Wall clock time and date at job start Tue Mar 9 2021 14:48:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.46989 * 2 1 4 4 C 1.50706 * 109.47006 * 240.00238 * 2 1 3 5 5 C 1.38904 * 119.67544 * 120.33546 * 4 2 1 6 6 C 1.36470 * 120.61317 * 180.32167 * 5 4 2 7 7 C 1.40070 * 119.82752 * 359.37279 * 6 5 4 8 8 C 1.41590 * 133.37634 * 180.31738 * 7 6 5 9 9 C 1.35861 * 107.72807 * 179.97438 * 8 7 6 10 10 C 1.47063 * 125.42964 * 180.02562 * 9 8 7 11 11 O 1.21650 * 119.99685 * 359.94698 * 10 9 8 12 12 N 1.34769 * 120.00097 * 179.97438 * 10 9 8 13 13 C 1.46503 * 120.00059 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.84519 * 23.80323 * 13 12 10 15 15 C 1.53785 * 113.61492 * 154.99863 * 13 12 10 16 16 C 1.53783 * 87.07758 * 89.12027 * 15 13 12 17 17 H 1.09002 * 113.61335 * 270.88261 * 16 15 13 18 18 C 1.50697 * 113.61524 * 140.06589 * 16 15 13 19 19 C 1.38219 * 119.99311 * 299.72444 * 18 16 15 20 20 C 1.38265 * 120.01712 * 179.76836 * 19 18 16 21 21 C 1.38194 * 120.01103 * 0.50359 * 20 19 18 22 22 C 1.38348 * 119.99146 * 359.74761 * 21 20 19 23 23 Br 1.89102 * 120.01176 * 180.02562 * 22 21 20 24 24 C 1.38243 * 119.99665 * 119.99138 * 18 16 15 25 25 C 1.53779 * 87.08391 * 25.43271 * 16 15 13 26 26 N 1.38149 * 109.14487 * 0.02562 * 9 8 7 27 27 C 1.37488 * 108.79281 * 359.97438 * 26 9 8 28 28 C 1.37714 * 119.67619 * 299.99933 * 4 2 1 29 29 H 0.96703 * 114.00269 * 60.00099 * 1 2 3 30 30 H 1.08998 * 109.47542 * 120.00548 * 2 1 3 31 31 H 1.48495 * 110.00041 * 298.68000 * 3 2 1 32 32 H 1.48494 * 109.99951 * 60.00458 * 3 2 1 33 33 H 1.08003 * 119.69032 * 359.97438 * 5 4 2 34 34 H 1.08002 * 120.08853 * 179.65848 * 6 5 4 35 35 H 1.08001 * 126.13557 * 359.97438 * 8 7 6 36 36 H 0.96998 * 120.00177 * 0.02562 * 12 10 9 37 37 H 1.08994 * 113.61118 * 203.66432 * 15 13 12 38 38 H 1.08998 * 113.61375 * 334.48870 * 15 13 12 39 39 H 1.07994 * 119.99072 * 0.02562 * 19 18 16 40 40 H 1.07998 * 119.99203 * 180.22904 * 20 19 18 41 41 H 1.08008 * 120.00766 * 179.77027 * 21 20 19 42 42 H 1.08002 * 120.00050 * 359.96733 * 24 18 16 43 43 H 1.08999 * 113.61225 * 220.01978 * 25 16 15 44 44 H 1.08995 * 113.61584 * 89.11449 * 25 16 15 45 45 H 0.97004 * 125.60193 * 180.02562 * 26 9 8 46 46 H 1.07999 * 120.09183 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7352 -0.0309 -2.1369 6 6 3.1953 -0.6536 -3.2607 7 6 2.8662 -1.9941 -3.4987 8 6 3.1810 -2.9030 -4.5377 9 6 2.5834 -4.0878 -4.2462 10 6 2.6571 -5.3049 -5.0684 11 8 3.2930 -5.3007 -6.1054 12 7 2.0196 -6.4246 -4.6733 13 6 2.0925 -7.6369 -5.4926 14 1 2.9731 -7.6614 -6.1347 15 6 1.8754 -8.9336 -4.6949 16 6 0.3740 -8.7658 -4.9820 17 1 -0.1502 -8.1725 -4.2327 18 6 -0.3284 -10.0608 -5.2991 19 6 0.0691 -10.8138 -6.3879 20 6 -0.5719 -12.0044 -6.6765 21 6 -1.6171 -12.4369 -5.8826 22 6 -2.0187 -11.6809 -4.7958 23 35 -3.4485 -12.2725 -3.7087 24 6 -1.3739 -10.4927 -4.5043 25 6 0.7821 -7.9629 -6.2284 26 7 1.8955 -3.9670 -3.0542 27 6 2.0565 -2.6875 -2.5776 28 6 1.5945 -2.0289 -1.4419 29 1 -0.3934 0.4417 -0.7651 30 1 1.7924 -0.5139 0.8899 31 1 1.5878 2.4585 -1.2242 32 1 1.5615 2.4678 1.2085 33 1 2.9939 1.0015 -1.9533 34 1 3.8153 -0.1155 -3.9625 35 1 3.7874 -2.6922 -5.4062 36 1 1.5120 -6.4277 -3.8468 37 1 2.3140 -9.8138 -5.1648 38 1 2.1321 -8.8450 -3.6393 39 1 0.8833 -10.4742 -7.0108 40 1 -0.2585 -12.5943 -7.5251 41 1 -2.1202 -13.3651 -6.1103 42 1 -1.6868 -9.9023 -3.6559 43 1 0.1548 -7.0903 -6.4104 44 1 0.9219 -8.5778 -7.1174 45 1 1.3838 -4.6698 -2.6239 46 1 0.9730 -2.5500 -0.7287 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:00 Heat of formation + Delta-G solvation = 52.279508 kcal Electronic energy + Delta-G solvation = -30417.402346 eV Core-core repulsion = 26092.876168 eV Total energy + Delta-G solvation = -4324.526178 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 2.41 seconds Orbital eigenvalues (eV) -42.75377 -41.68734 -40.39176 -39.23902 -38.73794 -37.00419 -34.89364 -33.34405 -33.21981 -32.26517 -31.08268 -30.44146 -30.18356 -27.37267 -26.95723 -26.20762 -24.52492 -23.67570 -23.26542 -22.60314 -22.03902 -21.31853 -20.31127 -19.62740 -18.57217 -18.22475 -17.84379 -17.20384 -16.91604 -16.60506 -16.51772 -16.33123 -16.15924 -15.77365 -15.60484 -15.38485 -15.12793 -15.02467 -14.82649 -14.67101 -14.60293 -14.50409 -14.41394 -14.00133 -13.72094 -13.58106 -13.18788 -13.04136 -12.61984 -12.55954 -12.49034 -12.15235 -12.11488 -12.07621 -11.67321 -11.59630 -11.51220 -11.32194 -11.24018 -10.98206 -10.63168 -10.34382 -9.96921 -9.70828 -9.36309 -8.85982 -4.94929 -0.38058 -0.00990 0.15428 0.49061 0.59830 0.95521 1.27053 1.61138 1.69222 1.82412 1.97733 2.19515 2.44498 2.74024 3.19404 3.32305 3.39910 3.43078 3.52575 3.58362 3.66315 3.67654 3.75310 3.87306 3.94244 3.97954 4.12366 4.20815 4.25581 4.26715 4.38036 4.43430 4.46077 4.48258 4.51640 4.56724 4.63990 4.73178 4.78608 4.80086 4.86047 4.87633 4.93748 5.09847 5.19508 5.24452 5.32953 5.36881 5.42806 5.49435 5.57536 5.68776 5.92922 6.13089 6.28300 6.37131 6.92287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.086 4.086 5 C -0.145 4.145 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.098 4.098 9 C 0.012 3.988 10 C 0.589 3.411 11 O -0.514 6.514 12 N -0.712 5.712 13 C 0.120 3.880 14 H 0.111 0.889 15 C -0.135 4.135 16 C -0.074 4.074 17 H 0.098 0.902 18 C -0.066 4.066 19 C -0.102 4.102 20 C -0.109 4.109 21 C -0.095 4.095 22 C -0.088 4.088 23 Br -0.049 7.049 24 C -0.088 4.088 25 C -0.143 4.143 26 N -0.579 5.579 27 C 0.116 3.884 28 C -0.104 4.104 29 H 0.377 0.623 30 H 0.119 0.881 31 H -0.259 1.259 32 H -0.258 1.258 33 H 0.130 0.870 34 H 0.132 0.868 35 H 0.159 0.841 36 H 0.396 0.604 37 H 0.102 0.898 38 H 0.078 0.922 39 H 0.131 0.869 40 H 0.134 0.866 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.077 0.923 44 H 0.099 0.901 45 H 0.417 0.583 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.823 -0.680 0.734 2.080 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.088 4.088 5 C -0.164 4.164 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.125 4.125 9 C -0.097 4.097 10 C 0.375 3.625 11 O -0.388 6.388 12 N -0.363 5.363 13 C 0.015 3.985 14 H 0.129 0.871 15 C -0.173 4.173 16 C -0.093 4.093 17 H 0.116 0.884 18 C -0.067 4.067 19 C -0.120 4.120 20 C -0.128 4.128 21 C -0.114 4.114 22 C -0.167 4.167 23 Br 0.036 6.964 24 C -0.108 4.108 25 C -0.182 4.182 26 N -0.184 5.184 27 C 0.006 3.994 28 C -0.125 4.125 29 H 0.224 0.776 30 H 0.137 0.863 31 H -0.184 1.184 32 H -0.183 1.183 33 H 0.147 0.853 34 H 0.150 0.850 35 H 0.177 0.823 36 H 0.231 0.769 37 H 0.120 0.880 38 H 0.097 0.903 39 H 0.149 0.851 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.095 0.905 44 H 0.117 0.883 45 H 0.255 0.745 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.568 -0.546 0.938 1.907 hybrid contribution -1.476 -0.604 -0.080 1.597 sum 0.092 -1.150 0.858 1.437 Atomic orbital electron populations 1.86595 1.17680 1.80022 1.49412 1.25053 0.83986 1.11164 0.98268 0.94842 0.91729 0.74218 0.80202 1.19989 0.98285 0.93730 0.96758 1.20483 1.00668 0.99981 0.95255 1.20384 0.97805 0.92035 0.96660 1.18230 1.02705 0.94905 0.96302 1.20985 1.01457 0.90340 0.99670 1.20050 1.03570 0.96504 0.89577 1.17178 0.79052 0.81555 0.84676 1.90888 1.41326 1.83347 1.23261 1.45549 1.53316 1.11182 1.26267 1.21900 0.99767 0.83338 0.93509 0.87062 1.23444 0.94686 0.97608 1.01517 1.21618 0.95162 0.93383 0.99119 0.88400 1.19655 0.95663 0.96165 0.95194 1.21181 0.99749 0.94391 0.96670 1.21209 0.95533 0.96452 0.99590 1.21186 0.97078 0.99609 0.93568 1.21846 0.97898 0.98525 0.98427 1.96790 1.43368 1.89433 1.66773 1.21012 0.95267 0.94766 0.99731 1.23585 0.96980 1.00379 0.97217 1.41886 1.45469 1.11130 1.19895 1.18302 1.00013 0.84607 0.96463 1.19860 1.02626 0.94133 0.95887 0.77559 0.86317 1.18405 1.18342 0.85273 0.84970 0.82337 0.76945 0.87963 0.90317 0.85120 0.84853 0.84909 0.85140 0.90454 0.88266 0.74534 0.85524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.33 12.76 -35.23 -0.45 -0.78 16 2 C -0.07 0.06 2.81 36.01 0.10 0.16 16 3 Si 0.69 -0.95 29.75 -169.99 -5.06 -6.00 16 4 C -0.09 0.03 5.40 -104.56 -0.56 -0.54 16 5 C -0.15 0.10 8.59 -39.97 -0.34 -0.24 16 6 C -0.05 0.01 10.06 -39.53 -0.40 -0.39 16 7 C -0.12 -0.14 6.16 -106.93 -0.66 -0.80 16 8 C -0.10 -0.14 10.53 -39.16 -0.41 -0.55 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.57 16 10 C 0.59 0.72 7.80 -12.69 -0.10 0.62 16 11 O -0.51 -2.51 16.44 5.23 0.09 -2.42 16 12 N -0.71 1.40 5.26 -54.20 -0.29 1.12 16 13 C 0.12 -0.24 4.32 -67.11 -0.29 -0.53 16 14 H 0.11 -0.06 7.46 -51.93 -0.39 -0.44 16 15 C -0.13 0.46 7.29 -25.92 -0.19 0.27 16 16 C -0.07 0.22 3.85 -90.96 -0.35 -0.13 16 17 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 18 C -0.07 0.09 5.29 -104.63 -0.55 -0.46 16 19 C -0.10 0.16 8.63 -39.58 -0.34 -0.18 16 20 C -0.11 0.13 10.05 -39.59 -0.40 -0.27 16 21 C -0.09 0.01 9.79 -39.56 -0.39 -0.38 16 22 C -0.09 -0.05 6.22 -39.52 -0.25 -0.30 16 23 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 24 C -0.09 0.03 9.45 -39.56 -0.37 -0.35 16 25 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 26 N -0.58 0.69 6.07 -7.36 -0.04 0.65 16 27 C 0.12 0.06 7.25 -83.98 -0.61 -0.55 16 28 C -0.10 0.00 9.61 -39.42 -0.38 -0.38 16 29 H 0.38 -0.76 8.70 45.56 0.40 -0.36 16 30 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 31 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 32 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 33 H 0.13 -0.32 4.82 -52.48 -0.25 -0.57 16 34 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 35 H 0.16 0.13 8.06 -52.49 -0.42 -0.30 16 36 H 0.40 -1.80 7.76 -40.82 -0.32 -2.11 16 37 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 38 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 39 H 0.13 -0.43 6.65 -52.49 -0.35 -0.78 16 40 H 0.13 -0.40 8.06 -52.49 -0.42 -0.83 16 41 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 42 H 0.13 -0.18 8.05 -52.49 -0.42 -0.60 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.10 -0.28 6.31 -51.93 -0.33 -0.61 16 45 H 0.42 -1.77 8.12 -40.82 -0.33 -2.10 16 46 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 LS Contribution 403.74 15.07 6.08 6.08 Total: 0.00 -8.30 403.74 -14.59 -22.89 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -5.38 Total: -13.79 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -7.25 Total: -5.40 kcal Atomic # 7 Polarization: 2.09 SS G_CDS: -0.33 Total: 1.76 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -0.36 Total: -3.20 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.06 Total: -6.00 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -8.30 -14.59 -22.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.171 kcal (2) G-P(sol) polarization free energy of solvation -8.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.891 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.41 seconds