Wall clock time and date at job start Tue Mar 9 2021 12:50:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35537 * 125.67744 * 2 1 4 4 C 1.35460 * 108.86797 * 180.30283 * 3 2 1 5 5 C 1.50696 * 126.06334 * 179.69400 * 4 3 2 6 6 O 1.42896 * 109.47438 * 245.03793 * 5 4 3 7 7 Si 1.86299 * 109.47426 * 5.03776 * 5 4 3 8 8 C 1.39832 * 107.86796 * 359.72309 * 4 3 2 9 9 C 1.37649 * 125.67789 * 179.83809 * 2 1 3 10 10 C 1.46679 * 126.23501 * 359.96405 * 9 2 1 11 11 O 1.21688 * 120.00022 * 4.49078 * 10 9 2 12 12 N 1.34779 * 119.99892 * 184.48716 * 10 9 2 13 13 C 1.46506 * 119.99537 * 174.47728 * 12 10 9 14 14 H 1.08999 * 112.85339 * 336.20153 * 13 12 10 15 15 C 1.53956 * 113.53397 * 107.50829 * 13 12 10 16 16 C 1.53781 * 87.01716 * 89.18678 * 15 13 12 17 17 H 1.09005 * 113.61763 * 270.76549 * 16 15 13 18 18 C 1.50704 * 113.61500 * 139.95295 * 16 15 13 19 19 C 1.37922 * 119.92822 * 140.86282 * 18 16 15 20 20 C 1.39649 * 119.84822 * 179.97438 * 19 18 16 21 21 C 1.43200 * 120.15104 * 180.02562 * 20 19 18 22 22 N 9.93062 * 167.36524 * 298.85938 * 10 1 2 23 23 C 1.39610 * 119.70057 * 0.27993 * 20 19 18 24 24 C 1.37974 * 119.84191 * 359.42117 * 23 20 19 25 25 C 1.38338 * 120.15256 * 0.60062 * 24 23 20 26 26 C 1.53777 * 113.61165 * 205.00256 * 13 12 10 27 27 H 1.08998 * 109.47606 * 272.14085 * 1 2 3 28 28 H 1.09005 * 109.47193 * 32.14641 * 1 2 3 29 29 H 1.09001 * 109.46674 * 152.13932 * 1 2 3 30 30 H 1.07990 * 125.56618 * 359.97438 * 3 2 1 31 31 H 1.09006 * 109.47520 * 125.03649 * 5 4 3 32 32 H 0.96697 * 114.00738 * 180.02562 * 6 5 4 33 33 H 1.48504 * 110.00420 * 178.68112 * 7 5 4 34 34 H 1.48499 * 109.99998 * 300.00036 * 7 5 4 35 35 H 1.07997 * 126.45980 * 180.02562 * 8 4 3 36 36 H 0.96992 * 120.00456 * 354.48404 * 12 10 9 37 37 H 1.08997 * 113.66489 * 334.66356 * 15 13 12 38 38 H 1.08993 * 113.61355 * 203.70467 * 15 13 12 39 39 H 1.08000 * 120.07719 * 0.02562 * 19 18 16 40 40 H 1.08002 * 120.07969 * 179.72288 * 23 20 19 41 41 H 1.08003 * 119.92236 * 180.32251 * 24 23 20 42 42 H 1.08000 * 119.84856 * 179.69580 * 25 24 23 43 43 H 1.09001 * 113.61234 * 156.33974 * 26 13 12 44 44 H 1.08997 * 113.61607 * 25.43819 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7093 -0.0068 5 6 4.7536 1.6189 -0.0156 6 8 5.4695 1.4506 -1.2409 7 14 4.1936 3.3890 0.1383 8 6 3.5780 -0.6888 -0.0048 9 6 2.2678 -1.1181 0.0032 10 6 1.8124 -2.5124 0.0078 11 8 0.6247 -2.7649 -0.0733 12 7 2.7094 -3.5140 0.1019 13 6 2.2498 -4.8993 0.2285 14 1 1.2435 -4.9755 0.6405 15 6 2.4629 -5.7366 -1.0458 16 6 3.8502 -6.0906 -0.4845 17 1 4.6307 -5.3865 -0.7730 18 6 4.2449 -7.5271 -0.7120 19 6 5.5468 -7.8387 -1.0438 20 6 5.9109 -9.1705 -1.2537 21 6 7.2609 -9.5014 -1.5979 22 7 8.3317 -9.7638 -1.8719 23 6 4.9515 -10.1773 -1.1317 24 6 3.6541 -9.8520 -0.7933 25 6 3.3002 -8.5306 -0.5871 26 6 3.2679 -5.8258 0.9140 27 1 -0.3634 0.0384 1.0269 28 1 -0.3634 0.8701 -0.5468 29 1 -0.3633 -0.9086 -0.4803 30 1 1.9082 2.1235 -0.0004 31 1 5.4044 1.3695 0.8225 32 1 6.2573 2.0063 -1.3157 33 1 5.3708 4.2939 0.1628 34 1 3.3057 3.7415 -0.9986 35 1 4.4583 -1.3144 -0.0084 36 1 3.6591 -3.3176 0.0859 37 1 2.5000 -5.1422 -1.9587 38 1 1.7920 -6.5921 -1.1233 39 1 6.2833 -7.0547 -1.1402 40 1 5.2253 -11.2089 -1.2971 41 1 2.9120 -10.6304 -0.6934 42 1 2.2821 -8.2811 -0.3271 43 1 2.8174 -6.7058 1.3731 44 1 3.9538 -5.3034 1.5808 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_10803934.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:50 Heat of formation + Delta-G solvation = 73.691350 kcal Electronic energy + Delta-G solvation = -27420.247003 eV Core-core repulsion = 23499.267545 eV Total energy + Delta-G solvation = -3920.979458 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.142 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.54666 -41.41958 -40.19026 -38.88800 -37.76653 -37.44640 -34.90771 -33.82241 -32.22873 -32.12537 -30.66563 -28.36012 -26.63212 -26.36005 -25.59876 -24.91976 -23.80634 -22.75016 -21.21502 -20.83327 -20.23968 -18.96904 -18.65310 -18.37327 -17.36335 -17.17311 -16.84660 -16.65385 -16.51435 -15.88846 -15.75986 -15.50483 -15.21807 -15.15215 -14.92851 -14.86209 -14.49029 -14.40658 -14.16138 -14.01784 -13.97758 -13.78745 -13.55379 -13.39165 -13.21315 -13.12294 -12.93942 -12.77501 -12.49436 -12.47840 -11.92339 -11.74359 -11.66141 -11.20273 -11.11412 -10.34065 -10.15097 -9.90160 -9.67287 -9.65139 -9.24820 -4.86219 -0.18360 0.37895 0.41400 1.37325 1.54626 1.56249 1.58376 1.68601 1.91155 2.03116 2.28527 2.32312 2.83120 2.86533 3.51027 3.56850 3.69887 3.72903 3.78939 3.95026 3.95951 4.01200 4.03095 4.16583 4.20231 4.21323 4.33759 4.39088 4.43047 4.52839 4.64451 4.68616 4.74329 4.79246 4.79841 4.85531 4.92128 5.02590 5.07159 5.10656 5.19270 5.23701 5.36050 5.43373 5.52129 5.65752 5.72058 5.90918 5.91176 6.16193 6.39663 6.47452 6.71861 7.13079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.413 5.413 3 C 0.031 3.969 4 C -0.182 4.182 5 C -0.047 4.047 6 O -0.561 6.561 7 Si 0.761 3.239 8 C -0.112 4.112 9 C -0.078 4.078 10 C 0.591 3.409 11 O -0.580 6.580 12 N -0.690 5.690 13 C 0.116 3.884 14 H 0.092 0.908 15 C -0.142 4.142 16 C -0.068 4.068 17 H 0.107 0.893 18 C -0.074 4.074 19 C -0.069 4.069 20 C -0.046 4.046 21 C 0.276 3.724 22 N -0.474 5.474 23 C -0.076 4.076 24 C -0.116 4.116 25 C -0.082 4.082 26 C -0.123 4.123 27 H 0.089 0.911 28 H 0.107 0.893 29 H 0.088 0.912 30 H 0.195 0.805 31 H 0.090 0.910 32 H 0.391 0.609 33 H -0.291 1.291 34 H -0.297 1.297 35 H 0.160 0.840 36 H 0.414 0.586 37 H 0.062 0.938 38 H 0.107 0.893 39 H 0.138 0.862 40 H 0.140 0.860 41 H 0.156 0.844 42 H 0.151 0.849 43 H 0.112 0.888 44 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.110 2.381 5.246 7.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.084 5.084 3 C -0.106 4.106 4 C -0.188 4.188 5 C -0.156 4.156 6 O -0.370 6.370 7 Si 0.667 3.333 8 C -0.139 4.139 9 C -0.191 4.191 10 C 0.381 3.619 11 O -0.462 6.462 12 N -0.341 5.341 13 C 0.011 3.989 14 H 0.110 0.890 15 C -0.180 4.180 16 C -0.087 4.087 17 H 0.125 0.875 18 C -0.074 4.074 19 C -0.090 4.090 20 C -0.050 4.050 21 C -0.038 4.038 22 N -0.150 5.150 23 C -0.097 4.097 24 C -0.134 4.134 25 C -0.101 4.101 26 C -0.160 4.160 27 H 0.108 0.892 28 H 0.125 0.875 29 H 0.107 0.893 30 H 0.211 0.789 31 H 0.108 0.892 32 H 0.241 0.759 33 H -0.218 1.218 34 H -0.224 1.224 35 H 0.177 0.823 36 H 0.252 0.748 37 H 0.081 0.919 38 H 0.125 0.875 39 H 0.156 0.844 40 H 0.158 0.842 41 H 0.174 0.826 42 H 0.169 0.831 43 H 0.130 0.870 44 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -4.172 2.095 4.324 6.364 hybrid contribution 1.317 0.060 -0.968 1.635 sum -2.855 2.155 3.357 4.905 Atomic orbital electron populations 1.22469 0.74735 1.05888 1.04980 1.44000 1.07690 1.04732 1.52025 1.22215 0.89937 0.92482 1.05979 1.18888 0.92904 0.94183 1.12804 1.24231 0.93708 1.09101 0.88605 1.86561 1.44070 1.67280 1.39132 0.94405 0.80503 0.71900 0.86481 1.21431 0.94488 0.95016 1.02930 1.20098 0.90833 0.87721 1.20421 1.17097 0.85351 0.84075 0.75418 1.90767 1.17656 1.85255 1.52493 1.45242 1.09950 1.05337 1.73587 1.21972 0.99505 0.79519 0.97941 0.88989 1.23617 0.96669 1.00277 0.97457 1.21611 0.97417 0.92314 0.97323 0.87456 1.19679 0.92509 0.95796 0.99406 1.21203 0.96988 0.94118 0.96645 1.16101 0.85080 0.95491 1.08306 1.26178 0.93018 0.92365 0.92243 1.81316 1.13365 1.09187 1.11132 1.21417 0.92782 0.98965 0.96489 1.21392 0.95769 0.97469 0.98772 1.21596 1.00485 0.92145 0.95832 1.23416 0.97349 0.99536 0.95740 0.89248 0.87495 0.89332 0.78868 0.89193 0.75881 1.21842 1.22420 0.82268 0.74825 0.91899 0.87482 0.84411 0.84217 0.82626 0.83129 0.86986 0.89487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.06 10.69 127.77 1.37 1.31 16 2 N -0.41 -1.12 3.16 -534.31 -1.69 -2.81 16 3 C 0.03 0.01 9.94 83.48 0.83 0.84 16 4 C -0.18 -0.31 5.46 -20.12 -0.11 -0.42 16 5 C -0.05 0.07 3.01 71.23 0.21 0.28 16 6 O -0.56 -1.00 12.85 -148.98 -1.92 -2.92 16 7 Si 0.76 -2.44 30.60 68.60 2.10 -0.34 16 8 C -0.11 -0.20 10.29 22.57 0.23 0.03 16 9 C -0.08 -0.32 6.89 40.35 0.28 -0.04 16 10 C 0.59 2.85 7.77 86.45 0.67 3.52 16 11 O -0.58 -6.31 14.25 -4.31 -0.06 -6.37 16 12 N -0.69 1.48 5.24 -443.71 -2.33 -0.85 16 13 C 0.12 -0.48 4.30 45.57 0.20 -0.28 16 14 H 0.09 -0.06 7.53 -2.39 -0.02 -0.08 16 15 C -0.14 0.80 7.27 31.18 0.23 1.02 16 16 C -0.07 0.55 3.85 -11.01 -0.04 0.51 16 17 H 0.11 -0.98 8.08 -2.38 -0.02 -1.00 16 18 C -0.07 0.47 5.28 -19.90 -0.11 0.36 16 19 C -0.07 0.26 9.41 22.54 0.21 0.47 16 20 C -0.05 0.05 5.73 -21.36 -0.12 -0.08 16 21 C 0.28 1.48 15.33 88.33 1.35 2.83 16 22 N -0.47 -5.58 18.54 19.00 0.35 -5.23 16 23 C -0.08 0.32 9.76 22.54 0.22 0.54 16 24 C -0.12 0.86 10.03 22.23 0.22 1.08 16 25 C -0.08 0.65 8.53 22.33 0.19 0.84 16 26 C -0.12 1.09 7.29 31.12 0.23 1.31 16 27 H 0.09 -0.29 8.14 -2.39 -0.02 -0.30 16 28 H 0.11 -0.63 8.14 -2.38 -0.02 -0.65 16 29 H 0.09 0.31 6.12 -2.39 -0.01 0.30 16 30 H 0.19 -1.01 6.21 -2.92 -0.02 -1.03 16 31 H 0.09 -0.46 7.96 -2.38 -0.02 -0.48 16 32 H 0.39 -2.36 8.74 -74.06 -0.65 -3.01 16 33 H -0.29 -0.46 7.11 99.48 0.71 0.25 16 34 H -0.30 -1.09 7.11 99.48 0.71 -0.38 16 35 H 0.16 -0.44 7.45 -2.91 -0.02 -0.46 16 36 H 0.41 -2.75 7.60 -92.71 -0.70 -3.45 16 37 H 0.06 -0.14 8.14 -2.39 -0.02 -0.15 16 38 H 0.11 -0.82 6.39 -2.39 -0.02 -0.84 16 39 H 0.14 -0.77 8.05 -2.91 -0.02 -0.79 16 40 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 41 H 0.16 -1.81 8.06 -2.91 -0.02 -1.84 16 42 H 0.15 -1.77 6.71 -2.91 -0.02 -1.79 16 43 H 0.11 -1.18 7.63 -2.39 -0.02 -1.20 16 44 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 Total: 0.00 -25.29 376.85 2.27 -23.02 By element: Atomic # 1 Polarization: -18.39 SS G_CDS: -0.25 Total: -18.64 kcal Atomic # 6 Polarization: 8.08 SS G_CDS: 6.06 Total: 14.14 kcal Atomic # 7 Polarization: -5.22 SS G_CDS: -3.66 Total: -8.88 kcal Atomic # 8 Polarization: -7.32 SS G_CDS: -1.98 Total: -9.29 kcal Atomic # 14 Polarization: -2.44 SS G_CDS: 2.10 Total: -0.34 kcal Total: -25.29 2.27 -23.02 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_10803934.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.715 kcal (2) G-P(sol) polarization free energy of solvation -25.292 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.023 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds