Wall clock time and date at job start Tue Mar 9 2021 14:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 N 1.46504 * 112.85135 * 336.19769 * 5 3 2 7 7 C 1.34783 * 120.00018 * 50.32996 * 6 5 3 8 8 O 1.21611 * 119.99496 * 0.02562 * 7 6 5 9 9 C 1.47369 * 119.99965 * 180.02562 * 7 6 5 10 10 C 1.36418 * 127.19394 * 179.71329 * 9 7 6 11 11 C 1.50702 * 125.79599 * 0.02562 * 10 9 7 12 12 O 1.33646 * 108.40259 * 179.89627 * 10 9 7 13 13 C 1.34219 * 110.90372 * 0.38245 * 12 10 9 14 14 C 1.50700 * 125.43218 * 179.76689 * 13 12 10 15 15 O 1.42902 * 109.46764 * 244.99906 * 14 13 12 16 16 Si 1.86291 * 109.47593 * 4.99966 * 14 13 12 17 17 C 1.34176 * 109.12669 * 359.76367 * 13 12 10 18 18 C 1.53783 * 113.61592 * 205.00183 * 5 3 2 19 19 C 1.53775 * 87.07953 * 270.88234 * 18 5 3 20 20 H 1.09003 * 113.61211 * 89.11917 * 19 18 5 21 21 O 1.42901 * 113.61440 * 219.93235 * 19 18 5 22 22 C 1.42896 * 114.00151 * 210.00296 * 21 19 18 23 23 C 1.53774 * 87.08256 * 334.56578 * 19 18 5 24 24 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 25 25 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 26 26 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 27 27 H 0.97005 * 120.00078 * 230.33850 * 6 5 3 28 28 H 1.09003 * 109.46936 * 90.00504 * 11 10 9 29 29 H 1.09005 * 109.47202 * 209.99933 * 11 10 9 30 30 H 1.08994 * 109.47757 * 330.00527 * 11 10 9 31 31 H 1.09004 * 109.47199 * 125.00221 * 14 13 12 32 32 H 0.96702 * 114.00197 * 180.02562 * 15 14 13 33 33 H 1.48503 * 110.00209 * 299.99954 * 16 14 13 34 34 H 1.48500 * 110.00219 * 61.32336 * 16 14 13 35 35 H 1.07996 * 127.02035 * 179.97438 * 17 13 12 36 36 H 1.09006 * 113.61249 * 25.43401 * 18 5 3 37 37 H 1.09003 * 113.61589 * 156.24912 * 18 5 3 38 38 H 1.09002 * 109.47535 * 179.97438 * 22 21 19 39 39 H 1.09001 * 109.47392 * 300.00183 * 22 21 19 40 40 H 1.09004 * 109.47700 * 60.00128 * 22 21 19 41 41 H 1.09002 * 113.61438 * 270.88275 * 23 19 18 42 42 H 1.09003 * 113.61454 * 139.98252 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1993 0.0710 0.5438 7 6 3.8374 -1.1450 0.0890 8 8 2.9856 -1.2428 -0.7735 9 6 4.4737 -2.3560 0.6370 10 6 4.2181 -3.6506 0.2909 11 6 3.2169 -4.1063 -0.7391 12 8 5.0084 -4.4458 1.0183 13 6 5.7800 -3.7254 1.8473 14 6 6.7864 -4.2905 2.8162 15 8 6.3714 -4.0063 4.1538 16 14 6.9065 -6.1348 2.5819 17 6 5.5123 -2.4219 1.6755 18 6 4.1149 2.5823 0.5950 19 6 4.0303 3.1715 -0.8229 20 1 3.0686 3.6330 -1.0472 21 8 5.1392 4.0063 -1.1629 22 6 4.8201 5.0489 -2.0865 23 6 4.1588 1.7306 -1.3444 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 4.8789 0.1491 1.2316 28 1 3.7001 -4.1649 -1.7145 29 1 2.8340 -5.0890 -0.4638 30 1 2.3925 -3.3948 -0.7844 31 1 7.7607 -3.8370 2.6340 32 1 6.9738 -4.3412 4.8321 33 1 5.5845 -6.7651 2.8276 34 1 7.3679 -6.4428 1.2044 35 1 5.9667 -1.5909 2.1945 36 1 3.4379 3.0561 1.3059 37 1 5.1335 2.4961 0.9734 38 1 5.7140 5.6376 -2.2930 39 1 4.4501 4.6120 -3.0141 40 1 4.0528 5.6929 -1.6568 41 1 5.1899 1.4120 -1.4976 42 1 3.5173 1.5169 -2.1994 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:59:15 Heat of formation + Delta-G solvation = -129.100760 kcal Electronic energy + Delta-G solvation = -29057.527849 eV Core-core repulsion = 24780.546040 eV Total energy + Delta-G solvation = -4276.981809 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.134 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.74349 -42.39071 -40.19792 -39.69772 -38.01470 -37.64464 -36.86120 -34.51684 -33.78129 -33.12211 -29.62815 -29.03990 -27.87965 -27.16340 -26.36517 -25.42644 -24.14479 -23.06545 -22.05511 -20.74165 -20.45788 -18.97272 -18.81318 -18.43906 -17.78600 -17.52866 -17.25088 -17.22848 -16.96747 -16.74037 -16.11188 -15.91050 -15.84994 -15.41596 -15.08079 -14.96550 -14.60747 -14.34307 -14.20871 -14.09872 -14.04878 -13.86825 -13.63841 -13.58032 -13.21581 -13.11681 -12.92027 -12.59650 -12.51372 -12.22088 -12.11057 -12.08706 -11.61067 -11.47011 -10.85000 -10.80926 -10.58342 -10.52931 -10.19587 -9.54823 -5.14522 0.31318 0.82866 1.08238 1.10024 1.49214 1.62499 1.70862 1.96112 1.98252 2.39879 2.81506 3.01033 3.18674 3.27100 3.50632 3.52191 3.69571 3.73709 3.80316 4.05620 4.09615 4.17728 4.28747 4.36340 4.37785 4.41049 4.44878 4.50116 4.51754 4.53956 4.64188 4.66688 4.71798 4.73562 4.78550 4.79895 4.85256 5.09388 5.21829 5.27509 5.48138 5.93227 6.15157 6.39538 6.42336 6.78658 7.25519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.311 6.311 3 C 0.479 3.521 4 O -0.505 6.505 5 C 0.157 3.843 6 N -0.710 5.710 7 C 0.592 3.408 8 O -0.497 6.497 9 C -0.247 4.247 10 C 0.094 3.906 11 C -0.086 4.086 12 O -0.176 6.176 13 C -0.014 4.014 14 C -0.035 4.035 15 O -0.543 6.543 16 Si 0.708 3.292 17 C -0.143 4.143 18 C -0.118 4.118 19 C 0.067 3.933 20 H 0.105 0.895 21 O -0.372 6.372 22 C 0.028 3.972 23 C -0.142 4.142 24 H 0.062 0.938 25 H 0.059 0.941 26 H 0.100 0.900 27 H 0.408 0.592 28 H 0.092 0.908 29 H 0.079 0.921 30 H 0.114 0.886 31 H 0.096 0.904 32 H 0.391 0.609 33 H -0.249 1.249 34 H -0.253 1.253 35 H 0.160 0.840 36 H 0.094 0.906 37 H 0.114 0.886 38 H 0.089 0.911 39 H 0.044 0.956 40 H 0.045 0.955 41 H 0.112 0.888 42 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.673 -1.629 2.477 5.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.225 6.225 3 C 0.320 3.680 4 O -0.393 6.393 5 C 0.068 3.932 6 N -0.365 5.365 7 C 0.380 3.620 8 O -0.373 6.373 9 C -0.251 4.251 10 C 0.042 3.958 11 C -0.142 4.142 12 O -0.074 6.074 13 C -0.062 4.062 14 C -0.145 4.145 15 O -0.351 6.351 16 Si 0.607 3.393 17 C -0.163 4.163 18 C -0.156 4.156 19 C 0.008 3.992 20 H 0.123 0.877 21 O -0.290 6.290 22 C -0.068 4.068 23 C -0.181 4.181 24 H 0.081 0.919 25 H 0.078 0.922 26 H 0.119 0.881 27 H 0.245 0.755 28 H 0.110 0.890 29 H 0.098 0.902 30 H 0.132 0.868 31 H 0.113 0.887 32 H 0.240 0.760 33 H -0.173 1.173 34 H -0.177 1.177 35 H 0.178 0.822 36 H 0.113 0.887 37 H 0.132 0.868 38 H 0.107 0.893 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.131 0.869 42 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 3.220 -2.183 1.151 4.057 hybrid contribution -0.209 0.871 0.151 0.909 sum 3.011 -1.311 1.302 3.533 Atomic orbital electron populations 1.23324 0.77251 1.03767 1.02190 1.86984 1.22431 1.30838 1.82219 1.23025 0.90292 0.82323 0.72348 1.90684 1.66126 1.36606 1.45877 1.20974 0.86648 0.86412 0.99194 1.45588 1.43277 1.04085 1.43530 1.17107 0.81251 0.81872 0.81741 1.90811 1.30285 1.85925 1.30264 1.21029 1.05365 0.93466 1.05276 1.22916 0.91667 0.87825 0.93439 1.20710 0.95776 1.03543 0.94164 1.83695 1.42399 1.38316 1.42947 1.21040 0.98269 0.90047 0.96803 1.23789 0.94391 1.13341 0.82933 1.86465 1.52879 1.82321 1.13438 0.95270 0.84968 0.74291 0.84765 1.22555 0.98696 0.96519 0.98482 1.23506 1.03247 0.90779 0.98024 1.23558 0.91251 0.89831 0.94511 0.87699 1.87915 1.33506 1.43933 1.63679 1.22860 1.01979 0.89869 0.92132 1.23922 1.03149 0.95680 0.95374 0.91922 0.92194 0.88115 0.75530 0.88987 0.90223 0.86756 0.88679 0.76013 1.17331 1.17698 0.82235 0.88696 0.86761 0.89262 0.93766 0.93587 0.86935 0.89860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.31 -1.37 6.34 -47.59 -0.30 -1.67 16 3 C 0.48 1.95 6.96 36.00 0.25 2.20 16 4 O -0.50 -2.79 14.97 -18.75 -0.28 -3.07 16 5 C 0.16 0.24 1.22 -132.16 -0.16 0.08 16 6 N -0.71 -0.58 5.32 -49.00 -0.26 -0.84 16 7 C 0.59 1.84 7.14 -12.54 -0.09 1.75 16 8 O -0.50 -2.52 11.42 -19.91 -0.23 -2.75 16 9 C -0.25 -0.71 6.31 -103.28 -0.65 -1.36 16 10 C 0.09 0.29 7.37 -34.96 -0.26 0.04 16 11 C -0.09 -0.08 9.89 36.01 0.36 0.28 16 12 O -0.18 -0.66 8.90 7.66 0.07 -0.59 16 13 C -0.01 -0.03 6.22 -35.74 -0.22 -0.25 16 14 C -0.03 0.03 2.96 36.01 0.11 0.14 16 15 O -0.54 0.59 12.86 -35.23 -0.45 0.14 16 16 Si 0.71 -0.96 32.09 -169.99 -5.46 -6.42 16 17 C -0.14 -0.22 10.48 -37.45 -0.39 -0.61 16 18 C -0.12 0.00 6.96 -25.92 -0.18 -0.18 16 19 C 0.07 0.08 3.89 -25.93 -0.10 -0.03 16 20 H 0.11 0.17 7.01 -51.93 -0.36 -0.19 16 21 O -0.37 -0.66 10.72 -35.23 -0.38 -1.04 16 22 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 23 C -0.14 -0.17 7.28 -25.92 -0.19 -0.36 16 24 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 25 H 0.06 0.09 8.13 -51.93 -0.42 -0.33 16 26 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.41 -0.69 7.81 -40.82 -0.32 -1.01 16 28 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.11 0.19 6.49 -51.93 -0.34 -0.15 16 31 H 0.10 -0.34 7.96 -51.93 -0.41 -0.75 16 32 H 0.39 -2.54 8.74 45.56 0.40 -2.14 16 33 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 34 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 35 H 0.16 -0.19 7.74 -52.49 -0.41 -0.59 16 36 H 0.09 0.02 7.88 -51.93 -0.41 -0.39 16 37 H 0.11 -0.20 8.13 -51.93 -0.42 -0.62 16 38 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.11 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.08 0.16 8.09 -51.93 -0.42 -0.26 16 LS Contribution 358.04 15.07 5.40 5.40 Total: 0.00 -10.09 358.04 -6.96 -17.05 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -5.69 Total: -10.11 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 0.63 Total: 3.90 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -0.26 Total: -0.84 kcal Atomic # 8 Polarization: -7.41 SS G_CDS: -1.57 Total: -8.98 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.46 Total: -6.42 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.09 -6.96 -17.05 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.052 kcal (2) G-P(sol) polarization free energy of solvation -10.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds