Wall clock time and date at job start Tue Mar 9 2021 14:48:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38970 * 119.95599 * 2 1 4 4 O 1.35711 * 119.91554 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17607 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.95575 * 179.97438 * 5 3 2 7 7 O 1.42899 * 109.47549 * 285.00305 * 6 5 3 8 8 Si 1.86301 * 109.47051 * 165.00061 * 6 5 3 9 9 C 1.37684 * 120.08706 * 359.67658 * 5 3 2 10 10 C 1.39756 * 119.90831 * 0.59848 * 9 5 3 11 11 C 1.47602 * 120.08674 * 179.69744 * 10 9 5 12 12 O 1.21589 * 119.99948 * 359.72446 * 11 10 9 13 13 N 1.34777 * 119.99934 * 179.72572 * 11 10 9 14 14 C 1.46501 * 119.99710 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85495 * 23.80985 * 14 13 11 16 16 C 1.53790 * 113.60986 * 154.99936 * 14 13 11 17 17 C 1.53787 * 87.07928 * 89.11638 * 16 14 13 18 18 H 1.08999 * 113.61250 * 270.79514 * 17 16 14 19 19 C 1.50699 * 113.61268 * 139.97882 * 17 16 14 20 20 C 1.38195 * 119.99538 * 120.00101 * 19 17 16 21 21 C 1.38352 * 119.99091 * 180.02562 * 20 19 17 22 22 Br 1.89100 * 120.00806 * 179.97438 * 21 20 19 23 23 C 1.38298 * 119.97736 * 0.24872 * 21 20 19 24 24 C 1.38238 * 119.99461 * 359.47350 * 23 21 20 25 25 C 1.38219 * 120.00580 * 0.53157 * 24 23 21 26 26 C 1.53780 * 113.61389 * 252.49585 * 14 13 11 27 27 C 1.37716 * 119.95059 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.47070 * 270.02687 * 1 2 3 29 29 H 1.09008 * 109.46695 * 30.01949 * 1 2 3 30 30 H 1.08996 * 109.47358 * 150.02275 * 1 2 3 31 31 H 0.96702 * 113.99837 * 89.99912 * 4 3 2 32 32 H 1.09002 * 109.46903 * 45.00610 * 6 5 3 33 33 H 0.96696 * 114.00069 * 179.97438 * 7 6 5 34 34 H 1.48504 * 109.99794 * 60.00113 * 8 6 5 35 35 H 1.48496 * 110.00334 * 181.32188 * 8 6 5 36 36 H 1.07997 * 120.04778 * 180.31706 * 9 5 3 37 37 H 0.96994 * 120.00006 * 359.97438 * 13 11 10 38 38 H 1.08992 * 113.61785 * 334.56544 * 16 14 13 39 39 H 1.08998 * 113.68668 * 203.67196 * 16 14 13 40 40 H 1.07993 * 120.00195 * 0.02562 * 20 19 17 41 41 H 1.08005 * 120.00484 * 179.72694 * 23 21 20 42 42 H 1.07997 * 120.00206 * 180.29153 * 24 23 21 43 43 H 1.08002 * 119.99191 * 179.76835 * 25 24 23 44 44 H 1.09005 * 113.61316 * 156.33817 * 26 14 13 45 45 H 1.08992 * 113.61332 * 25.43487 * 26 14 13 46 46 H 1.07993 * 120.05190 * 0.04400 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5198 2.3778 -0.0005 5 6 3.5912 1.2094 0.0005 6 6 4.3386 2.5179 0.0000 7 8 4.2726 3.1037 -1.3018 8 14 6.1197 2.2159 0.4554 9 6 4.2860 0.0207 0.0078 10 6 3.5918 -1.1922 0.0020 11 6 4.3327 -2.4688 0.0030 12 8 5.5486 -2.4660 0.0038 13 7 3.6615 -3.6375 0.0029 14 6 4.3969 -4.9046 0.0034 15 1 5.4041 -4.8093 0.4092 16 6 3.6014 -6.0783 0.5989 17 6 3.0627 -6.3301 -0.8194 18 1 2.1500 -5.7782 -1.0441 19 6 2.9669 -7.7906 -1.1783 20 6 1.7438 -8.3415 -1.5106 21 6 1.6559 -9.6825 -1.8395 22 35 -0.0176 -10.4370 -2.2936 23 6 2.7912 -10.4721 -1.8306 24 6 4.0152 -9.9189 -1.5036 25 6 4.1026 -8.5792 -1.1750 26 6 4.3401 -5.6503 -1.3403 27 6 2.1946 -1.1932 0.0005 28 1 -0.3633 0.0005 1.0277 29 1 -0.3633 0.8899 -0.5142 30 1 -0.3634 -0.8901 -0.5135 31 1 1.3220 2.7182 0.8827 32 1 3.8876 3.1943 0.7261 33 1 4.7333 3.9507 -1.3757 34 1 6.7460 1.2951 -0.5270 35 1 6.8604 3.5025 0.4896 36 1 5.3659 0.0257 0.0134 37 1 2.6915 -3.6397 0.0026 38 1 2.8342 -5.7701 1.3090 39 1 4.2288 -6.8853 0.9772 40 1 0.8569 -7.7254 -1.5135 41 1 2.7223 -11.5200 -2.0830 42 1 4.9026 -10.5344 -1.5011 43 1 5.0583 -8.1481 -0.9159 44 1 5.1706 -6.3397 -1.4926 45 1 4.1690 -4.9966 -2.1955 46 1 1.6547 -2.1285 0.0002 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:33 Heat of formation + Delta-G solvation = -24.276443 kcal Electronic energy + Delta-G solvation = -30327.835345 eV Core-core repulsion = 26003.185452 eV Total energy + Delta-G solvation = -4324.649893 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.99 seconds Orbital eigenvalues (eV) -41.92018 -41.30288 -40.23115 -38.91096 -37.85880 -37.49872 -34.85254 -34.09689 -33.22285 -32.39176 -31.48854 -30.12971 -28.10149 -27.01227 -26.86302 -26.44760 -24.73817 -23.60420 -22.60520 -21.98059 -21.55257 -20.19189 -19.54225 -18.71820 -18.55954 -18.06546 -17.69768 -16.97230 -16.67066 -16.42071 -16.26392 -16.02604 -15.96183 -15.51706 -15.29203 -15.14341 -14.82045 -14.64647 -14.55433 -14.41715 -14.33173 -13.96962 -13.68539 -13.65937 -13.56895 -13.47108 -13.03654 -13.02902 -12.90208 -12.64144 -12.42391 -12.06726 -12.03824 -11.77718 -11.60895 -11.52452 -11.41822 -11.18748 -10.99875 -10.48888 -10.18935 -9.99282 -9.91712 -9.67705 -9.64298 -4.97384 -0.38182 0.03919 0.06427 0.20535 0.63962 1.22864 1.58189 1.64679 1.95334 1.97530 2.49367 2.56032 3.00662 3.26899 3.30062 3.47173 3.50400 3.58167 3.60153 3.69792 3.74886 3.82858 3.92736 3.96259 3.99654 4.10214 4.17974 4.27199 4.32472 4.34786 4.51447 4.52635 4.55632 4.59444 4.60298 4.63538 4.72500 4.81083 4.85597 4.89684 4.97836 4.98577 5.09249 5.10577 5.14804 5.26243 5.27271 5.38910 5.49847 5.54834 5.73791 6.37735 6.42924 6.54875 7.13624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.484 6.484 5 C -0.104 4.104 6 C -0.063 4.063 7 O -0.528 6.528 8 Si 0.677 3.323 9 C -0.047 4.047 10 C -0.139 4.139 11 C 0.565 3.435 12 O -0.529 6.529 13 N -0.710 5.710 14 C 0.120 3.880 15 H 0.109 0.891 16 C -0.135 4.135 17 C -0.075 4.075 18 H 0.099 0.901 19 C -0.065 4.065 20 C -0.088 4.088 21 C -0.088 4.088 22 Br -0.050 7.050 23 C -0.095 4.095 24 C -0.109 4.109 25 C -0.102 4.102 26 C -0.144 4.144 27 C -0.065 4.065 28 H 0.074 0.926 29 H 0.077 0.923 30 H 0.070 0.930 31 H 0.393 0.607 32 H 0.075 0.925 33 H 0.380 0.620 34 H -0.250 1.250 35 H -0.257 1.257 36 H 0.145 0.855 37 H 0.401 0.599 38 H 0.079 0.921 39 H 0.100 0.900 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.097 0.903 45 H 0.076 0.924 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.201 0.196 4.970 5.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.116 3.884 4 O -0.295 6.295 5 C -0.105 4.105 6 C -0.173 4.173 7 O -0.335 6.335 8 Si 0.578 3.422 9 C -0.065 4.065 10 C -0.142 4.142 11 C 0.353 3.647 12 O -0.406 6.406 13 N -0.361 5.361 14 C 0.015 3.985 15 H 0.127 0.873 16 C -0.172 4.172 17 C -0.093 4.093 18 H 0.117 0.883 19 C -0.066 4.066 20 C -0.108 4.108 21 C -0.167 4.167 22 Br 0.036 6.964 23 C -0.115 4.115 24 C -0.128 4.128 25 C -0.120 4.120 26 C -0.183 4.183 27 C -0.084 4.084 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.089 0.911 31 H 0.251 0.749 32 H 0.093 0.907 33 H 0.227 0.773 34 H -0.174 1.174 35 H -0.182 1.182 36 H 0.163 0.837 37 H 0.236 0.764 38 H 0.097 0.903 39 H 0.119 0.881 40 H 0.149 0.851 41 H 0.150 0.850 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.116 0.884 45 H 0.095 0.905 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.433 -0.614 3.829 4.134 hybrid contribution -0.461 1.044 -0.326 1.187 sum -1.894 0.430 3.502 4.005 Atomic orbital electron populations 1.20735 0.89669 1.03854 1.02813 1.20179 0.97307 0.92015 1.02339 1.18303 0.88709 0.85269 0.96144 1.84783 1.75646 1.35774 1.33296 1.19544 0.92995 0.93955 1.03987 1.24564 1.10311 0.94055 0.88333 1.86636 1.77433 1.40275 1.29202 0.95101 0.74484 0.82262 0.90388 1.21087 1.00848 0.90112 0.94462 1.19752 0.93429 0.93257 1.07798 1.18121 0.87223 0.83475 0.75862 1.90817 1.13290 1.87425 1.49046 1.45558 1.10081 1.04915 1.75586 1.21863 0.97410 0.82239 0.97009 0.87280 1.23437 1.00129 0.97830 0.95854 1.21628 0.99205 0.91505 0.96960 0.88262 1.19684 0.92680 0.95340 0.98886 1.21018 0.98155 0.93141 0.98461 1.21841 0.92226 0.95932 1.06701 1.96783 1.23605 1.83831 1.92223 1.21174 0.91407 1.00042 0.98883 1.21202 0.97420 0.95332 0.98878 1.21186 0.98515 0.93696 0.98610 1.23589 0.97446 0.99211 0.98033 1.21085 0.92545 0.97803 0.96987 0.90775 0.90417 0.91062 0.74935 0.90698 0.77259 1.17430 1.18213 0.83734 0.76362 0.90264 0.88127 0.85089 0.84962 0.84904 0.85142 0.88450 0.90480 0.85030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.01 0.35 0.61 16 2 C -0.12 0.05 5.89 -104.54 -0.62 -0.57 16 3 C 0.16 0.13 6.66 -39.02 -0.26 -0.13 16 4 O -0.48 0.04 11.84 -18.84 -0.22 -0.18 16 5 C -0.10 -0.16 5.30 -104.54 -0.55 -0.71 16 6 C -0.06 -0.03 2.36 36.00 0.09 0.06 16 7 O -0.53 -1.18 12.86 -35.23 -0.45 -1.63 16 8 Si 0.68 0.06 30.18 -169.99 -5.13 -5.07 16 9 C -0.05 -0.10 8.20 -39.22 -0.32 -0.42 16 10 C -0.14 -0.17 5.88 -104.96 -0.62 -0.78 16 11 C 0.57 1.16 7.76 -12.44 -0.10 1.07 16 12 O -0.53 -3.04 15.94 5.29 0.08 -2.95 16 13 N -0.71 0.82 5.21 -54.03 -0.28 0.54 16 14 C 0.12 -0.16 4.32 -67.11 -0.29 -0.45 16 15 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 16 C -0.13 0.40 7.29 -25.91 -0.19 0.21 16 17 C -0.07 0.19 3.86 -90.95 -0.35 -0.16 16 18 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 19 C -0.06 0.06 5.29 -104.63 -0.55 -0.49 16 20 C -0.09 0.00 9.45 -39.55 -0.37 -0.37 16 21 C -0.09 -0.07 6.22 -39.52 -0.25 -0.32 16 22 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 23 C -0.10 -0.01 9.79 -39.56 -0.39 -0.40 16 24 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 25 C -0.10 0.12 8.61 -39.58 -0.34 -0.22 16 26 C -0.14 0.24 7.25 -25.92 -0.19 0.05 16 27 C -0.07 0.06 9.18 -39.22 -0.36 -0.30 16 28 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.08 -0.10 7.52 -51.92 -0.39 -0.49 16 30 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 31 H 0.39 -1.93 9.06 45.56 0.41 -1.52 16 32 H 0.08 -0.14 7.82 -51.93 -0.41 -0.55 16 33 H 0.38 -0.71 8.74 45.56 0.40 -0.31 16 34 H -0.25 -0.95 6.76 56.52 0.38 -0.57 16 35 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 36 H 0.15 0.39 4.47 -52.49 -0.23 0.16 16 37 H 0.40 -1.49 6.72 -40.82 -0.27 -1.76 16 38 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 39 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 40 H 0.13 -0.15 8.05 -52.49 -0.42 -0.57 16 41 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 42 H 0.13 -0.36 8.06 -52.49 -0.42 -0.79 16 43 H 0.13 -0.37 6.66 -52.49 -0.35 -0.72 16 44 H 0.10 -0.21 6.31 -51.93 -0.33 -0.54 16 45 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.13 -0.53 6.39 -52.49 -0.34 -0.86 16 LS Contribution 400.40 15.07 6.03 6.03 Total: 0.00 -9.79 400.40 -12.85 -22.64 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -4.89 Total: -13.40 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -5.70 Total: -3.63 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.28 Total: 0.54 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -0.59 Total: -4.76 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.13 Total: -5.07 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -9.79 -12.85 -22.64 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.632 kcal (2) G-P(sol) polarization free energy of solvation -9.790 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.99 seconds