Wall clock time and date at job start Tue Mar 9 2021 14:49:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46979 * 2 1 4 4 C 1.50701 * 109.47533 * 120.00102 * 2 1 3 5 5 C 1.34850 * 125.89332 * 244.97888 * 4 2 1 6 6 C 1.40882 * 107.41638 * 180.02562 * 5 4 2 7 7 C 1.34851 * 107.42101 * 359.97438 * 6 5 4 8 8 C 1.50699 * 125.89169 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47304 * 85.02431 * 8 7 6 10 10 O 1.21280 * 120.00487 * 359.97438 * 9 8 7 11 11 N 1.34781 * 119.99783 * 180.02562 * 9 8 7 12 12 C 1.46504 * 119.99665 * 179.97438 * 11 9 8 13 13 H 1.08999 * 112.85136 * 336.19533 * 12 11 9 14 14 C 1.53779 * 113.61484 * 107.49929 * 12 11 9 15 15 C 1.53785 * 87.08093 * 89.11287 * 14 12 11 16 16 H 1.09002 * 113.61570 * 270.88522 * 15 14 12 17 17 C 1.50701 * 113.69000 * 139.98979 * 15 14 12 18 18 C 1.38219 * 119.99655 * 320.66034 * 17 15 14 19 19 C 1.38261 * 120.01887 * 179.76347 * 18 17 15 20 20 C 1.38191 * 120.01178 * 0.51366 * 19 18 17 21 21 C 1.38350 * 119.98957 * 359.74341 * 20 19 18 22 22 Br 1.89102 * 120.01095 * 179.97438 * 21 20 19 23 23 C 1.38238 * 119.99231 * 140.93737 * 17 15 14 24 24 C 1.53781 * 87.08241 * 25.43228 * 15 14 12 25 25 N 1.36341 * 108.21546 * 0.26262 * 7 6 5 26 26 H 0.96700 * 113.99962 * 299.99564 * 1 2 3 27 27 H 1.09002 * 109.47379 * 240.00270 * 2 1 3 28 28 H 1.48502 * 109.99715 * 178.67919 * 3 2 1 29 29 H 1.48495 * 109.99967 * 300.00070 * 3 2 1 30 30 H 1.07996 * 126.28910 * 0.03600 * 5 4 2 31 31 H 1.08008 * 126.29215 * 180.02562 * 6 5 4 32 32 H 1.09003 * 109.47068 * 325.02325 * 8 7 6 33 33 H 1.09007 * 109.46773 * 205.02568 * 8 7 6 34 34 H 0.96996 * 120.00382 * 359.97438 * 11 9 8 35 35 H 1.09003 * 113.61775 * 334.57164 * 14 12 11 36 36 H 1.08996 * 113.61960 * 203.65890 * 14 12 11 37 37 H 1.08002 * 119.98975 * 0.02562 * 18 17 15 38 38 H 1.08004 * 119.99585 * 180.27519 * 19 18 17 39 39 H 1.08005 * 120.00840 * 179.76235 * 20 19 18 40 40 H 1.07999 * 120.01021 * 359.95440 * 23 17 15 41 41 H 1.09005 * 113.61302 * 89.11252 * 24 15 14 42 42 H 1.08996 * 113.61527 * 219.93415 * 24 15 14 43 43 H 0.97001 * 125.63714 * 179.73600 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6306 -0.1488 2.2375 6 6 2.8986 -1.1607 3.1804 7 6 2.3525 -2.3020 2.7140 8 6 2.3927 -3.6445 3.3975 9 6 1.2611 -3.7379 4.3883 10 8 0.4973 -2.8060 4.5262 11 7 1.0984 -4.8568 5.1219 12 6 -0.0015 -4.9473 6.0855 13 1 -0.3496 -3.9713 6.4234 14 6 -1.1344 -5.8873 5.6406 15 6 -0.3611 -7.0202 6.3359 16 1 0.3589 -7.5195 5.6875 17 6 -1.2441 -7.9862 7.0831 18 6 -2.3328 -7.5186 7.7948 19 6 -3.1461 -8.4050 8.4764 20 6 -2.8646 -9.7577 8.4552 21 6 -1.7719 -10.2257 7.7474 22 35 -1.3857 -12.0767 7.7185 23 6 -0.9617 -9.3393 7.0613 24 6 0.2638 -5.9377 7.2317 25 7 1.7622 -2.0331 1.5147 26 1 -0.3933 0.4416 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0322 29 1 1.5614 2.4679 -1.2084 30 1 2.9300 0.8864 2.3082 31 1 3.4410 -1.0437 4.1070 32 1 3.3429 -3.7581 3.9195 33 1 2.2903 -4.4343 2.6533 34 1 1.7094 -5.6020 5.0119 35 1 -1.2041 -6.0060 4.5593 36 1 -2.0946 -5.6646 6.1058 37 1 -2.5508 -6.4610 7.8149 38 1 -3.9993 -8.0396 9.0287 39 1 -3.4977 -10.4497 8.9909 40 1 -0.1088 -9.7042 6.5083 41 1 -0.3142 -5.7286 8.1319 42 1 1.3224 -6.0977 7.4361 43 1 1.2968 -2.6760 0.9571 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:49:32 Heat of formation + Delta-G solvation = 33.795943 kcal Electronic energy + Delta-G solvation = -26311.299862 eV Core-core repulsion = 22370.650598 eV Total energy + Delta-G solvation = -3940.649264 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.33208 -41.51802 -40.27565 -38.80302 -37.68573 -34.65744 -33.30026 -32.94889 -31.97092 -31.88594 -30.14831 -29.33812 -26.68650 -26.33553 -25.10136 -23.55737 -22.70880 -22.01868 -21.34712 -20.99797 -20.03663 -18.91279 -18.41552 -17.81540 -17.24419 -16.84060 -16.45451 -16.36968 -16.16141 -16.06610 -15.32027 -15.17187 -15.11176 -14.73340 -14.55233 -14.50728 -14.32527 -14.14423 -14.07670 -13.88897 -13.63552 -13.43991 -13.34147 -12.87649 -12.72099 -12.33261 -12.10527 -12.00210 -11.98998 -11.91196 -11.53590 -11.36814 -11.15645 -10.97126 -10.63234 -10.05785 -9.85646 -9.78769 -9.61269 -8.95549 -4.93255 0.08772 0.27418 0.63117 1.11567 1.29228 1.62489 1.68806 1.89023 1.92209 2.30248 2.51915 2.56771 3.46596 3.51100 3.61411 3.68372 3.71046 3.81859 3.88058 3.95961 4.04977 4.11219 4.11357 4.21727 4.28839 4.37272 4.41480 4.50281 4.62227 4.65575 4.68877 4.77356 4.80985 4.87842 4.94128 4.99330 5.02139 5.16214 5.21766 5.26737 5.30257 5.36185 5.49762 5.66304 5.83396 6.01074 6.14626 6.54021 6.65374 6.67981 7.28197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.054 4.054 3 Si 0.802 3.198 4 C -0.023 4.023 5 C -0.201 4.201 6 C -0.200 4.200 7 C 0.032 3.968 8 C -0.068 4.068 9 C 0.514 3.486 10 O -0.573 6.573 11 N -0.702 5.702 12 C 0.117 3.883 13 H 0.084 0.916 14 C -0.142 4.142 15 C -0.065 4.065 16 H 0.112 0.888 17 C -0.067 4.067 18 C -0.106 4.106 19 C -0.114 4.114 20 C -0.109 4.109 21 C -0.103 4.103 22 Br -0.061 7.061 23 C -0.097 4.097 24 C -0.124 4.124 25 N -0.538 5.538 26 H 0.395 0.605 27 H 0.106 0.894 28 H -0.285 1.285 29 H -0.293 1.293 30 H 0.154 0.846 31 H 0.142 0.858 32 H 0.144 0.856 33 H 0.127 0.873 34 H 0.417 0.583 35 H 0.066 0.934 36 H 0.096 0.904 37 H 0.145 0.855 38 H 0.150 0.850 39 H 0.137 0.863 40 H 0.139 0.861 41 H 0.100 0.900 42 H 0.089 0.911 43 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.774 -1.396 2.427 3.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.164 4.164 3 Si 0.706 3.294 4 C -0.136 4.136 5 C -0.226 4.226 6 C -0.224 4.224 7 C -0.082 4.082 8 C -0.108 4.108 9 C 0.301 3.699 10 O -0.451 6.451 11 N -0.354 5.354 12 C 0.011 3.989 13 H 0.102 0.898 14 C -0.180 4.180 15 C -0.084 4.084 16 H 0.131 0.869 17 C -0.068 4.068 18 C -0.124 4.124 19 C -0.133 4.133 20 C -0.128 4.128 21 C -0.182 4.182 22 Br 0.024 6.976 23 C -0.117 4.117 24 C -0.162 4.162 25 N -0.133 5.133 26 H 0.245 0.755 27 H 0.124 0.876 28 H -0.211 1.211 29 H -0.221 1.221 30 H 0.171 0.829 31 H 0.159 0.841 32 H 0.161 0.839 33 H 0.145 0.855 34 H 0.255 0.745 35 H 0.085 0.915 36 H 0.114 0.886 37 H 0.163 0.837 38 H 0.168 0.832 39 H 0.154 0.846 40 H 0.157 0.843 41 H 0.119 0.881 42 H 0.107 0.893 43 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges 1.866 -1.270 1.453 2.685 hybrid contribution -0.161 -1.096 -0.426 1.187 sum 1.706 -2.366 1.027 3.092 Atomic orbital electron populations 1.86431 1.17647 1.82286 1.50514 1.24974 0.84866 1.11447 0.95105 0.92923 0.77743 0.74404 0.84369 1.20996 1.07489 0.84792 1.00322 1.20925 1.05729 1.00289 0.95636 1.20858 1.07661 0.92405 1.01497 1.19932 1.02678 0.97031 0.88578 1.20251 0.99370 0.93625 0.97537 1.20976 0.85764 0.81750 0.81381 1.90753 1.47162 1.39133 1.68074 1.45566 1.31686 1.17996 1.40167 1.21786 0.87947 0.99038 0.90094 0.89818 1.23549 0.98441 0.94983 1.01042 1.21611 0.96926 0.92726 0.97090 0.86946 1.19865 0.96235 0.93010 0.97679 1.21433 0.94056 1.01104 0.95778 1.21459 1.00360 0.92226 0.99228 1.21346 0.96005 0.97088 0.98395 1.21969 1.00681 0.90584 1.04964 1.96759 1.94810 1.07765 1.98262 1.21186 0.99249 0.92627 0.98631 1.23379 1.02854 0.93192 0.96804 1.41905 1.44162 1.09177 1.18097 0.75501 0.87628 1.21123 1.22107 0.82895 0.84054 0.83861 0.85546 0.74508 0.91484 0.88568 0.83701 0.83236 0.84559 0.84314 0.88134 0.89253 0.74495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.55 12.88 -148.98 -1.92 -3.46 16 2 C -0.05 -0.09 3.08 71.24 0.22 0.13 16 3 Si 0.80 -0.35 30.60 68.60 2.10 1.75 16 4 C -0.02 -0.08 6.50 41.08 0.27 0.19 16 5 C -0.20 -0.82 9.37 22.14 0.21 -0.61 16 6 C -0.20 -0.89 10.76 22.14 0.24 -0.65 16 7 C 0.03 0.06 5.66 41.08 0.23 0.30 16 8 C -0.07 0.37 6.24 29.10 0.18 0.56 16 9 C 0.51 -0.06 7.82 87.66 0.69 0.63 16 10 O -0.57 -6.03 15.63 -3.03 -0.05 -6.07 16 11 N -0.70 4.19 5.26 -440.02 -2.32 1.87 16 12 C 0.12 -0.48 4.32 45.52 0.20 -0.28 16 13 H 0.08 0.10 7.46 -2.39 -0.02 0.08 16 14 C -0.14 0.67 7.26 31.12 0.23 0.89 16 15 C -0.07 0.45 3.85 -11.01 -0.04 0.41 16 16 H 0.11 -1.05 8.09 -2.39 -0.02 -1.07 16 17 C -0.07 0.21 5.29 -19.87 -0.11 0.11 16 18 C -0.11 0.36 8.53 22.27 0.19 0.55 16 19 C -0.11 0.28 10.05 22.26 0.22 0.50 16 20 C -0.11 -0.02 9.79 22.29 0.22 0.20 16 21 C -0.10 -0.16 6.22 22.31 0.14 -0.02 16 22 Br -0.06 -0.16 33.70 -20.37 -0.69 -0.84 16 23 C -0.10 0.08 9.45 22.29 0.21 0.29 16 24 C -0.12 0.94 7.29 31.12 0.23 1.16 16 25 N -0.54 -1.28 6.07 -171.12 -1.04 -2.32 16 26 H 0.39 -1.41 8.70 -74.06 -0.64 -2.06 16 27 H 0.11 0.17 7.96 -2.39 -0.02 0.16 16 28 H -0.28 -1.28 7.11 99.48 0.71 -0.57 16 29 H -0.29 -1.70 7.11 99.48 0.71 -1.00 16 30 H 0.15 0.03 6.24 -2.91 -0.02 0.01 16 31 H 0.14 0.32 8.06 -2.91 -0.02 0.29 16 32 H 0.14 -1.53 8.14 -2.39 -0.02 -1.55 16 33 H 0.13 -1.38 8.14 -2.38 -0.02 -1.40 16 34 H 0.42 -5.19 8.70 -92.71 -0.81 -5.99 16 35 H 0.07 -0.19 8.14 -2.39 -0.02 -0.20 16 36 H 0.10 -0.46 6.41 -2.39 -0.02 -0.48 16 37 H 0.15 -1.00 6.73 -2.91 -0.02 -1.02 16 38 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 39 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 40 H 0.14 -0.44 8.05 -2.91 -0.02 -0.46 16 41 H 0.10 -0.74 7.62 -2.38 -0.02 -0.76 16 42 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 43 H 0.42 -0.36 8.96 -92.71 -0.83 -1.20 16 Total: 0.00 -22.44 381.52 -1.56 -24.00 By element: Atomic # 1 Polarization: -18.10 SS G_CDS: -1.17 Total: -19.26 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: 3.52 Total: 4.35 kcal Atomic # 7 Polarization: 2.90 SS G_CDS: -3.36 Total: -0.45 kcal Atomic # 8 Polarization: -7.57 SS G_CDS: -1.97 Total: -9.54 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: 2.10 Total: 1.75 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.69 Total: -0.84 kcal Total: -22.44 -1.56 -24.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.792 kcal (2) G-P(sol) polarization free energy of solvation -22.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.996 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds