Wall clock time and date at job start Tue Mar 9 2021 14:58:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34228 * 116.99454 * 2 1 4 4 O 1.20819 * 120.00406 * 0.02562 * 3 2 1 5 5 C 1.50704 * 119.99453 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.85048 * 334.66288 * 5 3 2 7 7 C 1.34778 * 119.99780 * 50.34035 * 6 5 3 8 8 O 1.21571 * 119.99927 * 359.97438 * 7 6 5 9 9 C 1.47692 * 120.00049 * 179.97438 * 7 6 5 10 10 C 1.39808 * 120.15446 * 180.20578 * 9 7 6 11 11 F 1.35092 * 120.08699 * 0.02562 * 10 9 7 12 12 C 1.38317 * 119.82806 * 180.26945 * 10 9 7 13 13 C 1.38189 * 120.14343 * 359.77459 * 12 10 9 14 14 C 1.50699 * 119.83638 * 179.97438 * 13 12 10 15 15 O 1.42896 * 109.47113 * 254.97378 * 14 13 12 16 16 Si 1.86300 * 109.47425 * 14.97652 * 14 13 12 17 17 C 1.38652 * 120.31886 * 359.97438 * 13 12 10 18 18 F 1.35101 * 119.91806 * 180.02562 * 17 13 12 19 19 C 1.38072 * 120.16551 * 0.02562 * 17 13 12 20 20 C 1.53781 * 113.61347 * 203.47115 * 5 3 2 21 21 C 1.53778 * 87.08403 * 270.80012 * 20 5 3 22 22 H 1.08999 * 113.61798 * 89.11134 * 21 20 5 23 23 O 1.42899 * 113.61558 * 219.93502 * 21 20 5 24 24 C 1.42902 * 113.99957 * 209.99527 * 23 21 20 25 25 C 1.53778 * 113.61690 * 105.86603 * 5 3 2 26 26 H 1.09004 * 109.46935 * 299.99299 * 1 2 3 27 27 H 1.08996 * 109.47657 * 59.99847 * 1 2 3 28 28 H 1.09008 * 109.46641 * 180.02562 * 1 2 3 29 29 H 0.96996 * 120.00152 * 230.33015 * 6 5 3 30 30 H 1.07993 * 119.92663 * 179.74603 * 12 10 9 31 31 H 1.09000 * 109.46716 * 134.97890 * 14 13 12 32 32 H 0.96705 * 114.00074 * 60.00607 * 15 14 13 33 33 H 1.48505 * 109.99808 * 58.68178 * 16 14 13 34 34 H 1.48503 * 109.99996 * 179.97438 * 16 14 13 35 35 H 1.08002 * 120.07124 * 179.97438 * 19 17 13 36 36 H 1.09007 * 113.61279 * 25.34535 * 20 5 3 37 37 H 1.09000 * 113.61797 * 156.25105 * 20 5 3 38 38 H 1.08994 * 109.46844 * 180.02562 * 24 23 21 39 39 H 1.09001 * 109.47329 * 299.99983 * 24 23 21 40 40 H 1.08999 * 109.47121 * 59.99652 * 24 23 21 41 41 H 1.08999 * 113.61661 * 203.74914 * 25 5 3 42 42 H 1.09002 * 113.61331 * 334.64881 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1985 0.0861 0.5767 7 6 3.8373 -1.1417 0.1539 8 8 2.9865 -1.2625 -0.7060 9 6 4.4750 -2.3402 0.7354 10 6 4.1058 -3.6152 0.2963 11 9 3.1643 -3.7550 -0.6624 12 6 4.7034 -4.7332 0.8495 13 6 5.6663 -4.5916 1.8305 14 6 6.3125 -5.8145 2.4288 15 8 5.7864 -6.0387 3.7383 16 14 5.9558 -7.2941 1.3544 17 6 6.0408 -3.3299 2.2668 18 9 6.9834 -3.2009 3.2259 19 6 5.4527 -2.2050 1.7235 20 6 4.1140 2.5977 0.5607 21 6 4.0335 3.1483 -0.8729 22 1 3.0727 3.6040 -1.1124 23 8 5.1438 3.9730 -1.2325 24 6 4.8277 4.9903 -2.1851 25 6 4.1608 1.6921 -1.3560 26 1 -0.3633 0.5137 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0278 0.0005 29 1 4.8771 0.1825 1.2630 30 1 4.4165 -5.7189 0.5143 31 1 7.3900 -5.6621 2.4914 32 1 4.8303 -6.1824 3.7588 33 1 6.4701 -7.0602 -0.0190 34 1 6.5883 -8.5065 1.9335 35 1 5.7452 -1.2230 2.0648 36 1 3.4353 3.0911 1.2566 37 1 5.1320 2.5218 0.9427 38 1 5.7226 5.5720 -2.4057 39 1 4.4600 4.5285 -3.1014 40 1 4.0595 5.6459 -1.7751 41 1 5.1916 1.3680 -1.4991 42 1 3.5199 1.4553 -2.2054 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:03 Heat of formation + Delta-G solvation = -199.510997 kcal Electronic energy + Delta-G solvation = -33235.362259 eV Core-core repulsion = 28206.875333 eV Total energy + Delta-G solvation = -5028.486926 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.115 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -50.11432 -50.00553 -42.55741 -41.00502 -40.10635 -39.62797 -37.75869 -37.68382 -36.92508 -34.64629 -33.09072 -31.43047 -29.26181 -28.12367 -27.72161 -27.20674 -25.93392 -24.47445 -24.02749 -23.04106 -21.78146 -20.73219 -19.80223 -19.30641 -18.80161 -18.35397 -18.00461 -17.81704 -17.62765 -17.34310 -17.18189 -16.97315 -16.81511 -16.48454 -16.18953 -16.11746 -15.96616 -15.66363 -15.55848 -15.36730 -15.12042 -14.92934 -14.52729 -14.39003 -14.22670 -13.80074 -13.71262 -13.65133 -13.32133 -13.22217 -13.01745 -12.96910 -12.60324 -12.41563 -12.30021 -12.18819 -12.13485 -11.66321 -11.54077 -10.97410 -10.71473 -10.64239 -10.62589 -10.35928 -9.84953 -5.21220 -0.85036 -0.38363 0.98848 1.02399 1.40690 1.49859 1.63094 1.66793 1.82412 2.24997 2.69299 2.74142 2.78381 2.91969 3.02316 3.14769 3.18174 3.38567 3.43592 3.49032 3.63973 3.67994 3.98768 4.02346 4.22426 4.25968 4.26824 4.31624 4.35242 4.41314 4.42655 4.43146 4.47023 4.58472 4.60498 4.66267 4.67560 4.70391 4.74592 4.76101 5.05736 5.31963 5.42475 6.09684 6.14159 6.34212 6.71451 6.98260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.312 6.312 3 C 0.477 3.523 4 O -0.502 6.502 5 C 0.156 3.844 6 N -0.711 5.711 7 C 0.555 3.445 8 O -0.469 6.469 9 C -0.136 4.136 10 C 0.161 3.839 11 F -0.103 7.103 12 C -0.131 4.131 13 C -0.101 4.101 14 C -0.072 4.072 15 O -0.529 6.529 16 Si 0.689 3.311 17 C 0.111 3.889 18 F -0.121 7.121 19 C -0.095 4.095 20 C -0.118 4.118 21 C 0.067 3.933 22 H 0.105 0.895 23 O -0.372 6.372 24 C 0.028 3.972 25 C -0.144 4.144 26 H 0.060 0.940 27 H 0.062 0.938 28 H 0.102 0.898 29 H 0.408 0.592 30 H 0.158 0.842 31 H 0.122 0.878 32 H 0.381 0.619 33 H -0.250 1.250 34 H -0.246 1.246 35 H 0.151 0.849 36 H 0.096 0.904 37 H 0.115 0.885 38 H 0.089 0.911 39 H 0.044 0.956 40 H 0.046 0.954 41 H 0.113 0.887 42 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.139 -0.665 0.797 1.047 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.226 6.226 3 C 0.318 3.682 4 O -0.390 6.390 5 C 0.068 3.932 6 N -0.367 5.367 7 C 0.341 3.659 8 O -0.341 6.341 9 C -0.140 4.140 10 C 0.140 3.860 11 F -0.081 7.081 12 C -0.149 4.149 13 C -0.103 4.103 14 C -0.182 4.182 15 O -0.335 6.335 16 Si 0.589 3.411 17 C 0.091 3.909 18 F -0.099 7.099 19 C -0.115 4.115 20 C -0.156 4.156 21 C 0.009 3.991 22 H 0.123 0.877 23 O -0.290 6.290 24 C -0.069 4.069 25 C -0.183 4.183 26 H 0.079 0.921 27 H 0.081 0.919 28 H 0.120 0.880 29 H 0.245 0.755 30 H 0.175 0.825 31 H 0.139 0.861 32 H 0.229 0.771 33 H -0.175 1.175 34 H -0.170 1.170 35 H 0.169 0.831 36 H 0.115 0.885 37 H 0.133 0.867 38 H 0.108 0.892 39 H 0.063 0.937 40 H 0.065 0.935 41 H 0.132 0.868 42 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 0.128 -1.075 -0.103 1.087 hybrid contribution 0.284 0.699 0.418 0.863 sum 0.412 -0.376 0.315 0.640 Atomic orbital electron populations 1.23344 0.77022 1.03921 1.02218 1.86990 1.22653 1.30697 1.82215 1.22998 0.90207 0.82436 0.72545 1.90694 1.66035 1.36595 1.45663 1.21034 0.86763 0.86470 0.98979 1.45681 1.43370 1.04142 1.43488 1.17823 0.82516 0.82494 0.83081 1.90935 1.28710 1.85452 1.28986 1.19808 1.00622 0.93085 1.00534 1.17459 0.88430 0.92057 0.88066 1.91658 1.60706 1.96245 1.59470 1.20864 0.97591 0.98682 0.97748 1.20512 0.97407 0.95428 0.96938 1.25148 1.00941 1.00748 0.91404 1.86596 1.27863 1.93841 1.25179 0.94846 0.91413 0.77052 0.77800 1.17222 0.90705 0.92892 0.90064 1.91587 1.61431 1.96528 1.60363 1.21195 0.95441 0.99136 0.95689 1.23517 1.03278 0.90623 0.98135 1.23574 0.91299 0.89915 0.94352 0.87690 1.87916 1.33459 1.45928 1.61685 1.22868 1.02044 0.90363 0.91582 1.23975 1.03202 0.95928 0.95154 0.92145 0.91875 0.87964 0.75498 0.82454 0.86051 0.77118 1.17462 1.17046 0.83101 0.88508 0.86698 0.89225 0.93730 0.93542 0.86841 0.89698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.31 -1.09 6.30 -47.60 -0.30 -1.39 16 3 C 0.48 1.42 6.98 36.01 0.25 1.68 16 4 O -0.50 -2.30 14.99 -18.74 -0.28 -2.58 16 5 C 0.16 0.04 1.22 -132.16 -0.16 -0.12 16 6 N -0.71 0.83 5.27 -48.90 -0.26 0.57 16 7 C 0.56 0.64 7.12 -12.40 -0.09 0.55 16 8 O -0.47 -2.05 11.86 -19.93 -0.24 -2.29 16 9 C -0.14 0.05 5.88 -104.92 -0.62 -0.57 16 10 C 0.16 0.01 7.28 -38.97 -0.28 -0.27 16 11 F -0.10 -0.23 15.55 2.25 0.04 -0.20 16 12 C -0.13 0.27 8.62 -39.57 -0.34 -0.08 16 13 C -0.10 0.15 5.27 -104.49 -0.55 -0.40 16 14 C -0.07 0.12 2.44 36.01 0.09 0.20 16 15 O -0.53 0.54 12.88 -35.23 -0.45 0.09 16 16 Si 0.69 -1.77 29.90 -169.99 -5.08 -6.85 16 17 C 0.11 -0.09 7.23 -39.49 -0.29 -0.37 16 18 F -0.12 -0.10 16.73 2.25 0.04 -0.06 16 19 C -0.10 0.20 9.51 -39.11 -0.37 -0.18 16 20 C -0.12 0.14 6.96 -25.92 -0.18 -0.04 16 21 C 0.07 0.01 3.90 -25.83 -0.10 -0.09 16 22 H 0.11 0.08 7.05 -51.93 -0.37 -0.28 16 23 O -0.37 -0.39 10.72 -35.23 -0.38 -0.77 16 24 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 25 C -0.14 -0.03 7.30 -25.83 -0.19 -0.22 16 26 H 0.06 0.04 8.13 -51.93 -0.42 -0.38 16 27 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 28 H 0.10 -0.05 8.14 -51.92 -0.42 -0.47 16 29 H 0.41 -1.72 6.67 -40.82 -0.27 -1.99 16 30 H 0.16 -0.70 5.10 -52.49 -0.27 -0.97 16 31 H 0.12 -0.11 7.89 -51.93 -0.41 -0.52 16 32 H 0.38 -2.01 8.70 45.56 0.40 -1.61 16 33 H -0.25 0.04 7.11 56.52 0.40 0.45 16 34 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 35 H 0.15 -0.73 6.41 -52.49 -0.34 -1.07 16 36 H 0.10 -0.09 7.85 -51.92 -0.41 -0.50 16 37 H 0.11 -0.35 8.13 -51.93 -0.42 -0.77 16 38 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.08 0.09 8.09 -51.93 -0.42 -0.33 16 LS Contribution 362.39 15.07 5.46 5.46 Total: 0.00 -9.55 362.39 -6.78 -16.34 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -4.66 Total: -10.60 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -0.67 Total: 2.27 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.26 Total: 0.57 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -1.65 Total: -6.93 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.07 Total: -0.26 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.08 Total: -6.85 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -9.55 -6.78 -16.34 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -183.174 kcal (2) G-P(sol) polarization free energy of solvation -9.554 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -192.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds