 109.46974 * 300.00495 * 8 6 5 10 10 C 1.52997 * 109.46909 * 60.00296 * 8 6 5 11 11 C 1.52996 * 109.47165 * 180.02562 * 10 8 6 12 12 C 1.53002 * 109.46972 * 300.00293 * 11 10 8 13 13 H 1.09001 * 109.47601 * 180.02562 * 12 11 10 14 14 N 1.46507 * 109.46688 * 299.99809 * 12 11 10 15 15 C 1.34778 * 119.99972 * 274.99840 * 14 12 11 16 16 O 1.21692 * 119.99988 * 359.97438 * 15 14 12 17 17 C 1.46680 * 119.99967 * 180.02562 * 15 14 12 18 18 C 1.37867 * 126.23441 * 180.02562 * 17 15 14 19 19 C 1.39835 * 107.08768 * 179.97438 * 18 17 15 20 20 C 1.50697 * 126.06985 * 179.97438 * 19 18 17 21 21 O 1.42900 * 109.47133 * 65.00056 * 20 19 18 22 22 Si 1.86296 * 109.47129 * 185.00093 * 20 19 18 23 23 C 1.35459 * 107.86082 * 0.02562 * 19 18 17 24 24 N 1.35527 * 108.87057 * 359.76390 * 23 19 18 25 25 C 1.52997 * 109.47415 * 59.99860 * 12 11 10 26 26 C 1.52999 * 109.46957 * 180.02562 * 8 6 5 27 27 H 1.08994 * 109.47403 * 300.00318 * 1 2 3 28 28 H 1.08999 * 109.46845 * 60.00297 * 1 2 3 29 29 H 1.08996 * 109.46737 * 180.02562 * 1 2 3 30 30 H 1.09011 * 109.46967 * 179.97438 * 3 2 1 31 31 H 1.08999 * 109.47198 * 299.99487 * 3 2 1 32 32 H 1.09003 * 109.47564 * 60.00324 * 3 2 1 33 33 H 1.09001 * 109.47033 * 300.00749 * 4 2 1 34 34 H 1.09009 * 109.46645 * 59.99795 * 4 2 1 35 35 H 1.08995 * 109.47628 * 179.97438 * 4 2 1 36 36 H 1.09000 * 109.47140 * 60.00301 * 10 8 6 37 37 H 1.09001 * 109.47375 * 300.00283 * 10 8 6 38 38 H 1.08992 * 109.47534 * 180.02562 * 11 10 8 39 39 H 1.08996 * 109.47134 * 59.99508 * 11 10 8 40 40 H 0.96998 * 119.99855 * 95.00714 * 14 12 11 41 41 H 1.07999 * 126.45583 * 359.97438 * 18 17 15 42 42 H 1.09001 * 109.47226 * 305.00249 * 20 19 18 43 43 H 0.96694 * 114.00115 * 59.99511 * 21 20 19 44 44 H 1.48503 * 109.99997 * 179.97438 * 22 20 19 45 45 H 1.48496 * 110.00112 * 301.31972 * 22 20 19 46 46 H 1.07995 * 125.55747 * 180.02562 * 23 19 18 47 47 H 0.97002 * 125.67541 * 180.26495 * 24 23 19 48 48 H 1.09001 * 109.46922 * 180.02562 * 25 12 11 49 49 H 1.09000 * 109.47140 * 59.99976 * 25 12 11 50 50 H 1.08993 * 109.47839 * 60.00178 * 26 8 6 51 51 H 1.09000 * 109.47160 * 299.99740 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6533 -1.9683 1.3380 7 8 0.9566 -2.5027 0.5079 8 6 2.1182 -2.7436 2.5438 9 1 3.2077 -2.7725 2.5592 10 6 1.6080 -2.0630 3.8155 11 6 2.0805 -2.8497 5.0396 12 6 1.5339 -4.2771 4.9706 13 1 1.8701 -4.8376 5.8430 14 7 0.0695 -4.2387 4.9502 15 6 -0.6191 -4.1689 6.1067 16 8 -0.0244 -4.1382 7.1680 17 6 -2.0852 -4.1310 6.0862 18 6 -2.9140 -4.0595 7.1856 19 6 -4.2286 -4.0455 6.7090 20 6 -5.4767 -3.9749 7.5505 21 8 -5.5200 -2.7207 8.2340 22 14 -6.9745 -4.1369 6.4545 23 6 -4.1809 -4.1080 5.3567 24 7 -2.8841 -4.1554 4.9655 25 6 2.0441 -4.9578 3.6989 26 6 1.5715 -4.1709 2.4741 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1301 1.4426 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9564 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6768 -0.2074 -2.1392 35 1 3.1301 -0.7208 -1.2494 36 1 0.5185 -2.0341 3.8000 37 1 1.9978 -1.0463 3.8648 38 1 1.7167 -2.3652 5.9456 39 1 3.1700 -2.8784 5.0548 40 1 -0.4045 -4.2636 4.1042 41 1 -2.6060 -4.0214 8.2201 42 1 -5.4702 -4.7857 8.2790 43 1 -5.5280 -1.9527 7.6466 44 1 -8.2121 -4.0694 7.2725 45 1 -6.9783 -3.0557 5.4366 46 1 -5.0365 -4.1143 4.6977 47 1 -2.5712 -4.2004 4.0485 48 1 1.6542 -5.9745 3.6496 49 1 3.1336 -4.9863 3.7142 50 1 1.9352 -4.6557 1.5682 51 1 0.4820 -4.1423 2.4585 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14048278_10543058.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:38 Heat of formation + Delta-G solvation = -118.605733 kcal Electronic energy + Delta-G solvation = -32370.366440 eV Core-core repulsion = 28043.627727 eV Total energy + Delta-G solvation = -4326.738713 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.53954 -42.10415 -40.83647 -39.08921 -37.85593 -37.72702 -35.32324 -34.73415 -32.68680 -32.05795 -31.58746 -30.32765 -28.44569 -28.43056 -26.61581 -25.63219 -24.24533 -23.94512 -22.54899 -21.35459 -20.94295 -20.64246 -20.22279 -20.09658 -18.30899 -17.73581 -17.57103 -17.22316 -17.13509 -16.65814 -16.51493 -16.14186 -15.89888 -15.64857 -15.46258 -15.24239 -15.12606 -14.81315 -14.71378 -14.45833 -14.41869 -14.09584 -13.81590 -13.70502 -13.60871 -13.53868 -13.38833 -13.37398 -13.13597 -13.00241 -12.94721 -12.48585 -12.41925 -12.39779 -12.33911 -11.97820 -11.79551 -11.73331 -11.47984 -11.41995 -11.12394 -10.87623 -10.46878 -10.20581 -9.96996 -9.31281 -4.94677 0.41959 1.16546 1.33084 1.54064 1.59404 1.60069 1.92451 2.01761 2.05780 2.38948 3.31307 3.41396 3.46528 3.52088 3.64459 3.69468 3.73023 3.83297 3.85231 3.87767 3.89807 3.97188 4.03469 4.13794 4.20899 4.24296 4.35270 4.44269 4.46043 4.50526 4.58045 4.66567 4.68478 4.73154 4.78066 4.80868 4.82437 4.86252 4.86437 4.92239 4.98899 5.00834 5.04822 5.06466 5.12804 5.18788 5.21644 5.37010 5.52751 5.59824 5.80164 6.19517 6.41282 6.55189 6.78384 7.13801 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.117 3.883 3 C -0.143 4.143 4 C -0.183 4.183 5 O -0.349 6.349 6 C 0.468 3.532 7 O -0.503 6.503 8 C -0.083 4.083 9 H 0.112 0.888 10 C -0.108 4.108 11 C -0.130 4.130 12 C 0.145 3.855 13 H 0.097 0.903 14 N -0.727 5.727 15 C 0.591 3.409 16 O -0.523 6.523 17 C -0.059 4.059 18 C -0.075 4.075 19 C -0.208 4.208 20 C -0.040 4.040 21 O -0.530 6.530 22 Si 0.683 3.317 23 C 0.035 3.965 24 N -0.535 5.535 25 C -0.128 4.128 26 C -0.104 4.104 27 H 0.061 0.939 28 H 0.073 0.927 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.080 0.920 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.073 0.927 35 H 0.062 0.938 36 H 0.065 0.935 37 H 0.079 0.921 38 H 0.078 0.922 39 H 0.080 0.920 40 H 0.393 0.607 41 H 0.150 0.850 42 H 0.115 0.885 43 H 0.374 0.626 44 H -0.258 1.258 45 H -0.261 1.261 46 H 0.175 0.825 47 H 0.417 0.583 48 H 0.079 0.921 49 H 0.087 0.913 50 H 0.080 0.920 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.771 -0.831 -5.680 5.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.081 3.919 3 C -0.200 4.200 4 C -0.241 4.241 5 O -0.266 6.266 6 C 0.311 3.689 7 O -0.391 6.391 8 C -0.102 4.102 9 H 0.130 0.870 10 C -0.146 4.146 11 C -0.169 4.169 12 C 0.040 3.960 13 H 0.115 0.885 14 N -0.379 5.379 15 C 0.379 3.621 16 O -0.398 6.398 17 C -0.171 4.171 18 C -0.101 4.101 19 C -0.215 4.215 20 C -0.151 4.151 21 O -0.336 6.336 22 Si 0.584 3.416 23 C -0.102 4.102 24 N -0.131 5.131 25 C -0.166 4.166 26 C -0.142 4.142 27 H 0.080 0.920 28 H 0.092 0.908 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.091 0.909 35 H 0.081 0.919 36 H 0.083 0.917 37 H 0.098 0.902 38 H 0.096 0.904 39 H 0.099 0.901 40 H 0.227 0.773 41 H 0.168 0.832 42 H 0.133 0.867 43 H 0.221 0.779 44 H -0.183 1.183 45 H -0.186 1.186 46 H 0.192 0.808 47 H 0.255 0.745 48 H 0.097 0.903 49 H 0.105 0.895 50 H 0.098 0.902 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.381 -0.954 -5.088 5.190 hybrid contribution 0.203 1.220 -0.971 1.573 sum 0.584 0.266 -6.059 6.093 Atomic orbital electron populations 1.22489 0.93976 1.04587 1.02956 1.22226 0.94403 0.92405 0.82881 1.21874 1.02374 0.92427 1.03282 1.22495 1.01782 1.03054 0.96729 1.86558 1.69597 1.25249 1.45188 1.23631 0.77309 0.80747 0.87215 1.90586 1.35261 1.69957 1.43309 1.21191 1.03285 0.94555 0.91178 0.87021 1.21483 1.01259 0.99787 0.92052 1.21952 1.01514 0.95175 0.98247 1.21028 0.78843 0.96688 0.99399 0.88490 1.46030 1.07542 1.76206 1.08163 1.17046 0.84776 0.76204 0.84113 1.90876 1.69146 1.49756 1.30068 1.20447 0.90595 1.19024 0.87037 1.21223 0.90770 1.00109 0.98034 1.19832 0.95844 1.12937 0.92905 1.24324 1.01132 0.88585 1.01028 1.86610 1.95605 1.15040 1.36368 0.95375 0.76699 0.89658 0.79857 1.21895 0.86390 1.06045 0.95857 1.41938 1.06158 1.56735 1.08316 1.21887 1.02439 0.99442 0.92812 1.21444 1.01083 0.92569 0.99061 0.92017 0.90845 0.89934 0.91335 0.90156 0.91391 0.89861 0.90852 0.91906 0.91665 0.90197 0.90369 0.90112 0.77272 0.83194 0.86676 0.77896 1.18302 1.18579 0.80803 0.74520 0.90253 0.89479 0.90152 0.91507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.02 8.37 37.16 0.31 0.29 16 2 C 0.12 0.03 1.13 -90.62 -0.10 -0.07 16 3 C -0.14 0.17 8.85 37.16 0.33 0.50 16 4 C -0.18 -0.04 8.37 37.16 0.31 0.27 16 5 O -0.35 -0.36 9.79 -39.26 -0.38 -0.75 16 6 C 0.47 0.26 6.57 36.01 0.24 0.49 16 7 O -0.50 -1.15 11.48 -18.75 -0.22 -1.37 16 8 C -0.08 0.17 2.63 -91.77 -0.24 -0.07 16 9 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 10 C -0.11 0.20 4.98 -26.73 -0.13 0.07 16 11 C -0.13 0.22 5.60 -26.73 -0.15 0.07 16 12 C 0.14 -0.24 2.78 -67.93 -0.19 -0.43 16 13 H 0.10 -0.01 7.57 -51.93 -0.39 -0.40 16 14 N -0.73 1.01 4.23 -55.11 -0.23 0.78 16 15 C 0.59 1.14 7.75 -12.85 -0.10 1.04 16 16 O -0.52 -3.04 16.54 5.20 0.09 -2.95 16 17 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 18 C -0.08 -0.17 10.59 -39.12 -0.41 -0.58 16 19 C -0.21 -0.05 5.43 -105.02 -0.57 -0.62 16 20 C -0.04 0.00 3.02 36.00 0.11 0.11 16 21 O -0.53 -1.05 12.88 -35.23 -0.45 -1.50 16 22 Si 0.68 -0.99 30.60 -169.99 -5.20 -6.19 16 23 C 0.03 -0.07 10.45 -16.91 -0.18 -0.24 16 24 N -0.54 1.15 5.99 -9.39 -0.06 1.09 16 25 C -0.13 0.45 5.61 -26.70 -0.15 0.30 16 26 C -0.10 0.29 4.33 -26.70 -0.12 0.18 16 27 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.08 0.13 5.89 -51.93 -0.31 -0.18 16 30 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 31 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 0.15 5.89 -51.93 -0.31 -0.15 16 34 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 35 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.06 -0.08 7.61 -51.93 -0.39 -0.48 16 37 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 38 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.39 -1.36 6.00 -40.82 -0.24 -1.60 16 41 H 0.15 0.48 8.06 -52.49 -0.42 0.05 16 42 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 43 H 0.37 -0.35 8.70 45.56 0.40 0.04 16 44 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 45 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 46 H 0.18 -0.80 6.21 -52.49 -0.33 -1.12 16 47 H 0.42 -2.12 8.19 -40.82 -0.33 -2.45 16 48 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 49 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 50 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 51 H 0.07 -0.19 6.47 -51.93 -0.34 -0.53 16 LS Contribution 401.69 15.07 6.05 6.05 Total: 0.00 -8.88 401.69 -10.22 -19.10 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -8.19 Total: -14.90 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -1.62 Total: 0.64 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -0.29 Total: 1.87 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -0.97 Total: -6.57 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.20 Total: -6.19 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -8.88 -10.22 -19.10 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14048278_10543058.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.508 kcal (2) G-P(sol) polarization free energy of solvation -8.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds