Wall clock time and date at job start Tue Mar 9 2021 14:48:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38970 * 119.95599 * 2 1 4 4 O 1.35711 * 119.91554 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17607 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.95575 * 179.97438 * 5 3 2 7 7 O 1.42899 * 109.47549 * 285.00305 * 6 5 3 8 8 Si 1.86301 * 109.47051 * 165.00061 * 6 5 3 9 9 C 1.37684 * 120.08706 * 359.67658 * 5 3 2 10 10 C 1.39756 * 119.90831 * 0.59848 * 9 5 3 11 11 C 1.47602 * 120.08674 * 179.69744 * 10 9 5 12 12 O 1.21589 * 119.99948 * 359.72446 * 11 10 9 13 13 N 1.34777 * 119.99934 * 179.72572 * 11 10 9 14 14 C 1.46501 * 119.99710 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85495 * 23.80985 * 14 13 11 16 16 C 1.53790 * 113.60986 * 154.99936 * 14 13 11 17 17 C 1.53787 * 87.07928 * 89.11638 * 16 14 13 18 18 H 1.08999 * 113.61250 * 270.79514 * 17 16 14 19 19 C 1.50699 * 113.61268 * 139.97882 * 17 16 14 20 20 C 1.38195 * 119.99538 * 120.00101 * 19 17 16 21 21 C 1.38352 * 119.99091 * 180.02562 * 20 19 17 22 22 Br 1.89100 * 120.00806 * 179.97438 * 21 20 19 23 23 C 1.38298 * 119.97736 * 0.24872 * 21 20 19 24 24 C 1.38238 * 119.99461 * 359.47350 * 23 21 20 25 25 C 1.38219 * 120.00580 * 0.53157 * 24 23 21 26 26 C 1.53780 * 113.61389 * 252.49585 * 14 13 11 27 27 C 1.37716 * 119.95059 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.47070 * 270.02687 * 1 2 3 29 29 H 1.09008 * 109.46695 * 30.01949 * 1 2 3 30 30 H 1.08996 * 109.47358 * 150.02275 * 1 2 3 31 31 H 0.96702 * 113.99837 * 89.99912 * 4 3 2 32 32 H 1.09002 * 109.46903 * 45.00610 * 6 5 3 33 33 H 0.96696 * 114.00069 * 179.97438 * 7 6 5 34 34 H 1.48504 * 109.99794 * 60.00113 * 8 6 5 35 35 H 1.48496 * 110.00334 * 181.32188 * 8 6 5 36 36 H 1.07997 * 120.04778 * 180.31706 * 9 5 3 37 37 H 0.96994 * 120.00006 * 359.97438 * 13 11 10 38 38 H 1.08992 * 113.61785 * 334.56544 * 16 14 13 39 39 H 1.08998 * 113.68668 * 203.67196 * 16 14 13 40 40 H 1.07993 * 120.00195 * 0.02562 * 20 19 17 41 41 H 1.08005 * 120.00484 * 179.72694 * 23 21 20 42 42 H 1.07997 * 120.00206 * 180.29153 * 24 23 21 43 43 H 1.08002 * 119.99191 * 179.76835 * 25 24 23 44 44 H 1.09005 * 113.61316 * 156.33817 * 26 14 13 45 45 H 1.08992 * 113.61332 * 25.43487 * 26 14 13 46 46 H 1.07993 * 120.05190 * 0.04400 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5198 2.3778 -0.0005 5 6 3.5912 1.2094 0.0005 6 6 4.3386 2.5179 0.0000 7 8 4.2726 3.1037 -1.3018 8 14 6.1197 2.2159 0.4554 9 6 4.2860 0.0207 0.0078 10 6 3.5918 -1.1922 0.0020 11 6 4.3327 -2.4688 0.0030 12 8 5.5486 -2.4660 0.0038 13 7 3.6615 -3.6375 0.0029 14 6 4.3969 -4.9046 0.0034 15 1 5.4041 -4.8093 0.4092 16 6 3.6014 -6.0783 0.5989 17 6 3.0627 -6.3301 -0.8194 18 1 2.1500 -5.7782 -1.0441 19 6 2.9669 -7.7906 -1.1783 20 6 1.7438 -8.3415 -1.5106 21 6 1.6559 -9.6825 -1.8395 22 35 -0.0176 -10.4370 -2.2936 23 6 2.7912 -10.4721 -1.8306 24 6 4.0152 -9.9189 -1.5036 25 6 4.1026 -8.5792 -1.1750 26 6 4.3401 -5.6503 -1.3403 27 6 2.1946 -1.1932 0.0005 28 1 -0.3633 0.0005 1.0277 29 1 -0.3633 0.8899 -0.5142 30 1 -0.3634 -0.8901 -0.5135 31 1 1.3220 2.7182 0.8827 32 1 3.8876 3.1943 0.7261 33 1 4.7333 3.9507 -1.3757 34 1 6.7460 1.2951 -0.5270 35 1 6.8604 3.5025 0.4896 36 1 5.3659 0.0257 0.0134 37 1 2.6915 -3.6397 0.0026 38 1 2.8342 -5.7701 1.3090 39 1 4.2288 -6.8853 0.9772 40 1 0.8569 -7.7254 -1.5135 41 1 2.7223 -11.5200 -2.0830 42 1 4.9026 -10.5344 -1.5011 43 1 5.0583 -8.1481 -0.9159 44 1 5.1706 -6.3397 -1.4926 45 1 4.1690 -4.9966 -2.1955 46 1 1.6547 -2.1285 0.0002 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:32 Heat of formation + Delta-G solvation = -23.525690 kcal Electronic energy + Delta-G solvation = -30327.802790 eV Core-core repulsion = 26003.185452 eV Total energy + Delta-G solvation = -4324.617338 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.90813 -41.23132 -40.25031 -38.87455 -37.91461 -37.50582 -34.88627 -34.06343 -33.18921 -32.33623 -31.45376 -30.09422 -27.98673 -27.00997 -26.69629 -26.37762 -24.73753 -23.51566 -22.53981 -21.94297 -21.58770 -20.10020 -19.49740 -18.72012 -18.63377 -17.99177 -17.68340 -16.90313 -16.62560 -16.38399 -16.21108 -16.06420 -16.01722 -15.58132 -15.24225 -15.10133 -14.81332 -14.59683 -14.47901 -14.26055 -14.25176 -14.00145 -13.67840 -13.58931 -13.45333 -13.39918 -12.96538 -12.89512 -12.85257 -12.66195 -12.32372 -12.01658 -11.97808 -11.91453 -11.54060 -11.48494 -11.35824 -11.16488 -11.14690 -10.53419 -10.21683 -9.96751 -9.84464 -9.65051 -9.59702 -5.03054 -0.39535 0.06557 0.10034 0.28595 0.64306 1.18780 1.48598 1.58909 1.87399 1.97607 2.53098 2.58157 3.10252 3.30829 3.44406 3.53774 3.61621 3.64444 3.70083 3.74402 3.88266 3.96517 3.99665 4.10105 4.12424 4.14785 4.29832 4.34346 4.42191 4.43800 4.61810 4.65357 4.67551 4.73648 4.77784 4.84389 4.85115 4.94282 4.98476 5.02380 5.04894 5.09656 5.14825 5.22048 5.22597 5.32745 5.37060 5.46359 5.60604 5.63909 5.84500 6.41911 6.54298 6.77580 7.09544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.121 4.121 3 C 0.159 3.841 4 O -0.495 6.495 5 C -0.120 4.120 6 C -0.064 4.064 7 O -0.553 6.553 8 Si 0.743 3.257 9 C -0.065 4.065 10 C -0.152 4.152 11 C 0.563 3.437 12 O -0.577 6.577 13 N -0.692 5.692 14 C 0.114 3.886 15 H 0.090 0.910 16 C -0.121 4.121 17 C -0.066 4.066 18 H 0.112 0.888 19 C -0.066 4.066 20 C -0.097 4.097 21 C -0.103 4.103 22 Br -0.061 7.061 23 C -0.108 4.108 24 C -0.114 4.114 25 C -0.105 4.105 26 C -0.144 4.144 27 C -0.054 4.054 28 H 0.090 0.910 29 H 0.068 0.932 30 H 0.084 0.916 31 H 0.413 0.587 32 H 0.104 0.896 33 H 0.394 0.606 34 H -0.311 1.311 35 H -0.274 1.274 36 H 0.127 0.873 37 H 0.415 0.585 38 H 0.091 0.909 39 H 0.105 0.895 40 H 0.140 0.860 41 H 0.136 0.864 42 H 0.150 0.850 43 H 0.146 0.854 44 H 0.101 0.899 45 H 0.065 0.935 46 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.002 0.183 5.860 7.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.121 4.121 3 C 0.113 3.887 4 O -0.309 6.309 5 C -0.120 4.120 6 C -0.174 4.174 7 O -0.363 6.363 8 Si 0.650 3.350 9 C -0.084 4.084 10 C -0.155 4.155 11 C 0.351 3.649 12 O -0.458 6.458 13 N -0.344 5.344 14 C 0.008 3.992 15 H 0.109 0.891 16 C -0.159 4.159 17 C -0.085 4.085 18 H 0.130 0.870 19 C -0.067 4.067 20 C -0.117 4.117 21 C -0.182 4.182 22 Br 0.024 6.976 23 C -0.128 4.128 24 C -0.133 4.133 25 C -0.124 4.124 26 C -0.182 4.182 27 C -0.072 4.072 28 H 0.109 0.891 29 H 0.087 0.913 30 H 0.102 0.898 31 H 0.274 0.726 32 H 0.122 0.878 33 H 0.245 0.755 34 H -0.240 1.240 35 H -0.200 1.200 36 H 0.145 0.855 37 H 0.254 0.746 38 H 0.110 0.890 39 H 0.123 0.877 40 H 0.157 0.843 41 H 0.154 0.846 42 H 0.167 0.833 43 H 0.164 0.836 44 H 0.119 0.881 45 H 0.084 0.916 46 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -3.285 -0.620 4.753 5.811 hybrid contribution 0.140 1.039 -0.649 1.233 sum -3.145 0.419 4.104 5.188 Atomic orbital electron populations 1.20771 0.88007 1.04036 1.03925 1.20457 0.98448 0.91640 1.01584 1.18429 0.88464 0.86086 0.95695 1.84730 1.75353 1.35542 1.35239 1.19656 0.93709 0.93931 1.04731 1.24638 1.10049 0.94404 0.88292 1.86588 1.77885 1.41502 1.30362 0.94353 0.73477 0.78530 0.88652 1.21070 1.00226 0.91241 0.95890 1.19772 0.94468 0.92427 1.08867 1.18337 0.86735 0.84499 0.75282 1.90791 1.15322 1.88074 1.51605 1.45435 1.10788 1.04174 1.74029 1.21906 0.97045 0.82537 0.97692 0.89143 1.23380 0.99974 0.96748 0.95786 1.21625 0.99214 0.90639 0.96984 0.86959 1.19840 0.92412 0.96000 0.98481 1.21184 0.98924 0.92978 0.98569 1.21961 0.91976 0.96528 1.07723 1.96758 1.24397 1.84060 1.92375 1.21343 0.91733 1.00417 0.99318 1.21456 0.97647 0.95802 0.98374 1.21446 0.99215 0.93662 0.98030 1.23589 0.98266 0.99123 0.97266 1.21372 0.91458 0.99179 0.95194 0.89114 0.91342 0.89759 0.72568 0.87797 0.75538 1.23998 1.20048 0.85540 0.74600 0.88998 0.87660 0.84266 0.84580 0.83250 0.83611 0.88067 0.91646 0.81732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.74 9.78 71.24 0.70 1.44 16 2 C -0.12 0.26 5.89 -19.81 -0.12 0.14 16 3 C 0.16 0.17 6.66 22.63 0.15 0.32 16 4 O -0.49 0.62 11.84 -90.32 -1.07 -0.45 16 5 C -0.12 -0.44 5.30 -19.81 -0.11 -0.54 16 6 C -0.06 -0.08 2.36 71.23 0.17 0.09 16 7 O -0.55 -2.81 12.86 -148.98 -1.92 -4.72 16 8 Si 0.74 1.56 30.18 68.60 2.07 3.63 16 9 C -0.07 -0.40 8.20 22.51 0.18 -0.21 16 10 C -0.15 -0.47 5.88 -20.08 -0.12 -0.59 16 11 C 0.56 2.97 7.76 86.71 0.67 3.65 16 12 O -0.58 -8.19 15.94 -4.00 -0.06 -8.26 16 13 N -0.69 1.79 5.21 -443.12 -2.31 -0.51 16 14 C 0.11 -0.31 4.32 45.52 0.20 -0.12 16 15 H 0.09 0.14 7.46 -2.39 -0.02 0.12 16 16 C -0.12 0.89 7.29 31.13 0.23 1.11 16 17 C -0.07 0.42 3.86 -11.01 -0.04 0.38 16 18 H 0.11 -0.98 8.09 -2.39 -0.02 -1.00 16 19 C -0.07 0.19 5.29 -19.87 -0.11 0.09 16 20 C -0.10 0.06 9.45 22.29 0.21 0.27 16 21 C -0.10 -0.17 6.22 22.31 0.14 -0.03 16 22 Br -0.06 -0.16 33.70 -20.37 -0.69 -0.85 16 23 C -0.11 -0.03 9.79 22.28 0.22 0.19 16 24 C -0.11 0.26 10.05 22.27 0.22 0.49 16 25 C -0.11 0.35 8.61 22.27 0.19 0.54 16 26 C -0.14 0.51 7.25 31.12 0.23 0.74 16 27 C -0.05 0.17 9.18 22.50 0.21 0.37 16 28 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 29 H 0.07 -0.28 7.52 -2.38 -0.02 -0.30 16 30 H 0.08 -0.76 8.08 -2.39 -0.02 -0.78 16 31 H 0.41 -4.69 9.06 -74.06 -0.67 -5.36 16 32 H 0.10 -0.49 7.82 -2.39 -0.02 -0.51 16 33 H 0.39 -1.28 8.74 -74.06 -0.65 -1.93 16 34 H -0.31 -3.79 6.76 99.48 0.67 -3.12 16 35 H -0.27 -1.24 7.11 99.48 0.71 -0.53 16 36 H 0.13 1.14 4.47 -2.91 -0.01 1.13 16 37 H 0.42 -3.79 6.72 -92.71 -0.62 -4.41 16 38 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 39 H 0.11 -0.81 7.72 -2.39 -0.02 -0.83 16 40 H 0.14 -0.43 8.05 -2.91 -0.02 -0.45 16 41 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 42 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 43 H 0.15 -1.00 6.66 -2.91 -0.02 -1.02 16 44 H 0.10 -0.45 6.31 -2.38 -0.02 -0.46 16 45 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 46 H 0.17 -1.78 6.39 -2.91 -0.02 -1.79 16 Total: 0.00 -25.50 400.40 -1.62 -27.12 By element: Atomic # 1 Polarization: -23.40 SS G_CDS: -0.87 Total: -24.27 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 3.23 Total: 8.31 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -2.31 Total: -0.51 kcal Atomic # 8 Polarization: -10.37 SS G_CDS: -3.05 Total: -13.42 kcal Atomic # 14 Polarization: 1.56 SS G_CDS: 2.07 Total: 3.63 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.69 Total: -0.85 kcal Total: -25.50 -1.62 -27.12 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.592 kcal (2) G-P(sol) polarization free energy of solvation -25.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.118 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds