Wall clock time and date at job start Tue Mar 9 2021 13:02:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34657 * 124.85113 * 2 1 4 4 C 1.36765 * 108.39656 * 179.97438 * 3 2 1 5 5 C 1.47269 * 126.93801 * 179.97438 * 4 3 2 6 6 O 1.21626 * 119.99595 * 180.02562 * 5 4 3 7 7 N 1.34773 * 120.00210 * 0.02562 * 5 4 3 8 8 C 1.46497 * 120.00128 * 179.97438 * 7 5 4 9 9 H 1.09002 * 109.47182 * 325.00516 * 8 7 5 10 10 C 1.52997 * 109.46983 * 85.00506 * 8 7 5 11 11 C 1.52996 * 109.47131 * 59.99859 * 10 8 7 12 12 C 1.53002 * 109.46972 * 60.00459 * 11 10 8 13 13 H 1.08996 * 109.47407 * 59.99513 * 12 11 10 14 14 C 1.50696 * 109.47303 * 179.97438 * 12 11 10 15 15 O 1.20827 * 120.00253 * 119.99267 * 14 12 11 16 16 O 1.34230 * 120.00181 * 300.00251 * 14 12 11 17 17 C 1.45198 * 117.00175 * 179.97438 * 16 14 12 18 18 C 1.53004 * 109.46931 * 59.99838 * 17 16 14 19 19 C 1.53000 * 109.46949 * 179.97438 * 17 16 14 20 20 C 1.52997 * 109.47230 * 299.99694 * 17 16 14 21 21 C 1.52997 * 109.46817 * 299.99733 * 12 11 10 22 22 C 1.52999 * 109.47704 * 205.00617 * 8 7 5 23 23 C 1.46687 * 106.11854 * 0.26328 * 4 3 2 24 24 C 1.34489 * 106.32805 * 359.56572 * 23 4 3 25 25 C 1.50696 * 125.56811 * 180.14432 * 24 23 4 26 26 O 1.42900 * 109.47365 * 150.33664 * 25 24 23 27 27 Si 1.86306 * 109.47336 * 30.34021 * 25 24 23 28 28 H 1.09000 * 109.47251 * 90.03132 * 1 2 3 29 29 H 1.09004 * 109.46755 * 210.02105 * 1 2 3 30 30 H 1.08993 * 109.47432 * 330.02156 * 1 2 3 31 31 H 1.07998 * 125.79967 * 359.95722 * 3 2 1 32 32 H 0.97001 * 120.00193 * 0.02562 * 7 5 4 33 33 H 1.09001 * 109.47289 * 299.99909 * 10 8 7 34 34 H 1.09000 * 109.47611 * 180.02562 * 10 8 7 35 35 H 1.08996 * 109.47452 * 300.00000 * 11 10 8 36 36 H 1.09000 * 109.47054 * 180.02562 * 11 10 8 37 37 H 1.08995 * 109.47441 * 59.99802 * 18 17 16 38 38 H 1.09006 * 109.46468 * 180.02562 * 18 17 16 39 39 H 1.08995 * 109.46829 * 299.99547 * 18 17 16 40 40 H 1.09003 * 109.46855 * 60.00376 * 19 17 16 41 41 H 1.09006 * 109.47145 * 179.97438 * 19 17 16 42 42 H 1.08995 * 109.47305 * 300.00126 * 19 17 16 43 43 H 1.08995 * 109.47467 * 59.99880 * 20 17 16 44 44 H 1.08996 * 109.47244 * 179.97438 * 20 17 16 45 45 H 1.09003 * 109.47209 * 300.00012 * 20 17 16 46 46 H 1.09001 * 109.47502 * 300.00518 * 21 12 11 47 47 H 1.09001 * 109.47289 * 180.02562 * 21 12 11 48 48 H 1.08993 * 109.47839 * 180.02562 * 22 8 7 49 49 H 1.09000 * 109.47160 * 59.99903 * 22 8 7 50 50 H 1.08001 * 126.83534 * 179.73783 * 23 4 3 51 51 H 1.09002 * 109.47546 * 270.34103 * 25 24 23 52 52 H 0.96703 * 114.00274 * 300.00831 * 26 25 24 53 53 H 1.48494 * 109.99853 * 58.67900 * 27 25 24 54 54 H 1.48500 * 110.00201 * 179.97438 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5461 0.7177 0.0006 5 6 4.7283 1.5959 0.0003 6 8 5.8446 1.1129 0.0004 7 7 4.5733 2.9346 -0.0002 8 6 5.7493 3.8082 0.0001 9 1 6.5427 3.3492 0.5899 10 6 6.2341 4.0111 -1.4368 11 6 5.1204 4.6553 -2.2647 12 6 4.7501 6.0091 -1.6555 13 1 5.6251 6.6590 -1.6553 14 6 3.6535 6.6440 -2.4713 15 8 2.5926 6.9071 -1.9565 16 8 3.8554 6.9170 -3.7699 17 6 2.7550 7.5280 -4.4938 18 6 2.3968 8.8657 -3.8432 19 6 3.1692 7.7632 -5.9478 20 6 1.5397 6.5995 -4.4531 21 6 4.2652 5.8062 -0.2187 22 6 5.3790 5.1620 0.6093 23 6 3.5375 -0.7492 -0.0055 24 6 2.2447 -1.1197 0.0006 25 6 1.7398 -2.5396 0.0007 26 8 0.4807 -2.5974 0.6739 27 14 2.9647 -3.6342 0.8796 28 1 -0.3634 -0.0006 -1.0277 29 1 -0.3633 -0.8898 0.5142 30 1 -0.3634 0.8901 0.5135 31 1 1.8767 2.1240 -0.0007 32 1 3.6830 3.3198 0.0001 33 1 6.4981 3.0467 -1.8708 34 1 7.1094 4.6607 -1.4367 35 1 4.2454 4.0054 -2.2649 36 1 5.4657 4.7994 -3.2885 37 1 3.2626 9.5272 -3.8722 38 1 1.5704 9.3241 -4.3865 39 1 2.1018 8.6984 -2.8074 40 1 3.4246 6.8104 -6.4115 41 1 2.3429 8.2215 -6.4914 42 1 4.0348 8.4249 -5.9765 43 1 1.2447 6.4322 -3.4173 44 1 0.7135 7.0583 -4.9962 45 1 1.7948 5.6464 -4.9166 46 1 3.3903 5.1562 -0.2187 47 1 4.0009 6.7706 0.2152 48 1 6.2538 5.8121 0.6091 49 1 5.0336 5.0175 1.6330 50 1 4.3981 -1.4017 -0.0108 51 1 1.6185 -2.8822 -1.0269 52 1 0.5136 -2.3061 1.5954 53 1 3.1630 -3.1585 2.2722 54 1 2.4780 -5.0372 0.8871 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14048278_13287730.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:12 Heat of formation + Delta-G solvation = -106.668506 kcal Electronic energy + Delta-G solvation = -34649.155755 eV Core-core repulsion = 30167.397059 eV Total energy + Delta-G solvation = -4481.758695 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.208 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.48945 -42.08203 -40.80231 -39.02839 -37.97680 -37.80073 -35.24840 -34.59610 -33.74362 -31.93209 -31.82235 -30.64227 -28.41903 -28.34004 -27.55658 -26.37288 -25.41427 -23.87769 -23.71575 -22.42679 -21.12627 -20.83161 -20.57000 -20.01058 -19.12864 -18.24116 -17.59655 -17.49135 -17.16773 -17.09025 -16.79163 -16.43263 -16.30015 -15.82237 -15.63561 -15.45541 -15.40841 -15.02598 -14.89002 -14.85894 -14.63414 -14.48878 -14.12164 -13.97162 -13.58020 -13.51647 -13.42869 -13.32578 -13.23296 -13.18452 -13.06987 -12.98796 -12.95485 -12.89232 -12.46934 -12.36389 -12.25074 -12.15871 -11.98185 -11.81520 -11.53248 -11.39557 -11.29240 -10.95518 -10.90258 -10.83487 -10.04825 -9.55719 -9.21717 -4.89467 0.74366 1.03297 1.19431 1.44267 1.63387 1.68773 1.80740 2.06255 2.34441 2.59527 3.14852 3.45528 3.55981 3.62021 3.68085 3.70847 3.76484 3.88103 3.90563 3.92117 4.02729 4.09076 4.14228 4.29948 4.38579 4.41756 4.44609 4.44978 4.47034 4.50792 4.54612 4.55906 4.67174 4.72033 4.76869 4.78206 4.82640 4.83609 4.89159 4.91754 4.97471 5.06465 5.08439 5.09240 5.13043 5.20169 5.20996 5.25021 5.30467 5.33265 5.56805 5.60883 5.68460 5.96360 6.21007 6.31198 6.66316 6.80899 7.38666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.426 5.426 3 C 0.064 3.936 4 C -0.258 4.258 5 C 0.589 3.411 6 O -0.588 6.588 7 N -0.712 5.712 8 C 0.143 3.857 9 H 0.077 0.923 10 C -0.123 4.123 11 C -0.099 4.099 12 C -0.077 4.077 13 H 0.126 0.874 14 C 0.466 3.534 15 O -0.523 6.523 16 O -0.356 6.356 17 C 0.108 3.892 18 C -0.180 4.180 19 C -0.140 4.140 20 C -0.179 4.179 21 C -0.099 4.099 22 C -0.116 4.116 23 C -0.154 4.154 24 C -0.023 4.023 25 C -0.045 4.045 26 O -0.539 6.539 27 Si 0.776 3.224 28 H 0.078 0.922 29 H 0.113 0.887 30 H 0.101 0.899 31 H 0.197 0.803 32 H 0.405 0.595 33 H 0.054 0.946 34 H 0.093 0.907 35 H 0.059 0.941 36 H 0.076 0.924 37 H 0.063 0.937 38 H 0.084 0.916 39 H 0.065 0.935 40 H 0.067 0.933 41 H 0.093 0.907 42 H 0.068 0.932 43 H 0.066 0.934 44 H 0.083 0.917 45 H 0.061 0.939 46 H 0.067 0.933 47 H 0.077 0.923 48 H 0.099 0.901 49 H 0.082 0.918 50 H 0.157 0.843 51 H 0.132 0.868 52 H 0.388 0.612 53 H -0.294 1.294 54 H -0.288 1.288 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.753 3.383 -1.525 4.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.100 5.100 3 C -0.074 4.074 4 C -0.268 4.268 5 C 0.379 3.621 6 O -0.469 6.469 7 N -0.365 5.365 8 C 0.039 3.961 9 H 0.095 0.905 10 C -0.162 4.162 11 C -0.137 4.137 12 C -0.096 4.096 13 H 0.144 0.856 14 C 0.310 3.690 15 O -0.413 6.413 16 O -0.274 6.274 17 C 0.072 3.928 18 C -0.237 4.237 19 C -0.197 4.197 20 C -0.236 4.236 21 C -0.137 4.137 22 C -0.154 4.154 23 C -0.178 4.178 24 C -0.133 4.133 25 C -0.154 4.154 26 O -0.347 6.347 27 Si 0.680 3.320 28 H 0.096 0.904 29 H 0.131 0.869 30 H 0.120 0.880 31 H 0.214 0.786 32 H 0.242 0.758 33 H 0.073 0.927 34 H 0.111 0.889 35 H 0.078 0.922 36 H 0.094 0.906 37 H 0.082 0.918 38 H 0.103 0.897 39 H 0.084 0.916 40 H 0.086 0.914 41 H 0.112 0.888 42 H 0.087 0.913 43 H 0.085 0.915 44 H 0.102 0.898 45 H 0.080 0.920 46 H 0.085 0.915 47 H 0.095 0.905 48 H 0.117 0.883 49 H 0.101 0.899 50 H 0.174 0.826 51 H 0.150 0.850 52 H 0.238 0.762 53 H -0.220 1.220 54 H -0.215 1.215 Dipole moment (debyes) X Y Z Total from point charges -2.747 2.367 -1.322 3.860 hybrid contribution -1.373 0.695 0.584 1.646 sum -4.121 3.062 -0.738 5.187 Atomic orbital electron populations 1.22722 0.74834 1.06964 1.04860 1.43703 1.07934 1.04645 1.53760 1.22306 0.89418 0.92938 1.02715 1.20400 0.92164 0.94143 1.20103 1.17615 0.87714 0.82184 0.74606 1.90745 1.27375 1.76083 1.52713 1.45878 1.10415 1.04866 1.75302 1.21003 0.87974 0.90489 0.96637 0.90524 1.21870 0.98549 1.01061 0.94718 1.21378 0.99265 0.93326 0.99732 1.21233 0.96127 0.98164 0.94054 0.85590 1.24092 0.89000 0.74909 0.81002 1.90576 1.28126 1.50252 1.72295 1.86564 1.44560 1.72696 1.23569 1.22397 0.85052 0.92697 0.92627 1.22457 1.02939 0.95773 1.02542 1.21882 1.03324 1.03235 0.91245 1.22447 0.97720 0.99717 1.03759 1.21400 0.98389 1.02181 0.91723 1.21804 0.99980 0.94264 0.99360 1.21821 0.95557 0.93469 1.06917 1.20841 0.90489 0.89733 1.12197 1.24771 0.92493 0.94047 1.04106 1.86534 1.29651 1.88591 1.29943 0.93287 0.84428 0.74498 0.79784 0.90382 0.86940 0.88023 0.78614 0.75764 0.92724 0.88891 0.92211 0.90560 0.91794 0.89745 0.91623 0.91393 0.88845 0.91257 0.91543 0.89764 0.91967 0.91463 0.90465 0.88266 0.89895 0.82550 0.85046 0.76231 1.22041 1.21490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.30 10.71 127.77 1.37 1.07 16 2 N -0.43 0.51 3.09 -533.26 -1.65 -1.14 16 3 C 0.06 -0.06 10.83 83.91 0.91 0.85 16 4 C -0.26 -1.29 6.29 -19.04 -0.12 -1.41 16 5 C 0.59 4.49 7.77 86.62 0.67 5.17 16 6 O -0.59 -9.35 16.63 -4.11 -0.07 -9.42 16 7 N -0.71 -0.25 4.22 -445.96 -1.88 -2.13 16 8 C 0.14 -0.13 2.78 44.99 0.13 -0.01 16 9 H 0.08 0.24 7.58 -2.39 -0.02 0.23 16 10 C -0.12 0.15 5.60 30.59 0.17 0.32 16 11 C -0.10 0.21 4.98 30.59 0.15 0.37 16 12 C -0.08 0.24 2.63 -11.54 -0.03 0.21 16 13 H 0.13 -0.76 8.14 -2.39 -0.02 -0.78 16 14 C 0.47 1.08 6.57 71.23 0.47 1.54 16 15 O -0.52 -3.22 11.49 21.96 0.25 -2.97 16 16 O -0.36 -1.07 9.79 -51.41 -0.50 -1.58 16 17 C 0.11 0.12 1.13 -10.79 -0.01 0.11 16 18 C -0.18 -0.20 8.37 71.98 0.60 0.41 16 19 C -0.14 0.35 8.85 71.98 0.64 0.99 16 20 C -0.18 -0.18 8.37 71.98 0.60 0.42 16 21 C -0.10 0.45 4.32 30.60 0.13 0.58 16 22 C -0.12 0.68 5.61 30.60 0.17 0.85 16 23 C -0.15 -0.74 9.50 23.62 0.22 -0.51 16 24 C -0.02 -0.03 6.13 40.98 0.25 0.22 16 25 C -0.04 0.07 2.98 71.23 0.21 0.28 16 26 O -0.54 1.03 9.95 -148.98 -1.48 -0.46 16 27 Si 0.78 -0.56 31.13 68.60 2.14 1.58 16 28 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 29 H 0.11 -0.75 4.93 -2.38 -0.01 -0.76 16 30 H 0.10 -1.05 8.13 -2.39 -0.02 -1.07 16 31 H 0.20 -1.56 7.45 -2.91 -0.02 -1.58 16 32 H 0.41 -1.66 5.81 -92.71 -0.54 -2.20 16 33 H 0.05 0.22 8.14 -2.39 -0.02 0.21 16 34 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 35 H 0.06 -0.02 7.60 -2.39 -0.02 -0.04 16 36 H 0.08 -0.11 8.11 -2.39 -0.02 -0.13 16 37 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 38 H 0.08 -0.14 8.14 -2.38 -0.02 -0.16 16 39 H 0.06 0.33 5.89 -2.39 -0.01 0.32 16 40 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 41 H 0.09 -0.50 8.14 -2.38 -0.02 -0.52 16 42 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.07 0.31 5.89 -2.39 -0.01 0.30 16 44 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 46 H 0.07 -0.27 6.46 -2.39 -0.02 -0.29 16 47 H 0.08 -0.27 8.10 -2.39 -0.02 -0.29 16 48 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 49 H 0.08 -0.51 8.14 -2.39 -0.02 -0.52 16 50 H 0.16 0.57 6.91 -2.91 -0.02 0.55 16 51 H 0.13 -0.44 7.96 -2.39 -0.02 -0.46 16 52 H 0.39 -2.57 8.38 -74.06 -0.62 -3.19 16 53 H -0.29 -1.61 7.11 99.48 0.71 -0.90 16 54 H -0.29 -1.44 7.11 99.48 0.71 -0.73 16 Total: 0.00 -22.11 418.99 3.14 -18.98 By element: Atomic # 1 Polarization: -14.12 SS G_CDS: -0.21 Total: -14.32 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: 6.54 Total: 11.46 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -3.53 Total: -3.27 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -1.80 Total: -14.42 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: 2.14 Total: 1.58 kcal Total: -22.11 3.14 -18.98 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14048278_13287730.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.693 kcal (2) G-P(sol) polarization free energy of solvation -22.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds