Wall clock time and date at job start Tue Mar 9 2021 14:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35661 * 117.00394 * 2 1 4 4 C 1.38405 * 120.11718 * 0.23246 * 3 2 1 5 5 C 1.38723 * 120.03007 * 180.27661 * 4 3 2 6 6 O 1.35721 * 119.86431 * 179.76375 * 5 4 3 7 7 C 1.42901 * 116.99476 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27476 * 359.74467 * 5 4 3 9 9 C 1.50704 * 119.88123 * 179.97438 * 8 5 4 10 10 O 1.42896 * 109.46740 * 75.01918 * 9 8 5 11 11 Si 1.86297 * 109.47228 * 195.02180 * 9 8 5 12 12 C 1.37583 * 120.24007 * 0.02562 * 8 5 4 13 13 C 1.39814 * 119.96253 * 359.97438 * 12 8 5 14 14 C 1.47309 * 120.13635 * 179.97438 * 13 12 8 15 15 O 1.21611 * 120.00480 * 179.97438 * 14 13 12 16 16 N 1.34777 * 119.99749 * 359.97438 * 14 13 12 17 17 C 1.46498 * 119.99929 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.84967 * 336.18904 * 17 16 14 19 19 C 1.53950 * 113.61390 * 107.46691 * 17 16 14 20 20 C 1.53777 * 87.02353 * 89.19853 * 19 17 16 21 21 H 1.09007 * 113.61584 * 270.77242 * 20 19 17 22 22 C 1.50697 * 113.62019 * 139.95006 * 20 19 17 23 23 C 1.38200 * 119.99378 * 320.59258 * 22 20 19 24 24 C 1.38342 * 119.99226 * 180.29862 * 23 22 20 25 25 Br 1.89102 * 120.01173 * 179.97438 * 24 23 22 26 26 C 1.38304 * 119.98000 * 359.97209 * 24 23 22 27 27 C 1.38238 * 119.98920 * 0.02562 * 26 24 23 28 28 C 1.38218 * 120.01172 * 0.02562 * 27 26 24 29 29 C 1.53784 * 113.61193 * 205.00050 * 17 16 14 30 30 H 1.08998 * 109.47160 * 300.00507 * 1 2 3 31 31 H 1.09003 * 109.47048 * 60.00175 * 1 2 3 32 32 H 1.08994 * 109.46992 * 180.02562 * 1 2 3 33 33 H 1.08001 * 119.98491 * 359.97438 * 4 3 2 34 34 H 1.09002 * 109.46672 * 60.00570 * 7 6 5 35 35 H 1.09009 * 109.46535 * 179.97438 * 7 6 5 36 36 H 1.08998 * 109.47497 * 299.99814 * 7 6 5 37 37 H 1.08996 * 109.46966 * 315.02334 * 9 8 5 38 38 H 0.96697 * 114.00437 * 299.99783 * 10 9 8 39 39 H 1.48494 * 110.00223 * 59.99740 * 11 9 8 40 40 H 1.48501 * 109.99933 * 181.32207 * 11 9 8 41 41 H 1.08000 * 120.01602 * 179.97438 * 12 8 5 42 42 H 0.97001 * 119.99768 * 359.97438 * 16 14 13 43 43 H 1.09003 * 113.66997 * 334.66738 * 19 17 16 44 44 H 1.08996 * 113.61685 * 203.71807 * 19 17 16 45 45 H 1.08002 * 120.00066 * 0.27440 * 23 22 20 46 46 H 1.07994 * 120.00699 * 179.97438 * 26 24 23 47 47 H 1.08001 * 119.99931 * 180.02562 * 27 26 24 48 48 H 1.08003 * 119.99376 * 179.97438 * 28 27 26 49 49 H 1.08997 * 113.61594 * 156.25388 * 29 17 16 50 50 H 1.08994 * 113.61829 * 25.34355 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3711 0.0049 5 6 1.9253 3.6061 -0.0009 6 8 1.1852 4.7438 -0.0010 7 6 -0.2358 4.5931 0.0045 8 6 3.3146 3.6834 -0.0063 9 6 3.9916 5.0298 -0.0132 10 8 3.8992 5.6159 1.2867 11 14 5.7845 4.8210 -0.4743 12 6 4.0725 2.5351 -0.0064 13 6 3.4462 1.2851 -0.0006 14 6 4.2539 0.0532 -0.0013 15 8 3.7066 -1.0328 0.0043 16 7 5.5995 0.1297 -0.0080 17 6 6.4028 -1.0954 -0.0093 18 1 5.8684 -1.9524 0.4008 19 6 7.0884 -1.3820 -1.3576 20 6 8.2713 -0.5451 -0.8427 21 1 8.1863 0.5176 -1.0705 22 6 9.6179 -1.1155 -1.2061 23 6 9.8240 -2.4814 -1.1633 24 6 11.0621 -3.0046 -1.4909 25 35 11.3448 -4.8734 -1.4319 26 6 12.0929 -2.1604 -1.8617 27 6 11.8859 -0.7943 -1.9042 28 6 10.6491 -0.2719 -1.5758 29 6 7.8114 -0.9090 0.5790 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 0.2150 2.3165 0.0082 34 1 -0.5397 4.0461 0.8970 35 1 -0.7054 5.5769 0.0043 36 1 -0.5462 4.0418 -0.8830 37 1 3.5027 5.6786 -0.7399 38 1 2.9923 5.7542 1.5923 39 1 5.8942 4.2121 -1.8243 40 1 6.4709 6.1377 -0.4536 41 1 5.1505 2.5993 -0.0110 42 1 6.0360 0.9959 -0.0128 43 1 6.5776 -0.9370 -2.2115 44 1 7.3310 -2.4337 -1.5093 45 1 9.0187 -3.1402 -0.8737 46 1 13.0597 -2.5683 -2.1171 47 1 12.6907 -0.1349 -2.1942 48 1 10.4878 0.7955 -1.6088 49 1 8.2520 -1.8312 0.9577 50 1 7.8834 -0.0827 1.2861 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:46:09 Heat of formation + Delta-G solvation = -51.016229 kcal Electronic energy + Delta-G solvation = -35488.726106 eV Core-core repulsion = 30688.696878 eV Total energy + Delta-G solvation = -4800.029228 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 2.21 seconds Orbital eigenvalues (eV) -42.16585 -41.46584 -40.41120 -39.86636 -38.73266 -38.32931 -36.95757 -34.55595 -33.30620 -32.26077 -32.16595 -31.28036 -30.20485 -29.16759 -28.34822 -26.75413 -26.40700 -26.07947 -24.66374 -23.57839 -22.97550 -22.35311 -21.56102 -20.27358 -19.93917 -18.79419 -18.53770 -18.05746 -17.72282 -17.33117 -17.21166 -16.84541 -16.67193 -16.44898 -16.27223 -16.16106 -15.84544 -15.70539 -15.56762 -15.34804 -15.08455 -14.70762 -14.50907 -14.36304 -14.29790 -14.18465 -14.04694 -13.63753 -13.54965 -13.49165 -13.29810 -12.93467 -12.87781 -12.69857 -12.58898 -12.40239 -12.15736 -11.98091 -11.92017 -11.70848 -11.53082 -11.35382 -11.28183 -11.20583 -11.15446 -10.69162 -10.03274 -9.95312 -9.82613 -9.60678 -9.17875 -5.01087 -0.26608 0.08388 0.10704 0.25585 0.69568 1.33679 1.55734 1.82137 1.90674 1.96180 2.09698 2.12862 2.55736 2.66886 3.36846 3.41749 3.47324 3.57511 3.64206 3.66952 3.71042 3.80079 3.87702 3.90800 3.92782 3.96178 4.00658 4.05329 4.08388 4.09856 4.14177 4.17586 4.24193 4.32279 4.34971 4.38265 4.49540 4.56037 4.66929 4.69749 4.73604 4.79587 4.88585 4.92853 4.93664 4.98531 5.00524 5.11615 5.20761 5.23721 5.33035 5.49568 5.64527 5.79940 5.88252 6.22816 6.56038 6.56497 7.36644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.232 3.768 4 C -0.309 4.309 5 C 0.207 3.793 6 O -0.309 6.309 7 C 0.023 3.977 8 C -0.190 4.190 9 C -0.065 4.065 10 O -0.536 6.536 11 Si 0.733 3.267 12 C 0.001 3.999 13 C -0.205 4.205 14 C 0.569 3.431 15 O -0.515 6.515 16 N -0.715 5.715 17 C 0.123 3.877 18 H 0.108 0.892 19 C -0.145 4.145 20 C -0.076 4.076 21 H 0.102 0.898 22 C -0.064 4.064 23 C -0.088 4.088 24 C -0.087 4.087 25 Br -0.050 7.050 26 C -0.096 4.096 27 C -0.111 4.111 28 C -0.101 4.101 29 C -0.136 4.136 30 H 0.058 0.942 31 H 0.057 0.943 32 H 0.108 0.892 33 H 0.145 0.855 34 H 0.061 0.939 35 H 0.108 0.892 36 H 0.060 0.940 37 H 0.075 0.925 38 H 0.367 0.633 39 H -0.246 1.246 40 H -0.252 1.252 41 H 0.140 0.860 42 H 0.398 0.602 43 H 0.076 0.924 44 H 0.095 0.905 45 H 0.134 0.866 46 H 0.132 0.868 47 H 0.132 0.868 48 H 0.129 0.871 49 H 0.099 0.901 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.100 3.645 0.459 4.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.183 3.817 4 C -0.328 4.328 5 C 0.160 3.840 6 O -0.221 6.221 7 C -0.072 4.072 8 C -0.191 4.191 9 C -0.174 4.174 10 O -0.341 6.341 11 Si 0.631 3.369 12 C -0.018 4.018 13 C -0.209 4.209 14 C 0.357 3.643 15 O -0.390 6.390 16 N -0.368 5.368 17 C 0.018 3.982 18 H 0.126 0.874 19 C -0.184 4.184 20 C -0.094 4.094 21 H 0.120 0.880 22 C -0.065 4.065 23 C -0.108 4.108 24 C -0.167 4.167 25 Br 0.035 6.965 26 C -0.116 4.116 27 C -0.130 4.130 28 C -0.119 4.119 29 C -0.174 4.174 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.126 0.874 33 H 0.163 0.837 34 H 0.080 0.920 35 H 0.126 0.874 36 H 0.078 0.922 37 H 0.092 0.908 38 H 0.214 0.786 39 H -0.170 1.170 40 H -0.176 1.176 41 H 0.157 0.843 42 H 0.233 0.767 43 H 0.095 0.905 44 H 0.113 0.887 45 H 0.151 0.849 46 H 0.150 0.850 47 H 0.150 0.850 48 H 0.147 0.853 49 H 0.117 0.883 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.019 2.323 -0.119 2.539 hybrid contribution -2.057 1.472 -0.449 2.569 sum -3.076 3.795 -0.568 4.918 Atomic orbital electron populations 1.23246 0.78201 1.04923 1.01288 1.86407 1.21188 1.24945 1.85770 1.18708 0.90630 0.84437 0.87951 1.21278 1.01119 0.91459 1.18986 1.18747 0.90352 0.84809 0.90115 1.86036 1.19944 1.28914 1.87226 1.23222 0.77341 1.04746 1.01883 1.19435 0.90449 0.96784 1.12457 1.25261 1.13174 0.90435 0.88524 1.86719 1.32265 1.83247 1.31855 0.93419 0.75599 0.85555 0.82286 1.20663 0.98584 0.89868 0.92660 1.19075 0.90686 0.93593 1.17571 1.17760 0.81673 0.88530 0.76309 1.90853 1.71306 1.28624 1.48223 1.45550 1.05747 1.08986 1.76519 1.21837 0.91106 0.88514 0.96754 0.87414 1.23618 0.95606 1.01024 0.98157 1.21655 0.90602 1.00113 0.97025 0.87973 1.19702 0.95416 0.92647 0.98739 1.20971 0.95558 0.95230 0.99059 1.21821 0.97074 0.90807 1.06961 1.96785 1.97012 1.04973 1.97709 1.21160 0.98347 0.93386 0.98704 1.21201 0.97628 0.94621 0.99509 1.21236 0.92634 1.00111 0.97941 1.23453 0.94628 1.03496 0.95844 0.92378 0.92442 0.87398 0.83727 0.92011 0.87408 0.92151 0.90771 0.78587 1.17041 1.17602 0.84257 0.76707 0.90482 0.88680 0.84869 0.85038 0.85008 0.85273 0.88288 0.90008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.87 8.56 -40.60 -0.35 -1.22 16 3 C 0.23 0.54 6.70 -38.73 -0.26 0.28 16 4 C -0.31 -0.09 8.01 -39.34 -0.31 -0.41 16 5 C 0.21 0.11 6.62 -39.07 -0.26 -0.15 16 6 O -0.31 0.13 9.36 -18.87 -0.18 -0.04 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 8 C -0.19 -0.09 5.28 -104.52 -0.55 -0.64 16 9 C -0.07 -0.02 2.32 36.01 0.08 0.06 16 10 O -0.54 -0.55 12.65 -35.23 -0.45 -0.99 16 11 Si 0.73 -0.76 30.16 -169.99 -5.13 -5.88 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.40 5.89 -104.83 -0.62 -1.01 16 14 C 0.57 1.68 7.76 -12.57 -0.10 1.58 16 15 O -0.51 -3.48 14.75 -16.65 -0.25 -3.73 16 16 N -0.72 0.34 5.21 -54.04 -0.28 0.06 16 17 C 0.12 -0.09 4.33 -67.03 -0.29 -0.37 16 18 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 19 C -0.15 0.16 7.27 -25.83 -0.19 -0.03 16 20 C -0.08 0.18 3.85 -90.96 -0.35 -0.17 16 21 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 22 C -0.06 0.05 5.29 -104.63 -0.55 -0.50 16 23 C -0.09 -0.01 8.27 -39.56 -0.33 -0.34 16 24 C -0.09 -0.09 6.22 -39.52 -0.25 -0.34 16 25 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 26 C -0.10 -0.03 9.79 -39.56 -0.39 -0.42 16 27 C -0.11 0.08 10.05 -39.59 -0.40 -0.31 16 28 C -0.10 0.11 9.71 -39.58 -0.38 -0.27 16 29 C -0.14 0.34 7.29 -25.91 -0.19 0.15 16 30 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 31 H 0.06 -0.14 7.67 -51.93 -0.40 -0.54 16 32 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.15 -0.29 4.50 -52.49 -0.24 -0.53 16 34 H 0.06 -0.26 7.65 -51.93 -0.40 -0.66 16 35 H 0.11 -0.53 8.14 -51.92 -0.42 -0.95 16 36 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 37 H 0.07 0.04 7.82 -51.93 -0.41 -0.36 16 38 H 0.37 -0.32 8.59 45.56 0.39 0.07 16 39 H -0.25 0.03 7.11 56.52 0.40 0.43 16 40 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 41 H 0.14 -0.45 3.43 -52.49 -0.18 -0.63 16 42 H 0.40 -1.32 6.72 -40.82 -0.27 -1.59 16 43 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.09 -0.10 6.40 -51.93 -0.33 -0.44 16 45 H 0.13 -0.09 6.73 -52.49 -0.35 -0.44 16 46 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 47 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 48 H 0.13 -0.40 8.05 -52.48 -0.42 -0.83 16 49 H 0.10 -0.23 7.63 -51.93 -0.40 -0.62 16 50 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 LS Contribution 425.70 15.07 6.42 6.42 Total: 0.00 -9.09 425.70 -12.51 -21.60 By element: Atomic # 1 Polarization: -6.17 SS G_CDS: -6.34 Total: -12.51 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.67 Total: -1.34 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.28 Total: 0.06 kcal Atomic # 8 Polarization: -4.77 SS G_CDS: -1.22 Total: -5.99 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.13 Total: -5.88 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -9.09 -12.51 -21.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.416 kcal (2) G-P(sol) polarization free energy of solvation -9.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.21 seconds