Wall clock time and date at job start Tue Mar 9 2021 14:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46979 * 2 1 4 4 C 1.50701 * 109.47533 * 120.00102 * 2 1 3 5 5 C 1.34850 * 125.89332 * 244.97888 * 4 2 1 6 6 C 1.40882 * 107.41638 * 180.02562 * 5 4 2 7 7 C 1.34851 * 107.42101 * 359.97438 * 6 5 4 8 8 C 1.50699 * 125.89169 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47304 * 85.02431 * 8 7 6 10 10 O 1.21280 * 120.00487 * 359.97438 * 9 8 7 11 11 N 1.34781 * 119.99783 * 180.02562 * 9 8 7 12 12 C 1.46504 * 119.99665 * 179.97438 * 11 9 8 13 13 H 1.08999 * 112.85136 * 336.19533 * 12 11 9 14 14 C 1.53779 * 113.61484 * 107.49929 * 12 11 9 15 15 C 1.53785 * 87.08093 * 89.11287 * 14 12 11 16 16 H 1.09002 * 113.61570 * 270.88522 * 15 14 12 17 17 C 1.50701 * 113.69000 * 139.98979 * 15 14 12 18 18 C 1.38219 * 119.99655 * 320.66034 * 17 15 14 19 19 C 1.38261 * 120.01887 * 179.76347 * 18 17 15 20 20 C 1.38191 * 120.01178 * 0.51366 * 19 18 17 21 21 C 1.38350 * 119.98957 * 359.74341 * 20 19 18 22 22 Br 1.89102 * 120.01095 * 179.97438 * 21 20 19 23 23 C 1.38238 * 119.99231 * 140.93737 * 17 15 14 24 24 C 1.53781 * 87.08241 * 25.43228 * 15 14 12 25 25 N 1.36341 * 108.21546 * 0.26262 * 7 6 5 26 26 H 0.96700 * 113.99962 * 299.99564 * 1 2 3 27 27 H 1.09002 * 109.47379 * 240.00270 * 2 1 3 28 28 H 1.48502 * 109.99715 * 178.67919 * 3 2 1 29 29 H 1.48495 * 109.99967 * 300.00070 * 3 2 1 30 30 H 1.07996 * 126.28910 * 0.03600 * 5 4 2 31 31 H 1.08008 * 126.29215 * 180.02562 * 6 5 4 32 32 H 1.09003 * 109.47068 * 325.02325 * 8 7 6 33 33 H 1.09007 * 109.46773 * 205.02568 * 8 7 6 34 34 H 0.96996 * 120.00382 * 359.97438 * 11 9 8 35 35 H 1.09003 * 113.61775 * 334.57164 * 14 12 11 36 36 H 1.08996 * 113.61960 * 203.65890 * 14 12 11 37 37 H 1.08002 * 119.98975 * 0.02562 * 18 17 15 38 38 H 1.08004 * 119.99585 * 180.27519 * 19 18 17 39 39 H 1.08005 * 120.00840 * 179.76235 * 20 19 18 40 40 H 1.07999 * 120.01021 * 359.95440 * 23 17 15 41 41 H 1.09005 * 113.61302 * 89.11252 * 24 15 14 42 42 H 1.08996 * 113.61527 * 219.93415 * 24 15 14 43 43 H 0.97001 * 125.63714 * 179.73600 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6306 -0.1488 2.2375 6 6 2.8986 -1.1607 3.1804 7 6 2.3525 -2.3020 2.7140 8 6 2.3927 -3.6445 3.3975 9 6 1.2611 -3.7379 4.3883 10 8 0.4973 -2.8060 4.5262 11 7 1.0984 -4.8568 5.1219 12 6 -0.0015 -4.9473 6.0855 13 1 -0.3496 -3.9713 6.4234 14 6 -1.1344 -5.8873 5.6406 15 6 -0.3611 -7.0202 6.3359 16 1 0.3589 -7.5195 5.6875 17 6 -1.2441 -7.9862 7.0831 18 6 -2.3328 -7.5186 7.7948 19 6 -3.1461 -8.4050 8.4764 20 6 -2.8646 -9.7577 8.4552 21 6 -1.7719 -10.2257 7.7474 22 35 -1.3857 -12.0767 7.7185 23 6 -0.9617 -9.3393 7.0613 24 6 0.2638 -5.9377 7.2317 25 7 1.7622 -2.0331 1.5147 26 1 -0.3933 0.4416 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0322 29 1 1.5614 2.4679 -1.2084 30 1 2.9300 0.8864 2.3082 31 1 3.4410 -1.0437 4.1070 32 1 3.3429 -3.7581 3.9195 33 1 2.2903 -4.4343 2.6533 34 1 1.7094 -5.6020 5.0119 35 1 -1.2041 -6.0060 4.5593 36 1 -2.0946 -5.6646 6.1058 37 1 -2.5508 -6.4610 7.8149 38 1 -3.9993 -8.0396 9.0287 39 1 -3.4977 -10.4497 8.9909 40 1 -0.1088 -9.7042 6.5083 41 1 -0.3142 -5.7286 8.1319 42 1 1.3224 -6.0977 7.4361 43 1 1.2968 -2.6760 0.9571 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:49:33 Heat of formation + Delta-G solvation = 31.732249 kcal Electronic energy + Delta-G solvation = -26311.389350 eV Core-core repulsion = 22370.650598 eV Total energy + Delta-G solvation = -3940.738752 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.31067 -41.63262 -40.30981 -38.87282 -37.63068 -34.69731 -33.34415 -33.01152 -32.03584 -31.85207 -30.18744 -29.35848 -26.88243 -26.44595 -25.10272 -23.65541 -22.79730 -22.06572 -21.29096 -20.97787 -20.17529 -18.88670 -18.49977 -17.90255 -17.30035 -16.90373 -16.50774 -16.40888 -16.23592 -16.09368 -15.36840 -15.18852 -15.14510 -14.78400 -14.60596 -14.53510 -14.40420 -14.13394 -14.04830 -13.87568 -13.71269 -13.61858 -13.39716 -12.98359 -12.79920 -12.44494 -12.08063 -12.06014 -12.00377 -11.89742 -11.62721 -11.44744 -11.20572 -10.91958 -10.58097 -10.14752 -9.93672 -9.71512 -9.67459 -8.90396 -4.94116 0.01909 0.18545 0.62137 1.15192 1.30036 1.58352 1.71549 1.90284 1.96860 2.25057 2.47638 2.50322 3.28509 3.46207 3.49223 3.52684 3.60909 3.71826 3.79369 3.85283 3.90138 3.94153 3.97474 3.99514 4.15972 4.30527 4.32751 4.41855 4.49729 4.54073 4.57300 4.58833 4.71782 4.79469 4.82526 4.83659 4.85553 4.97951 5.12862 5.25290 5.31949 5.35522 5.38304 5.51607 5.71844 6.05872 6.19989 6.37907 6.56848 6.65966 7.17885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.172 4.172 7 C 0.035 3.965 8 C -0.072 4.072 9 C 0.514 3.486 10 O -0.519 6.519 11 N -0.717 5.717 12 C 0.121 3.879 13 H 0.106 0.894 14 C -0.143 4.143 15 C -0.074 4.074 16 H 0.099 0.901 17 C -0.065 4.065 18 C -0.102 4.102 19 C -0.109 4.109 20 C -0.095 4.095 21 C -0.088 4.088 22 Br -0.050 7.050 23 C -0.088 4.088 24 C -0.135 4.135 25 N -0.535 5.535 26 H 0.383 0.617 27 H 0.109 0.891 28 H -0.255 1.255 29 H -0.256 1.256 30 H 0.142 0.858 31 H 0.136 0.864 32 H 0.118 0.882 33 H 0.099 0.901 34 H 0.401 0.599 35 H 0.074 0.926 36 H 0.096 0.904 37 H 0.130 0.870 38 H 0.133 0.867 39 H 0.133 0.867 40 H 0.131 0.869 41 H 0.099 0.901 42 H 0.079 0.921 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.286 -0.881 2.130 2.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.619 3.381 4 C -0.124 4.124 5 C -0.212 4.212 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.113 4.113 9 C 0.300 3.700 10 O -0.393 6.393 11 N -0.369 5.369 12 C 0.015 3.985 13 H 0.124 0.876 14 C -0.182 4.182 15 C -0.092 4.092 16 H 0.117 0.883 17 C -0.066 4.066 18 C -0.120 4.120 19 C -0.128 4.128 20 C -0.115 4.115 21 C -0.167 4.167 22 Br 0.036 6.964 23 C -0.108 4.108 24 C -0.173 4.173 25 N -0.130 5.130 26 H 0.231 0.769 27 H 0.126 0.874 28 H -0.179 1.179 29 H -0.181 1.181 30 H 0.159 0.841 31 H 0.154 0.846 32 H 0.136 0.864 33 H 0.118 0.882 34 H 0.236 0.764 35 H 0.093 0.907 36 H 0.114 0.886 37 H 0.148 0.852 38 H 0.151 0.849 39 H 0.151 0.849 40 H 0.149 0.851 41 H 0.117 0.883 42 H 0.097 0.903 43 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 1.376 -0.698 1.134 1.915 hybrid contribution 0.016 -1.257 -0.340 1.302 sum 1.392 -1.956 0.794 2.528 Atomic orbital electron populations 1.86468 1.17307 1.81885 1.49550 1.24826 0.85045 1.10677 0.95461 0.93982 0.80871 0.76634 0.86601 1.20850 1.07138 0.84374 1.00005 1.20643 1.05572 0.99497 0.95480 1.20588 1.06529 0.91680 1.00897 1.19462 1.03786 0.95849 0.88794 1.20130 0.99198 0.94477 0.97464 1.20607 0.85968 0.82070 0.81347 1.90770 1.45079 1.37172 1.66283 1.45685 1.31868 1.18148 1.41196 1.21826 0.87495 0.99860 0.89297 0.87559 1.23569 0.98356 0.94763 1.01494 1.21617 0.97149 0.93261 0.97189 0.88276 1.19687 0.96028 0.93121 0.97795 1.21176 0.94279 1.00299 0.96252 1.21205 0.99805 0.92579 0.99234 1.21177 0.95872 0.96375 0.98076 1.21847 0.99904 0.90977 1.03981 1.96785 1.94739 1.06707 1.98195 1.21019 0.98984 0.92273 0.98507 1.23436 1.02202 0.94327 0.97349 1.41798 1.44243 1.09119 1.17852 0.76936 0.87395 1.17912 1.18061 0.84061 0.84565 0.86431 0.88246 0.76431 0.90694 0.88612 0.85185 0.84890 0.84943 0.85099 0.88271 0.90283 0.75152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.66 12.88 -35.23 -0.45 -1.11 16 2 C -0.05 -0.03 3.08 36.01 0.11 0.08 16 3 Si 0.72 -0.36 30.60 -169.99 -5.20 -5.56 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.33 9.37 -39.78 -0.37 -0.70 16 6 C -0.17 -0.35 10.76 -39.78 -0.43 -0.78 16 7 C 0.03 0.04 5.66 -81.79 -0.46 -0.42 16 8 C -0.07 0.15 6.24 -29.04 -0.18 -0.03 16 9 C 0.51 0.08 7.82 -10.99 -0.09 -0.01 16 10 O -0.52 -2.50 15.63 5.56 0.09 -2.42 16 11 N -0.72 1.78 5.26 -53.01 -0.28 1.50 16 12 C 0.12 -0.22 4.32 -67.11 -0.29 -0.51 16 13 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 14 C -0.14 0.30 7.26 -25.92 -0.19 0.11 16 15 C -0.07 0.21 3.85 -90.96 -0.35 -0.14 16 16 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 17 C -0.07 0.08 5.29 -104.63 -0.55 -0.48 16 18 C -0.10 0.14 8.53 -39.58 -0.34 -0.20 16 19 C -0.11 0.11 10.05 -39.59 -0.40 -0.29 16 20 C -0.10 0.00 9.79 -39.56 -0.39 -0.39 16 21 C -0.09 -0.06 6.22 -39.51 -0.25 -0.31 16 22 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.35 16 23 C -0.09 0.02 9.45 -39.56 -0.37 -0.36 16 24 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 25 N -0.54 -0.60 6.07 -5.44 -0.03 -0.63 16 26 H 0.38 -0.74 8.70 45.56 0.40 -0.35 16 27 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 28 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 29 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 30 H 0.14 -0.02 6.24 -52.49 -0.33 -0.34 16 31 H 0.14 0.12 8.06 -52.48 -0.42 -0.31 16 32 H 0.12 -0.50 8.14 -51.93 -0.42 -0.92 16 33 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 34 H 0.40 -2.08 8.70 -40.82 -0.36 -2.44 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.10 -0.22 6.41 -51.93 -0.33 -0.55 16 37 H 0.13 -0.38 6.73 -52.49 -0.35 -0.74 16 38 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 39 H 0.13 -0.13 8.06 -52.48 -0.42 -0.56 16 40 H 0.13 -0.17 8.05 -52.49 -0.42 -0.59 16 41 H 0.10 -0.31 7.62 -51.93 -0.40 -0.71 16 42 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.41 -0.19 8.96 -40.82 -0.37 -0.56 16 LS Contribution 381.52 15.07 5.75 5.75 Total: 0.00 -9.03 381.52 -13.22 -22.25 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -5.53 Total: -12.70 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -5.27 Total: -4.74 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.31 Total: 0.87 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.37 Total: -3.53 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.20 Total: -5.56 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.03 -13.22 -22.25 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.981 kcal (2) G-P(sol) polarization free energy of solvation -9.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.249 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds