Wall clock time and date at job start Tue Mar 9 2021 14:47:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47089 * 2 1 4 4 C 1.50705 * 109.47487 * 120.00086 * 2 1 3 5 5 C 1.38189 * 119.83972 * 254.98495 * 4 2 1 6 6 C 1.38309 * 120.14169 * 179.69825 * 5 4 2 7 7 F 1.35105 * 120.08674 * 180.29528 * 6 5 4 8 8 C 1.39816 * 119.83284 * 0.59251 * 6 5 4 9 9 C 1.47688 * 120.15666 * 179.70432 * 8 6 5 10 10 O 1.21578 * 119.99864 * 359.72335 * 9 8 6 11 11 N 1.34772 * 120.00164 * 179.72744 * 9 8 6 12 12 C 1.46506 * 120.00033 * 179.97438 * 11 9 8 13 13 H 1.08992 * 112.90684 * 336.24748 * 12 11 9 14 14 C 1.54049 * 113.61276 * 107.61836 * 12 11 9 15 15 C 1.53781 * 87.08031 * 89.07129 * 14 12 11 16 16 H 1.08999 * 113.61181 * 270.87794 * 15 14 12 17 17 C 1.50696 * 113.69134 * 139.98880 * 15 14 12 18 18 C 1.38221 * 119.99540 * 142.46687 * 17 15 14 19 19 C 1.38263 * 120.01973 * 180.02562 * 18 17 15 20 20 C 1.38195 * 120.00943 * 359.97438 * 19 18 17 21 21 C 1.38344 * 119.99099 * 359.97438 * 20 19 18 22 22 Br 1.89107 * 120.01008 * 180.02562 * 21 20 19 23 23 C 1.38235 * 119.99550 * 322.18478 * 17 15 14 24 24 C 1.53781 * 87.08070 * 25.42738 * 15 14 12 25 25 C 1.39655 * 119.68447 * 359.42923 * 8 6 5 26 26 C 1.38066 * 119.85675 * 0.27040 * 25 8 6 27 27 F 1.35095 * 119.91868 * 179.97438 * 26 25 8 28 28 H 0.96691 * 113.99821 * 299.99347 * 1 2 3 29 29 H 1.09000 * 109.47652 * 240.00103 * 2 1 3 30 30 H 1.48504 * 110.00036 * 300.00223 * 3 2 1 31 31 H 1.48500 * 109.99839 * 61.31754 * 3 2 1 32 32 H 1.07997 * 119.92719 * 0.02562 * 5 4 2 33 33 H 0.97002 * 120.00078 * 359.97438 * 11 9 8 34 34 H 1.09005 * 113.62125 * 334.52173 * 14 12 11 35 35 H 1.08996 * 113.68970 * 203.62749 * 14 12 11 36 36 H 1.07998 * 119.98773 * 359.97104 * 18 17 15 37 37 H 1.07996 * 119.99345 * 179.97438 * 19 18 17 38 38 H 1.08005 * 120.00447 * 179.97438 * 20 19 18 39 39 H 1.08004 * 120.00456 * 0.02938 * 23 17 15 40 40 H 1.09002 * 113.61445 * 89.11830 * 24 15 14 41 41 H 1.09002 * 113.61408 * 219.93560 * 24 15 14 42 42 H 1.08000 * 120.07154 * 180.30142 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4535 0.0198 2.2811 6 6 2.9106 -0.6253 3.4159 7 9 3.4153 0.0901 4.4448 8 6 2.8549 -2.0203 3.4930 9 6 3.3471 -2.7169 4.6986 10 8 3.8067 -2.0776 5.6250 11 7 3.2869 -4.0613 4.7719 12 6 3.7757 -4.7524 5.9677 13 1 4.5098 -4.1698 6.5241 14 6 2.6522 -5.3344 6.8465 15 6 2.7581 -6.6126 5.9981 16 1 2.1168 -6.6060 5.1168 17 6 2.6382 -7.8830 6.7997 18 6 1.9652 -8.9703 6.2749 19 6 1.8544 -10.1360 7.0101 20 6 2.4170 -10.2147 8.2699 21 6 3.0916 -9.1271 8.7952 22 35 3.8622 -9.2344 10.5187 23 6 3.2063 -7.9629 8.0574 24 6 4.2114 -6.2037 5.7054 25 6 2.3263 -2.7513 2.4269 26 6 1.8679 -2.0936 1.3028 27 9 1.3568 -2.7996 0.2706 28 1 -0.3933 0.4416 0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5878 2.4585 1.2242 32 1 2.4997 1.0970 2.2181 33 1 2.9199 -4.5713 4.0329 34 1 1.6996 -4.8158 6.7378 35 1 2.9402 -5.4766 7.8881 36 1 1.5250 -8.9089 5.2906 37 1 1.3281 -10.9851 6.5998 38 1 2.3300 -11.1252 8.8443 39 1 3.7356 -7.1146 8.4658 40 1 4.9271 -6.5832 6.4347 41 1 4.5180 -6.3883 4.6759 42 1 2.2758 -3.8287 2.4818 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:47:13 Heat of formation + Delta-G solvation = -63.621647 kcal Electronic energy + Delta-G solvation = -30974.400577 eV Core-core repulsion = 26183.356408 eV Total energy + Delta-G solvation = -4791.044169 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.027 amu Computer time = 1.99 seconds Orbital eigenvalues (eV) -50.13922 -50.02450 -41.88095 -40.93738 -40.00208 -38.89263 -37.82087 -34.97716 -33.55033 -33.18159 -31.79329 -31.45722 -30.28444 -28.08903 -26.90867 -26.36738 -24.52083 -24.20369 -23.47722 -22.58660 -22.06299 -20.39365 -19.80073 -18.91414 -18.59767 -18.22449 -17.93823 -17.38798 -17.15779 -16.92296 -16.57512 -16.51565 -16.31580 -16.27390 -16.02489 -15.85490 -15.67284 -15.45732 -15.20829 -14.95934 -14.66592 -14.54801 -14.36848 -14.20831 -13.82759 -13.68340 -13.57713 -13.24571 -13.08337 -12.98671 -12.52604 -12.47430 -12.11761 -12.03556 -11.98702 -11.63992 -11.42867 -11.23841 -11.18545 -10.89370 -10.68982 -10.27517 -9.92848 -9.86764 -9.68927 -5.14744 -0.88654 -0.40217 0.02490 0.17104 0.62743 0.99520 1.34587 1.39098 1.73278 1.78064 2.19445 2.47263 2.71208 2.75564 2.98731 3.07612 3.23044 3.31419 3.39433 3.44272 3.51623 3.64366 3.68310 3.77286 3.90982 3.99445 4.03165 4.14704 4.22246 4.25374 4.29010 4.40130 4.45091 4.52447 4.55768 4.57597 4.63538 4.68012 4.77906 4.81495 4.84026 4.93144 5.12411 5.23086 5.29494 5.34893 5.44690 5.71391 6.15213 6.19182 6.94533 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.080 4.080 3 Si 0.696 3.304 4 C -0.097 4.097 5 C -0.139 4.139 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.141 4.141 9 C 0.563 3.437 10 O -0.510 6.510 11 N -0.706 5.706 12 C 0.120 3.880 13 H 0.111 0.889 14 C -0.144 4.144 15 C -0.074 4.074 16 H 0.101 0.899 17 C -0.066 4.066 18 C -0.101 4.101 19 C -0.110 4.110 20 C -0.095 4.095 21 C -0.087 4.087 22 Br -0.049 7.049 23 C -0.089 4.089 24 C -0.135 4.135 25 C -0.094 4.094 26 C 0.112 3.888 27 F -0.120 7.120 28 H 0.378 0.622 29 H 0.128 0.872 30 H -0.248 1.248 31 H -0.254 1.254 32 H 0.159 0.841 33 H 0.401 0.599 34 H 0.077 0.923 35 H 0.098 0.902 36 H 0.128 0.872 37 H 0.133 0.867 38 H 0.133 0.867 39 H 0.134 0.866 40 H 0.101 0.899 41 H 0.080 0.920 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.306 -1.909 -3.586 4.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.098 4.098 5 C -0.158 4.158 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.145 4.145 9 C 0.349 3.651 10 O -0.385 6.385 11 N -0.359 5.359 12 C 0.015 3.985 13 H 0.129 0.871 14 C -0.183 4.183 15 C -0.093 4.093 16 H 0.119 0.881 17 C -0.067 4.067 18 C -0.119 4.119 19 C -0.129 4.129 20 C -0.115 4.115 21 C -0.166 4.166 22 Br 0.037 6.963 23 C -0.108 4.108 24 C -0.173 4.173 25 C -0.113 4.113 26 C 0.092 3.908 27 F -0.099 7.099 28 H 0.226 0.774 29 H 0.145 0.855 30 H -0.173 1.173 31 H -0.179 1.179 32 H 0.176 0.824 33 H 0.237 0.763 34 H 0.096 0.904 35 H 0.116 0.884 36 H 0.146 0.854 37 H 0.151 0.849 38 H 0.151 0.849 39 H 0.151 0.849 40 H 0.120 0.880 41 H 0.098 0.902 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.817 -0.957 -2.798 3.068 hybrid contribution -1.523 -0.694 -0.193 1.685 sum -0.707 -1.651 -2.991 3.489 Atomic orbital electron populations 1.86689 1.16682 1.79945 1.49262 1.25113 0.84694 1.11772 0.97316 0.94738 0.91327 0.73419 0.80940 1.20433 0.99304 0.92626 0.97479 1.21079 1.00936 1.01845 0.91897 1.17491 0.95228 0.87938 0.85355 1.91662 1.83523 1.77095 1.55901 1.19854 1.05695 0.92543 0.96429 1.17812 0.78871 0.82270 0.86135 1.90904 1.43946 1.65651 1.37982 1.45520 1.64203 1.06065 1.20067 1.21944 0.97109 0.93017 0.86467 0.87115 1.23635 1.00063 0.95163 0.99417 1.21627 0.97941 0.91322 0.98378 0.88119 1.19661 0.97593 0.95351 0.94083 1.21221 0.98034 0.92652 1.00005 1.21209 0.99320 0.98349 0.94024 1.21179 0.96619 0.97623 0.96057 1.21833 1.03777 0.97541 0.93495 1.96795 1.82011 1.98810 1.18677 1.20970 0.99335 0.96614 0.93904 1.23447 0.96167 0.94145 1.03537 1.21168 0.97752 1.01057 0.91356 1.17208 0.98884 0.88839 0.85887 1.91586 1.84241 1.78001 1.56028 0.77393 0.85467 1.17262 1.17871 0.82402 0.76333 0.90419 0.88399 0.85361 0.84941 0.84941 0.84852 0.88048 0.90179 0.83136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.08 12.88 -35.23 -0.45 -0.37 16 2 C -0.08 0.14 2.44 36.01 0.09 0.23 16 3 Si 0.70 -1.83 30.23 -169.99 -5.14 -6.97 16 4 C -0.10 0.15 5.27 -104.48 -0.55 -0.40 16 5 C -0.14 0.21 8.62 -39.57 -0.34 -0.13 16 6 C 0.16 0.09 7.28 -38.97 -0.28 -0.19 16 7 F -0.10 -0.33 15.55 2.25 0.04 -0.29 16 8 C -0.14 0.03 5.88 -104.92 -0.62 -0.59 16 9 C 0.56 0.68 7.77 -12.40 -0.10 0.58 16 10 O -0.51 -2.70 14.94 5.30 0.08 -2.62 16 11 N -0.71 1.36 5.22 -53.87 -0.28 1.08 16 12 C 0.12 -0.21 4.34 -66.97 -0.29 -0.50 16 13 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 14 C -0.14 0.29 7.27 -25.78 -0.19 0.10 16 15 C -0.07 0.22 3.85 -90.96 -0.35 -0.13 16 16 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 17 C -0.07 0.09 5.29 -104.63 -0.55 -0.47 16 18 C -0.10 0.15 9.71 -39.58 -0.38 -0.24 16 19 C -0.11 0.12 10.05 -39.59 -0.40 -0.28 16 20 C -0.09 0.00 9.79 -39.56 -0.39 -0.38 16 21 C -0.09 -0.06 6.22 -39.52 -0.25 -0.30 16 22 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.35 16 23 C -0.09 0.03 8.34 -39.56 -0.33 -0.30 16 24 C -0.14 0.43 7.28 -25.92 -0.19 0.24 16 25 C -0.09 0.21 9.51 -39.12 -0.37 -0.16 16 26 C 0.11 -0.12 7.23 -39.49 -0.29 -0.41 16 27 F -0.12 -0.04 16.73 2.25 0.04 0.00 16 28 H 0.38 -1.25 8.70 45.56 0.40 -0.86 16 29 H 0.13 -0.28 7.89 -51.93 -0.41 -0.69 16 30 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 31 H -0.25 0.29 6.68 56.52 0.38 0.67 16 32 H 0.16 -0.46 4.83 -52.49 -0.25 -0.71 16 33 H 0.40 -1.88 6.73 -40.82 -0.27 -2.15 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.10 -0.19 6.33 -51.93 -0.33 -0.52 16 36 H 0.13 -0.43 8.05 -52.49 -0.42 -0.85 16 37 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 38 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 39 H 0.13 -0.16 6.68 -52.48 -0.35 -0.51 16 40 H 0.10 -0.30 7.71 -51.93 -0.40 -0.70 16 41 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 42 H 0.15 -0.77 6.41 -52.49 -0.34 -1.11 16 LS Contribution 380.48 15.07 5.73 5.73 Total: 0.00 -8.00 380.48 -12.16 -20.16 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -4.10 Total: -11.05 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -5.77 Total: -3.32 kcal Atomic # 7 Polarization: 1.36 SS G_CDS: -0.28 Total: 1.08 kcal Atomic # 8 Polarization: -2.62 SS G_CDS: -0.37 Total: -2.99 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.07 Total: -0.30 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: -5.14 Total: -6.97 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -8.00 -12.16 -20.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.462 kcal (2) G-P(sol) polarization free energy of solvation -8.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.99 seconds