Wall clock time and date at job start Tue Mar 9 2021 12:50:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.39612 * 120.14733 * 226.89052 * 3 2 1 5 5 C 1.37970 * 119.84010 * 180.02562 * 4 3 2 6 6 C 1.38333 * 120.15348 * 359.97438 * 5 4 3 7 7 C 1.38385 * 120.30847 * 0.02562 * 6 5 4 8 8 C 1.50700 * 119.92733 * 179.97438 * 7 6 5 9 9 H 1.09000 * 112.90891 * 191.25005 * 8 7 6 10 10 C 1.53786 * 113.61233 * 322.50023 * 8 7 6 11 11 C 1.53774 * 87.08098 * 139.98368 * 10 8 7 12 12 H 1.09006 * 113.68954 * 220.00702 * 11 10 8 13 13 N 1.46505 * 113.61597 * 89.11511 * 11 10 8 14 14 C 1.34777 * 119.99724 * 107.50390 * 13 11 10 15 15 O 1.21723 * 120.00181 * 359.97438 * 14 13 11 16 16 C 1.46566 * 119.99859 * 179.72469 * 14 13 11 17 17 C 1.40853 * 126.58092 * 180.27190 * 16 14 13 18 18 C 1.40090 * 132.86518 * 0.04185 * 17 16 14 19 19 C 1.36448 * 119.25254 * 179.97438 * 18 17 16 20 20 C 1.50698 * 120.29843 * 179.97438 * 19 18 17 21 21 O 1.42897 * 109.47550 * 240.02495 * 20 19 18 22 22 Si 1.86305 * 109.47372 * 120.01713 * 20 19 18 23 23 C 1.40169 * 119.41024 * 359.97147 * 19 18 17 24 24 C 1.35181 * 120.31461 * 0.02562 * 23 19 18 25 25 N 1.36242 * 120.71081 * 0.02562 * 24 23 19 26 26 N 1.40013 * 132.01219 * 180.02562 * 25 24 23 27 27 C 1.30742 * 109.60540 * 179.68482 * 26 25 24 28 28 C 1.53776 * 87.08146 * 334.56554 * 11 10 8 29 29 C 1.37925 * 120.14983 * 0.24689 * 7 6 5 30 30 H 1.07995 * 120.08029 * 0.02562 * 4 3 2 31 31 H 1.08005 * 119.91893 * 180.02562 * 5 4 3 32 32 H 1.08006 * 119.84835 * 180.02562 * 6 5 4 33 33 H 1.09001 * 113.61468 * 25.43382 * 10 8 7 34 34 H 1.09001 * 113.60973 * 254.53328 * 10 8 7 35 35 H 0.97000 * 119.99792 * 287.49957 * 13 11 10 36 36 H 1.07996 * 120.37448 * 359.93359 * 18 17 16 37 37 H 1.09005 * 109.47011 * 0.02562 * 20 19 18 38 38 H 0.96710 * 113.99506 * 299.99690 * 21 20 19 39 39 H 1.48508 * 109.99450 * 58.68549 * 22 20 19 40 40 H 1.48496 * 110.00007 * 180.02562 * 22 20 19 41 41 H 1.08000 * 119.83778 * 179.97438 * 23 19 18 42 42 H 1.08009 * 119.64531 * 180.02562 * 24 23 19 43 43 H 1.08003 * 125.63256 * 180.29699 * 27 26 25 44 44 H 1.09002 * 113.61634 * 139.98104 * 28 11 10 45 45 H 1.09003 * 113.61635 * 270.88631 * 28 11 10 46 46 H 1.07999 * 120.08096 * 179.74744 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2688 0.8260 0.8814 5 6 4.6485 0.8220 0.8756 6 6 5.3373 0.0023 -0.0003 7 6 4.6490 -0.8183 -0.8766 8 6 5.4081 -1.7074 -1.8276 9 1 4.7709 -2.1540 -2.5910 10 6 6.6835 -1.0592 -2.3917 11 6 7.3585 -2.4311 -2.2283 12 1 8.3844 -2.3739 -1.8641 13 7 7.2189 -3.2974 -3.4016 14 6 8.2819 -3.5321 -4.1962 15 8 9.3578 -3.0240 -3.9395 16 6 8.1437 -4.4036 -5.3665 17 6 9.1575 -4.7461 -6.2824 18 6 10.5126 -4.4035 -6.3763 19 6 11.2579 -4.9060 -7.4028 20 6 12.7175 -4.5524 -7.5267 21 8 12.9443 -3.8958 -8.7754 22 14 13.7420 -6.1065 -7.4470 23 6 10.6538 -5.7542 -8.3411 24 6 9.3443 -6.0713 -8.2306 25 7 8.5916 -5.5738 -7.2098 26 7 7.2433 -5.7414 -6.8716 27 6 6.9750 -5.0611 -5.7879 28 6 6.3280 -2.7190 -1.1239 29 6 3.2698 -0.8202 -0.8855 30 1 2.7323 1.4661 1.5660 31 1 5.1919 1.4596 1.5572 32 1 6.4174 0.0027 -0.0004 33 1 7.1026 -0.2868 -1.7469 34 1 6.5886 -0.7401 -3.4296 35 1 6.3614 -3.7021 -3.6063 36 1 10.9621 -3.7484 -5.6447 37 1 13.0010 -3.8882 -6.7102 38 1 12.7135 -4.4297 -9.5481 39 1 13.3430 -7.0341 -8.5360 40 1 15.1836 -5.7712 -7.5675 41 1 11.2371 -6.1556 -9.1566 42 1 8.8899 -6.7262 -8.9595 43 1 6.0138 -5.0116 -5.2979 44 1 5.9461 -3.7398 -1.1382 45 1 6.6499 -2.4003 -0.1325 46 1 2.7337 -1.4580 -1.5727 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_11618758.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:57 Heat of formation + Delta-G solvation = 126.194992 kcal Electronic energy + Delta-G solvation = -31513.250493 eV Core-core repulsion = 27144.443431 eV Total energy + Delta-G solvation = -4368.807062 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.137 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.34014 -41.61683 -40.31686 -39.48978 -38.82762 -37.37270 -37.28169 -34.54718 -34.20541 -32.37746 -32.18929 -32.06776 -30.27460 -27.45599 -26.82302 -26.34212 -25.18957 -24.83484 -23.81610 -23.15889 -22.86054 -21.37145 -20.73861 -19.25401 -18.97934 -18.67327 -17.99676 -17.60248 -17.40094 -17.07818 -16.97215 -16.64948 -16.48975 -16.09368 -15.88561 -15.60073 -15.51849 -15.28774 -15.06531 -14.94292 -14.80842 -14.42960 -14.29499 -14.13993 -13.98434 -13.87420 -13.68817 -13.59647 -13.55701 -13.30134 -13.02725 -12.91829 -12.64770 -12.51459 -12.13286 -11.96409 -11.92137 -11.79832 -11.59038 -11.33410 -10.94424 -10.80539 -10.40277 -10.06871 -10.03512 -9.80521 -8.80695 -5.08200 -0.59603 -0.28497 -0.19701 0.19540 0.95118 1.03343 1.08666 1.45622 1.71187 1.78142 1.92811 2.02457 2.17462 2.55073 2.78909 2.85074 3.01426 3.11086 3.24044 3.34709 3.39150 3.55252 3.59176 3.62788 3.72987 3.80643 3.84787 3.93850 3.95875 4.00867 4.08045 4.13238 4.21270 4.29877 4.34674 4.47008 4.57596 4.60529 4.64773 4.66748 4.78985 4.83634 4.87755 4.95377 5.03518 5.05859 5.12448 5.19589 5.22542 5.24224 5.41193 5.59390 5.61998 5.70524 6.18819 6.27027 6.52006 6.57002 7.36143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.250 3.750 3 C -0.026 4.026 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.071 4.071 8 C -0.076 4.076 9 H 0.100 0.900 10 C -0.145 4.145 11 C 0.124 3.876 12 H 0.108 0.892 13 N -0.713 5.713 14 C 0.605 3.395 15 O -0.546 6.546 16 C -0.316 4.316 17 C 0.170 3.830 18 C -0.090 4.090 19 C -0.065 4.065 20 C -0.075 4.075 21 O -0.521 6.521 22 Si 0.696 3.304 23 C -0.162 4.162 24 C 0.123 3.877 25 N -0.267 5.267 26 N -0.313 5.313 27 C 0.120 3.880 28 C -0.136 4.136 29 C -0.067 4.067 30 H 0.133 0.867 31 H 0.135 0.865 32 H 0.133 0.867 33 H 0.096 0.904 34 H 0.076 0.924 35 H 0.398 0.602 36 H 0.166 0.834 37 H 0.127 0.873 38 H 0.375 0.625 39 H -0.253 1.253 40 H -0.247 1.247 41 H 0.157 0.843 42 H 0.177 0.823 43 H 0.198 0.802 44 H 0.078 0.922 45 H 0.100 0.900 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.171 -3.033 0.370 5.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.088 5.088 2 C -0.065 4.065 3 C -0.029 4.029 4 C -0.095 4.095 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.071 4.071 8 C -0.094 4.094 9 H 0.119 0.881 10 C -0.184 4.184 11 C 0.018 3.982 12 H 0.126 0.874 13 N -0.363 5.363 14 C 0.394 3.606 15 O -0.424 6.424 16 C -0.331 4.331 17 C 0.049 3.951 18 C -0.110 4.110 19 C -0.071 4.071 20 C -0.184 4.184 21 O -0.327 6.327 22 Si 0.594 3.406 23 C -0.183 4.183 24 C -0.003 4.003 25 N -0.031 5.031 26 N -0.133 5.133 27 C -0.061 4.061 28 C -0.174 4.174 29 C -0.088 4.088 30 H 0.150 0.850 31 H 0.153 0.847 32 H 0.150 0.850 33 H 0.115 0.885 34 H 0.095 0.905 35 H 0.233 0.767 36 H 0.183 0.817 37 H 0.145 0.855 38 H 0.223 0.777 39 H -0.177 1.177 40 H -0.171 1.171 41 H 0.174 0.826 42 H 0.194 0.806 43 H 0.215 0.785 44 H 0.097 0.903 45 H 0.118 0.882 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.322 -3.511 -0.346 4.845 hybrid contribution -0.410 0.666 -0.635 1.007 sum 2.912 -2.844 -0.981 4.187 Atomic orbital electron populations 1.81306 1.12086 1.07756 1.07643 1.25753 0.92712 0.94023 0.94031 1.15992 0.84276 1.01777 1.00852 1.21235 0.94540 0.96831 0.96875 1.21130 0.93563 0.99382 0.99260 1.21313 1.00694 0.94442 0.94085 1.19608 0.92709 0.97528 0.97256 1.21643 0.95158 0.95942 0.96657 0.88150 1.23598 0.94957 0.97286 1.02509 1.21792 1.00714 0.90062 0.85589 0.87435 1.45360 1.12705 1.50849 1.27420 1.16797 0.83600 0.79221 0.80940 1.90789 1.26753 1.52048 1.72857 1.19588 0.93449 1.15805 1.04237 1.19292 0.93770 0.92038 0.89955 1.20698 0.89656 1.00759 0.99849 1.20423 0.97277 0.95089 0.94324 1.25081 0.94456 1.09031 0.89866 1.86712 1.87939 1.43555 1.14533 0.94417 0.79372 0.76483 0.90344 1.20713 0.93665 1.01810 1.02149 1.21518 0.90563 0.98084 0.90108 1.46078 1.08603 1.30396 1.17994 1.77649 0.88816 1.27746 1.19073 1.24069 0.98756 0.91385 0.91880 1.23449 0.95593 0.99773 0.98577 1.21082 0.93679 0.97034 0.97002 0.84952 0.84700 0.84960 0.88539 0.90509 0.76708 0.81691 0.85537 0.77707 1.17691 1.17104 0.82593 0.80562 0.78505 0.90291 0.88185 0.85039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.04 18.54 41.84 0.78 -1.27 16 2 C 0.25 0.51 15.33 -22.47 -0.34 0.17 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.34 10.03 -39.64 -0.40 -0.06 16 6 C -0.09 0.27 8.60 -39.49 -0.34 -0.07 16 7 C -0.07 0.19 5.28 -104.68 -0.55 -0.36 16 8 C -0.08 0.29 3.85 -90.96 -0.35 -0.06 16 9 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 10 C -0.14 0.41 7.25 -25.92 -0.19 0.22 16 11 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 12 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 13 N -0.71 1.21 5.25 -54.35 -0.29 0.93 16 14 C 0.61 1.02 7.78 -12.90 -0.10 0.92 16 15 O -0.55 -2.64 15.30 5.17 0.08 -2.57 16 16 C -0.32 -0.45 6.17 -104.68 -0.65 -1.09 16 17 C 0.17 0.33 6.76 -84.07 -0.57 -0.24 16 18 C -0.09 -0.06 9.35 -39.53 -0.37 -0.43 16 19 C -0.07 0.08 4.53 -104.54 -0.47 -0.39 16 20 C -0.08 0.14 2.84 36.00 0.10 0.24 16 21 O -0.52 0.22 12.88 -35.23 -0.45 -0.24 16 22 Si 0.70 -1.83 31.97 -169.99 -5.43 -7.26 16 23 C -0.16 0.41 8.38 -39.95 -0.33 0.08 16 24 C 0.12 -0.18 11.17 -16.68 -0.19 -0.37 16 25 N -0.27 -0.36 3.86 -10.55 -0.04 -0.40 16 26 N -0.31 -0.59 12.57 30.75 0.39 -0.21 16 27 C 0.12 -0.02 11.44 -17.14 -0.20 -0.22 16 28 C -0.14 0.53 7.29 -25.92 -0.19 0.34 16 29 C -0.07 0.12 9.41 -39.17 -0.37 -0.24 16 30 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 31 H 0.14 -0.63 8.06 -52.48 -0.42 -1.05 16 32 H 0.13 -0.62 6.64 -52.48 -0.35 -0.96 16 33 H 0.10 -0.33 6.30 -51.93 -0.33 -0.66 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.40 -1.72 7.62 -40.82 -0.31 -2.03 16 36 H 0.17 0.15 7.01 -52.49 -0.37 -0.22 16 37 H 0.13 -0.28 7.71 -51.93 -0.40 -0.68 16 38 H 0.38 -1.50 8.09 45.56 0.37 -1.13 16 39 H -0.25 0.39 7.05 56.52 0.40 0.78 16 40 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 41 H 0.16 -0.82 7.26 -52.49 -0.38 -1.20 16 42 H 0.18 -0.73 8.06 -52.48 -0.42 -1.15 16 43 H 0.20 -0.89 7.46 -52.48 -0.39 -1.28 16 44 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 45 H 0.10 -0.42 7.72 -51.93 -0.40 -0.83 16 46 H 0.13 -0.39 8.05 -52.49 -0.42 -0.81 16 LS Contribution 399.69 15.07 6.02 6.02 Total: 0.00 -11.52 399.69 -10.84 -22.36 By element: Atomic # 1 Polarization: -9.28 SS G_CDS: -5.10 Total: -14.39 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: -6.79 Total: -2.98 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: 0.84 Total: -0.95 kcal Atomic # 8 Polarization: -2.43 SS G_CDS: -0.37 Total: -2.80 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: -5.43 Total: -7.26 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.52 -10.84 -22.36 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_11618758.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.556 kcal (2) G-P(sol) polarization free energy of solvation -11.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 137.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.361 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds