Wall clock time and date at job start Tue Mar 9 2021 14:51:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46901 * 111.00411 * 2 1 4 4 C 1.50704 * 109.46501 * 66.04745 * 3 2 1 5 5 O 1.21274 * 120.00240 * 0.02562 * 4 3 2 6 6 N 1.34783 * 119.99529 * 180.02562 * 4 3 2 7 7 C 1.46490 * 119.99860 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.85259 * 23.80423 * 7 6 4 9 9 C 1.53788 * 113.61681 * 154.99955 * 7 6 4 10 10 C 1.53785 * 87.07714 * 89.11659 * 9 7 6 11 11 H 1.09004 * 113.61052 * 270.79949 * 10 9 7 12 12 C 1.50705 * 113.61109 * 139.98706 * 10 9 7 13 13 C 1.38199 * 119.99407 * 300.23087 * 12 10 9 14 14 C 1.38339 * 119.98710 * 180.27995 * 13 12 10 15 15 Br 1.89100 * 120.00996 * 179.72372 * 14 13 12 16 16 C 1.38306 * 119.98475 * 359.73668 * 14 13 12 17 17 C 1.38244 * 119.98412 * 0.02562 * 16 14 13 18 18 C 1.38219 * 120.01249 * 359.97438 * 17 16 14 19 19 C 1.53773 * 87.08248 * 25.43354 * 10 9 7 20 20 C 1.39683 * 110.99770 * 236.04632 * 2 1 3 21 21 C 1.38886 * 120.07371 * 243.95132 * 20 2 1 22 22 C 1.50702 * 120.04007 * 0.02562 * 21 20 2 23 23 O 1.42900 * 109.46902 * 284.99682 * 22 21 20 24 24 Si 1.86303 * 109.47034 * 164.99656 * 22 21 20 25 25 C 1.38131 * 119.92360 * 179.97438 * 21 20 2 26 26 C 1.38260 * 120.07118 * 0.02647 * 25 21 20 27 27 C 1.50700 * 119.92250 * 179.97438 * 26 25 21 28 28 F 1.39900 * 109.47272 * 89.99800 * 27 26 25 29 29 F 1.39899 * 109.47144 * 210.00300 * 27 26 25 30 30 F 1.39899 * 109.47095 * 329.99822 * 27 26 25 31 31 C 1.38308 * 120.15445 * 359.97438 * 26 25 21 32 32 C 1.38082 * 120.06960 * 359.74288 * 31 26 25 33 33 H 1.08993 * 109.47369 * 59.99778 * 1 2 3 34 34 H 1.09002 * 109.47014 * 179.97438 * 1 2 3 35 35 H 1.09001 * 109.46781 * 299.99767 * 1 2 3 36 36 H 1.09002 * 109.46639 * 306.05012 * 3 2 1 37 37 H 1.08999 * 109.47069 * 186.04696 * 3 2 1 38 38 H 0.97003 * 119.99500 * 359.97438 * 6 4 3 39 39 H 1.08999 * 113.60942 * 334.57303 * 9 7 6 40 40 H 1.08996 * 113.68996 * 203.67550 * 9 7 6 41 41 H 1.08002 * 120.00119 * 0.02562 * 13 12 10 42 42 H 1.07999 * 120.00964 * 179.97438 * 16 14 13 43 43 H 1.08000 * 119.98859 * 180.02562 * 17 16 14 44 44 H 1.08002 * 119.98676 * 179.97438 * 18 17 16 45 45 H 1.09004 * 113.61253 * 89.11601 * 19 10 9 46 46 H 1.08999 * 113.61761 * 220.01387 * 19 10 9 47 47 H 1.09001 * 109.47045 * 44.99402 * 22 21 20 48 48 H 0.96699 * 113.99744 * 60.00145 * 23 22 21 49 49 H 1.48507 * 109.99620 * 178.67984 * 24 22 21 50 50 H 1.48494 * 110.00060 * 299.99733 * 24 22 21 51 51 H 1.08001 * 119.95977 * 180.02562 * 25 21 20 52 52 H 1.07993 * 119.96179 * 180.02562 * 31 26 25 53 53 H 1.08006 * 120.03198 * 180.27377 * 32 31 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0470 1.2985 5 8 1.0055 1.4452 2.1411 6 7 2.0182 3.3201 1.5234 7 6 1.6692 3.9770 2.7854 8 1 1.4878 3.2699 3.5948 9 6 2.6232 5.1207 3.1690 10 6 1.7009 6.0537 2.3666 11 1 1.9701 6.1337 1.3134 12 6 1.4839 7.3949 3.0187 13 6 0.9206 7.4675 4.2786 14 6 0.7162 8.6991 4.8747 15 35 -0.0618 8.7996 6.5953 16 6 1.0806 9.8569 4.2117 17 6 1.6486 9.7829 2.9535 18 6 1.8526 8.5523 2.3583 19 6 0.5727 5.0455 2.6411 20 6 1.9695 -0.7284 -1.0817 21 6 2.7116 -1.8813 -0.8607 22 6 2.9777 -2.3490 0.5470 23 8 3.9737 -1.5169 1.1450 24 14 3.5800 -4.1116 0.5123 25 6 3.2047 -2.5995 -1.9327 26 6 2.9605 -2.1714 -3.2245 27 6 3.5005 -2.9572 -4.3915 28 9 2.5613 -3.9180 -4.7814 29 9 3.7525 -2.0906 -5.4605 30 9 4.6891 -3.5924 -4.0161 31 6 2.2219 -1.0236 -3.4481 32 6 1.7211 -0.3043 -2.3811 33 1 -0.3634 0.5138 -0.8899 34 1 -0.3633 -1.0277 -0.0005 35 1 -0.3633 0.5138 0.8900 36 1 1.5611 1.9273 -0.8309 37 1 3.0798 1.3443 -0.1083 38 1 2.5235 3.8012 0.8496 39 1 3.6206 5.0192 2.7413 40 1 2.6405 5.3368 4.2372 41 1 0.6363 6.5631 4.7960 42 1 0.9208 10.8186 4.6765 43 1 1.9336 10.6870 2.4359 44 1 2.2960 8.4950 1.3751 45 1 0.0284 5.2402 3.5652 46 1 -0.0853 4.8833 1.7874 47 1 2.0581 -2.2906 1.1292 48 1 3.7272 -0.5833 1.1963 49 1 3.8764 -4.5742 1.8921 50 1 2.5531 -4.9871 -0.1073 51 1 3.7815 -3.4964 -1.7615 52 1 2.0327 -0.6923 -4.4584 53 1 1.1407 0.5895 -2.5566 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:51:35 Heat of formation + Delta-G solvation = -106.017304 kcal Electronic energy + Delta-G solvation = -42368.378139 eV Core-core repulsion = 36418.465193 eV Total energy + Delta-G solvation = -5949.912945 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 499.076 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -51.18000 -48.69010 -48.65612 -41.88992 -41.40048 -40.34254 -38.95935 -37.61210 -37.53420 -34.64883 -33.32672 -33.01005 -32.18855 -31.79278 -30.25555 -29.39158 -27.65367 -26.98978 -26.70383 -26.19827 -25.02915 -23.67334 -23.31127 -22.48604 -22.12157 -21.53376 -20.11919 -19.54331 -19.49144 -19.42873 -18.61507 -18.16854 -18.01435 -17.53658 -17.04056 -16.95917 -16.55801 -16.42906 -16.20571 -16.05771 -15.89825 -15.56901 -15.52309 -15.32547 -15.20023 -15.08908 -15.07832 -14.90462 -14.79943 -14.77709 -14.63239 -14.59166 -14.46683 -14.29473 -14.22454 -13.96189 -13.65539 -13.49743 -13.44185 -13.19102 -13.00958 -12.90716 -12.80275 -12.58019 -12.36119 -12.22722 -12.00073 -11.88164 -11.53351 -11.45233 -11.32941 -11.20819 -11.18659 -10.90688 -10.22328 -10.09995 -10.06200 -9.83593 -9.67237 -9.61874 -4.97548 -0.36203 0.02143 0.10558 0.26753 0.63371 1.30174 1.54705 1.59566 1.60884 1.89482 1.91326 2.18303 2.57694 2.62591 2.73395 2.95735 3.37130 3.45534 3.49822 3.60830 3.64168 3.67781 3.74087 3.84385 3.85133 3.95886 4.02556 4.03811 4.05749 4.09699 4.18643 4.23628 4.29097 4.29725 4.34729 4.42031 4.43771 4.50077 4.58249 4.63233 4.70999 4.75891 4.84927 4.88154 4.95098 4.96854 4.98434 5.01668 5.01758 5.12537 5.16126 5.22857 5.37201 5.38876 5.50995 5.55693 5.65432 5.85062 6.07252 6.56351 6.57624 7.27909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.507 5.507 3 C 0.038 3.962 4 C 0.516 3.484 5 O -0.562 6.562 6 N -0.699 5.699 7 C 0.121 3.879 8 H 0.080 0.920 9 C -0.127 4.127 10 C -0.062 4.062 11 H 0.124 0.876 12 C -0.069 4.069 13 C -0.099 4.099 14 C -0.103 4.103 15 Br -0.065 7.065 16 C -0.109 4.109 17 C -0.115 4.115 18 C -0.101 4.101 19 C -0.144 4.144 20 C 0.130 3.870 21 C -0.100 4.100 22 C -0.065 4.065 23 O -0.540 6.540 24 Si 0.785 3.215 25 C -0.062 4.062 26 C -0.184 4.184 27 C 0.509 3.491 28 F -0.182 7.182 29 F -0.177 7.177 30 F -0.177 7.177 31 C -0.053 4.053 32 C -0.138 4.138 33 H 0.050 0.950 34 H 0.062 0.938 35 H 0.079 0.921 36 H 0.103 0.897 37 H 0.130 0.870 38 H 0.418 0.582 39 H 0.093 0.907 40 H 0.091 0.909 41 H 0.133 0.867 42 H 0.136 0.864 43 H 0.152 0.848 44 H 0.154 0.846 45 H 0.086 0.914 46 H 0.072 0.928 47 H 0.073 0.927 48 H 0.371 0.629 49 H -0.294 1.294 50 H -0.265 1.265 51 H 0.151 0.849 52 H 0.157 0.843 53 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.046 6.598 -6.139 9.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.229 5.229 3 C -0.091 4.091 4 C 0.303 3.697 5 O -0.439 6.439 6 N -0.352 5.352 7 C 0.015 3.985 8 H 0.099 0.901 9 C -0.165 4.165 10 C -0.080 4.080 11 H 0.142 0.858 12 C -0.069 4.069 13 C -0.119 4.119 14 C -0.183 4.183 15 Br 0.021 6.979 16 C -0.129 4.129 17 C -0.133 4.133 18 C -0.119 4.119 19 C -0.182 4.182 20 C 0.036 3.964 21 C -0.101 4.101 22 C -0.174 4.174 23 O -0.346 6.346 24 Si 0.688 3.312 25 C -0.080 4.080 26 C -0.186 4.186 27 C 0.454 3.546 28 F -0.164 7.164 29 F -0.158 7.158 30 F -0.158 7.158 31 C -0.071 4.071 32 C -0.157 4.157 33 H 0.069 0.931 34 H 0.081 0.919 35 H 0.098 0.902 36 H 0.120 0.880 37 H 0.147 0.853 38 H 0.255 0.745 39 H 0.111 0.889 40 H 0.109 0.891 41 H 0.150 0.850 42 H 0.153 0.847 43 H 0.169 0.831 44 H 0.171 0.829 45 H 0.104 0.896 46 H 0.091 0.909 47 H 0.091 0.909 48 H 0.220 0.780 49 H -0.221 1.221 50 H -0.191 1.191 51 H 0.168 0.832 52 H 0.175 0.825 53 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 1.625 4.594 -4.156 6.404 hybrid contribution -1.299 1.535 -0.581 2.094 sum 0.325 6.129 -4.737 7.753 Atomic orbital electron populations 1.22562 0.84287 1.02761 1.02423 1.59152 1.09885 1.13433 1.40406 1.22212 1.03834 0.87851 0.95240 1.20760 0.78527 0.81524 0.88876 1.90727 1.40579 1.64975 1.47635 1.45489 1.57399 1.12996 1.19298 1.21717 0.96404 0.93423 0.86949 0.90139 1.23366 0.98709 0.93106 1.01363 1.21639 0.96956 0.88864 1.00508 0.85802 1.19888 0.97680 0.95963 0.93419 1.21082 0.99028 0.96081 0.95706 1.21943 1.05929 0.97075 0.93328 1.96763 1.81903 1.99063 1.20184 1.21353 0.98370 0.97372 0.95814 1.21498 0.98072 0.99429 0.94327 1.21552 0.98047 0.91422 1.00923 1.23531 0.96688 0.95167 1.02850 1.18845 0.94786 0.93432 0.89371 1.20168 0.98554 0.95634 0.95728 1.25273 0.95462 1.06670 0.89969 1.86693 1.42584 1.22904 1.82465 0.92659 0.86626 0.70464 0.81462 1.20813 0.97221 0.99425 0.90556 1.19977 1.06657 0.99685 0.92268 1.18346 0.75641 0.77788 0.82783 1.93236 1.65381 1.65704 1.92060 1.93201 1.94241 1.69478 1.58881 1.93210 1.48229 1.83170 1.91175 1.21108 0.92988 0.91620 1.01413 1.21867 1.00780 1.01713 0.91373 0.93123 0.91872 0.90218 0.87980 0.85252 0.74453 0.88891 0.89093 0.84957 0.84656 0.83073 0.82866 0.89586 0.90907 0.90912 0.78032 1.22145 1.19062 0.83228 0.82534 0.82192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 8.94 127.69 1.14 1.09 16 2 N -0.51 1.64 3.19 -724.44 -2.31 -0.67 16 3 C 0.04 -0.33 4.91 85.56 0.42 0.09 16 4 C 0.52 -1.71 7.55 87.66 0.66 -1.05 16 5 O -0.56 -3.79 13.91 -3.01 -0.04 -3.83 16 6 N -0.70 5.84 5.26 -440.04 -2.32 3.53 16 7 C 0.12 -0.61 4.32 45.52 0.20 -0.42 16 8 H 0.08 0.07 7.46 -2.39 -0.02 0.05 16 9 C -0.13 1.00 7.29 31.12 0.23 1.23 16 10 C -0.06 0.52 3.86 -11.01 -0.04 0.48 16 11 H 0.12 -1.58 8.09 -2.38 -0.02 -1.60 16 12 C -0.07 0.29 5.29 -19.87 -0.11 0.18 16 13 C -0.10 0.06 8.34 22.28 0.19 0.24 16 14 C -0.10 -0.18 6.22 22.31 0.14 -0.04 16 15 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 16 C -0.11 0.03 9.79 22.29 0.22 0.25 16 17 C -0.11 0.43 10.05 22.27 0.22 0.65 16 18 C -0.10 0.55 9.71 22.27 0.22 0.76 16 19 C -0.14 0.77 7.25 31.12 0.23 1.00 16 20 C 0.13 -0.44 4.61 38.21 0.18 -0.26 16 21 C -0.10 0.04 5.28 -19.73 -0.10 -0.07 16 22 C -0.06 -0.15 2.30 71.24 0.16 0.01 16 23 O -0.54 -1.88 12.65 -148.98 -1.89 -3.76 16 24 Si 0.79 1.70 30.17 68.60 2.07 3.77 16 25 C -0.06 0.05 8.01 22.25 0.18 0.23 16 26 C -0.18 0.27 5.46 -19.84 -0.11 0.17 16 27 C 0.51 0.36 3.36 71.24 0.24 0.60 16 28 F -0.18 -0.57 17.30 44.97 0.78 0.21 16 29 F -0.18 -0.17 16.46 44.97 0.74 0.57 16 30 F -0.18 -0.31 16.46 44.97 0.74 0.43 16 31 C -0.05 0.27 9.39 22.25 0.21 0.48 16 32 C -0.14 0.95 8.70 22.40 0.19 1.14 16 33 H 0.05 -0.31 7.46 -2.39 -0.02 -0.32 16 34 H 0.06 0.00 8.12 -2.39 -0.02 -0.02 16 35 H 0.08 0.21 5.88 -2.39 -0.01 0.19 16 36 H 0.10 -1.42 7.49 -2.39 -0.02 -1.44 16 37 H 0.13 -1.58 8.06 -2.39 -0.02 -1.60 16 38 H 0.42 -6.26 8.70 -92.71 -0.81 -7.06 16 39 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 40 H 0.09 -0.52 7.71 -2.39 -0.02 -0.54 16 41 H 0.13 -0.17 6.67 -2.91 -0.02 -0.19 16 42 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 43 H 0.15 -1.22 8.06 -2.91 -0.02 -1.25 16 44 H 0.15 -1.64 8.05 -2.91 -0.02 -1.66 16 45 H 0.09 -0.29 6.32 -2.38 -0.02 -0.30 16 46 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 47 H 0.07 0.35 7.78 -2.39 -0.02 0.33 16 48 H 0.37 0.01 8.38 -74.06 -0.62 -0.61 16 49 H -0.29 -2.74 7.11 99.48 0.71 -2.03 16 50 H -0.27 -1.23 7.11 99.48 0.71 -0.53 16 51 H 0.15 -0.42 4.67 -2.91 -0.01 -0.44 16 52 H 0.16 -1.34 7.60 -2.91 -0.02 -1.36 16 53 H 0.16 -1.92 7.16 -2.91 -0.02 -1.94 16 Total: 0.00 -19.14 461.97 1.37 -17.77 By element: Atomic # 1 Polarization: -23.52 SS G_CDS: -0.38 Total: -23.90 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: 4.66 Total: 6.78 kcal Atomic # 7 Polarization: 7.48 SS G_CDS: -4.63 Total: 2.86 kcal Atomic # 8 Polarization: -5.66 SS G_CDS: -1.93 Total: -7.59 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 2.26 Total: 1.21 kcal Atomic # 14 Polarization: 1.70 SS G_CDS: 2.07 Total: 3.77 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -19.14 1.37 -17.77 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.244 kcal (2) G-P(sol) polarization free energy of solvation -19.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.773 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds