Wall clock time and date at job start Tue Mar 9 2021 12:51:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35665 * 116.99644 * 2 1 4 4 C 1.38402 * 120.12138 * 359.72173 * 3 2 1 5 5 C 1.38723 * 120.03223 * 179.72616 * 4 3 2 6 6 O 1.35708 * 119.86623 * 180.30481 * 5 4 3 7 7 C 1.42908 * 117.00029 * 0.24788 * 6 5 4 8 8 C 1.39146 * 120.27145 * 0.55300 * 5 4 3 9 9 C 1.50703 * 119.87942 * 179.70504 * 8 5 4 10 10 O 1.42896 * 109.47443 * 75.02315 * 9 8 5 11 11 Si 1.86302 * 109.46848 * 195.02532 * 9 8 5 12 12 C 1.37582 * 120.24182 * 359.72455 * 8 5 4 13 13 C 1.39817 * 119.96339 * 0.02562 * 12 8 5 14 14 C 1.47303 * 120.13627 * 180.02562 * 13 12 8 15 15 O 1.21627 * 120.00061 * 179.97438 * 14 13 12 16 16 N 1.34772 * 120.00246 * 359.97438 * 14 13 12 17 17 C 1.46498 * 120.00658 * 180.02562 * 16 14 13 18 18 H 1.09001 * 112.84561 * 336.19117 * 17 16 14 19 19 C 1.53775 * 113.61832 * 107.49630 * 17 16 14 20 20 C 1.53774 * 87.08124 * 89.11963 * 19 17 16 21 21 H 1.09004 * 113.69491 * 270.87258 * 20 19 17 22 22 C 1.50703 * 113.61809 * 139.97958 * 20 19 17 23 23 C 1.37924 * 119.92632 * 142.49946 * 22 20 19 24 24 C 1.39646 * 119.84722 * 179.97438 * 23 22 20 25 25 C 1.43203 * 120.15229 * 179.97438 * 24 23 22 26 26 N 9.24400 * 113.70633 * 16.33188 * 11 1 2 27 27 C 1.39609 * 119.69911 * 0.02562 * 24 23 22 28 28 C 1.37966 * 119.84880 * 359.97438 * 27 24 23 29 29 C 1.38342 * 120.14976 * 359.74783 * 28 27 24 30 30 C 1.53774 * 113.61620 * 205.00071 * 17 16 14 31 31 H 1.09002 * 109.47382 * 60.00116 * 1 2 3 32 32 H 1.09001 * 109.46938 * 300.00103 * 1 2 3 33 33 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 34 34 H 1.08004 * 119.98151 * 359.97438 * 4 3 2 35 35 H 1.08994 * 109.46999 * 180.02562 * 7 6 5 36 36 H 1.09000 * 109.46794 * 300.00337 * 7 6 5 37 37 H 1.09000 * 109.46316 * 60.00336 * 7 6 5 38 38 H 1.09003 * 109.46724 * 315.02268 * 9 8 5 39 39 H 0.96704 * 113.99810 * 300.00143 * 10 9 8 40 40 H 1.48500 * 110.00045 * 298.67483 * 11 9 8 41 41 H 1.48499 * 110.00313 * 59.99695 * 11 9 8 42 42 H 1.08003 * 120.02078 * 180.02562 * 12 8 5 43 43 H 0.97006 * 120.00045 * 359.97438 * 16 14 13 44 44 H 1.09002 * 113.61773 * 203.66601 * 19 17 16 45 45 H 1.09000 * 113.61406 * 334.57031 * 19 17 16 46 46 H 1.07999 * 120.07562 * 359.96504 * 23 22 20 47 47 H 1.08008 * 120.07770 * 179.97438 * 27 24 23 48 48 H 1.07995 * 119.93024 * 180.02562 * 28 27 24 49 49 H 1.08000 * 119.85196 * 180.25557 * 29 28 27 50 50 H 1.09000 * 113.61673 * 25.42603 * 30 17 16 51 51 H 1.09002 * 113.61858 * 156.33229 * 30 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2935 2.3711 -0.0058 5 6 1.9251 3.6062 -0.0001 6 8 1.1850 4.7437 0.0005 7 6 -0.2362 4.5931 0.0004 8 6 3.3144 3.6836 0.0000 9 6 3.9913 5.0300 -0.0005 10 8 3.8942 5.6125 1.3007 11 14 5.7859 4.8226 -0.4557 12 6 4.0723 2.5354 0.0000 13 6 3.4461 1.2853 -0.0005 14 6 4.2539 0.0535 0.0001 15 8 3.7066 -1.0327 0.0001 16 7 5.5995 0.1300 0.0006 17 6 6.4029 -1.0950 0.0006 18 1 5.8664 -1.9530 0.4057 19 6 7.0955 -1.3776 -1.3429 20 6 8.2752 -0.5404 -0.8212 21 1 8.1908 0.5230 -1.0454 22 6 9.6241 -1.1087 -1.1798 23 6 10.6616 -0.2622 -1.5105 24 6 11.9110 -0.7905 -1.8420 25 6 12.9926 0.0824 -2.1869 26 7 13.8497 0.7735 -2.4638 27 6 12.1006 -2.1737 -1.8368 28 6 11.0541 -3.0089 -1.5040 29 6 9.8206 -2.4785 -1.1711 30 6 7.8083 -0.9099 0.5967 31 1 -0.3634 0.5138 -0.8900 32 1 -0.3633 0.5139 0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 0.2148 2.3164 -0.0108 35 1 -0.7057 5.5767 0.0004 36 1 -0.5433 4.0442 -0.8898 37 1 -0.5432 4.0435 0.8902 38 1 3.5050 5.6809 -0.7272 39 1 2.9861 5.7498 1.6034 40 1 6.4677 3.9630 0.5450 41 1 5.9005 4.2176 -1.8071 42 1 5.1504 2.5996 0.0004 43 1 6.0360 0.9962 0.0002 44 1 7.3400 -2.4288 -1.4957 45 1 6.5880 -0.9314 -2.1981 46 1 10.5080 0.8068 -1.5132 47 1 13.0643 -2.5890 -2.0926 48 1 11.1994 -4.0791 -1.4991 49 1 9.0059 -3.1367 -0.9074 50 1 7.8762 -0.0862 1.3073 51 1 8.2476 -1.8333 0.9742 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12297780.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:04 Heat of formation + Delta-G solvation = -20.358859 kcal Electronic energy + Delta-G solvation = -36209.769892 eV Core-core repulsion = 31429.009879 eV Total energy + Delta-G solvation = -4780.760014 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.161 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.21557 -41.57085 -40.50870 -39.99208 -38.94096 -38.38246 -37.29147 -36.96559 -34.58196 -32.41755 -32.36568 -32.26422 -31.38814 -29.19588 -28.37483 -26.84108 -26.47438 -26.09019 -25.10250 -24.50698 -23.19823 -22.76951 -21.63311 -20.78688 -20.08990 -19.12943 -18.71076 -18.56505 -17.79398 -17.45653 -17.37044 -17.25585 -16.96621 -16.70314 -16.55186 -16.42700 -16.07559 -15.85855 -15.68276 -15.60370 -15.37394 -15.07985 -14.99245 -14.66920 -14.33900 -14.21996 -14.13757 -14.07800 -13.94896 -13.70329 -13.68268 -13.59343 -13.39245 -13.03106 -12.93514 -12.88333 -12.72127 -12.65050 -12.62529 -12.22431 -11.94612 -11.82496 -11.76170 -11.36643 -11.34112 -11.10699 -10.73486 -10.09851 -10.04861 -10.00218 -9.80979 -9.22397 -4.89178 -0.31709 -0.28401 0.03508 0.19368 1.30225 1.57454 1.72078 1.76985 1.84178 1.87830 1.93243 2.04058 2.07372 2.60936 2.79067 2.85439 3.29978 3.35135 3.43797 3.53749 3.58164 3.63588 3.65163 3.73075 3.83452 3.86161 3.91544 3.95366 3.95644 3.97319 4.02238 4.05186 4.06734 4.12731 4.14586 4.31303 4.34253 4.37849 4.46283 4.56321 4.59421 4.63529 4.69110 4.73756 4.80479 4.84989 4.87594 4.92906 4.95386 5.04477 5.18563 5.19506 5.23793 5.39878 5.57547 5.70273 5.85210 6.18595 6.47511 6.52546 6.57910 7.29081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.233 3.767 4 C -0.308 4.308 5 C 0.210 3.790 6 O -0.306 6.306 7 C 0.022 3.978 8 C -0.188 4.188 9 C -0.068 4.068 10 O -0.536 6.536 11 Si 0.739 3.261 12 C -0.011 4.011 13 C -0.206 4.206 14 C 0.569 3.431 15 O -0.513 6.513 16 N -0.717 5.717 17 C 0.122 3.878 18 H 0.109 0.891 19 C -0.144 4.144 20 C -0.077 4.077 21 H 0.099 0.901 22 C -0.071 4.071 23 C -0.068 4.068 24 C -0.025 4.025 25 C 0.250 3.750 26 N -0.412 5.412 27 C -0.074 4.074 28 C -0.115 4.115 29 C -0.087 4.087 30 C -0.137 4.137 31 H 0.058 0.942 32 H 0.058 0.942 33 H 0.108 0.892 34 H 0.147 0.853 35 H 0.109 0.891 36 H 0.060 0.940 37 H 0.061 0.939 38 H 0.076 0.924 39 H 0.366 0.634 40 H -0.250 1.250 41 H -0.245 1.245 42 H 0.135 0.865 43 H 0.395 0.605 44 H 0.098 0.902 45 H 0.076 0.924 46 H 0.132 0.868 47 H 0.133 0.867 48 H 0.135 0.865 49 H 0.132 0.868 50 H 0.078 0.922 51 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.797 0.940 0.567 5.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.184 3.816 4 C -0.328 4.328 5 C 0.162 3.838 6 O -0.218 6.218 7 C -0.072 4.072 8 C -0.189 4.189 9 C -0.177 4.177 10 O -0.341 6.341 11 Si 0.637 3.363 12 C -0.030 4.030 13 C -0.210 4.210 14 C 0.357 3.643 15 O -0.389 6.389 16 N -0.370 5.370 17 C 0.016 3.984 18 H 0.127 0.873 19 C -0.182 4.182 20 C -0.095 4.095 21 H 0.117 0.883 22 C -0.071 4.071 23 C -0.088 4.088 24 C -0.028 4.028 25 C -0.065 4.065 26 N -0.087 5.087 27 C -0.094 4.094 28 C -0.133 4.133 29 C -0.105 4.105 30 C -0.175 4.175 31 H 0.076 0.924 32 H 0.076 0.924 33 H 0.127 0.873 34 H 0.164 0.836 35 H 0.127 0.873 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.094 0.906 39 H 0.214 0.786 40 H -0.175 1.175 41 H -0.169 1.169 42 H 0.152 0.848 43 H 0.230 0.770 44 H 0.117 0.883 45 H 0.095 0.905 46 H 0.150 0.850 47 H 0.151 0.849 48 H 0.153 0.847 49 H 0.150 0.850 50 H 0.097 0.903 51 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -3.489 0.627 -0.115 3.547 hybrid contribution -2.286 -0.358 0.244 2.327 sum -5.776 0.269 0.129 5.783 Atomic orbital electron populations 1.23259 0.78121 1.04971 1.01337 1.86407 1.21264 1.24895 1.85756 1.18691 0.90530 0.84512 0.87916 1.21295 1.01161 0.91425 1.18895 1.18714 0.90235 0.84871 0.89938 1.86040 1.19945 1.28729 1.87123 1.23234 0.77289 1.04835 1.01868 1.19451 0.90480 0.96741 1.12223 1.25096 1.13583 0.90363 0.88672 1.86713 1.32183 1.83253 1.31922 0.92861 0.75935 0.88441 0.79055 1.20756 0.98842 0.90307 0.93065 1.19064 0.90796 0.93504 1.17670 1.17769 0.81634 0.88576 0.76283 1.90851 1.71273 1.28538 1.48242 1.45585 1.05840 1.08972 1.76576 1.21826 0.91141 0.88474 0.96924 0.87302 1.23591 0.95466 1.01093 0.98094 1.21646 0.90723 1.00091 0.97067 0.88321 1.19588 0.94781 0.93336 0.99388 1.21081 0.90702 1.00288 0.96736 1.15981 0.89732 0.91133 1.05995 1.25711 0.93295 0.93580 0.93933 1.81279 1.09993 1.08844 1.08565 1.21236 0.99905 0.91156 0.97142 1.21127 0.92501 1.00384 0.99294 1.21307 0.97486 0.94657 0.97065 1.23462 0.94641 1.03499 0.95848 0.92369 0.92355 0.87342 0.83574 0.87269 0.92125 0.92056 0.90615 0.78625 1.17467 1.16938 0.84785 0.76963 0.88349 0.90504 0.85030 0.84907 0.84678 0.84983 0.90308 0.87980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.95 8.56 -40.62 -0.35 -1.30 16 3 C 0.23 0.67 6.70 -38.73 -0.26 0.41 16 4 C -0.31 -0.20 8.01 -39.34 -0.31 -0.51 16 5 C 0.21 0.18 6.62 -39.07 -0.26 -0.08 16 6 O -0.31 0.16 9.36 -18.83 -0.18 -0.02 16 7 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 8 C -0.19 -0.25 5.27 -104.52 -0.55 -0.80 16 9 C -0.07 -0.02 2.32 36.01 0.08 0.07 16 10 O -0.54 -0.53 12.65 -35.23 -0.45 -0.98 16 11 Si 0.74 -0.82 30.40 -169.99 -5.17 -5.99 16 12 C -0.01 -0.02 8.14 -39.23 -0.32 -0.34 16 13 C -0.21 -0.63 5.89 -104.83 -0.62 -1.24 16 14 C 0.57 2.19 7.76 -12.58 -0.10 2.09 16 15 O -0.51 -3.68 14.75 -16.67 -0.25 -3.92 16 16 N -0.72 -0.48 5.21 -54.14 -0.28 -0.76 16 17 C 0.12 -0.06 4.32 -67.13 -0.29 -0.35 16 18 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 19 C -0.14 0.24 7.25 -25.93 -0.19 0.05 16 20 C -0.08 0.19 3.85 -90.96 -0.35 -0.16 16 21 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 22 C -0.07 0.14 5.28 -104.68 -0.55 -0.42 16 23 C -0.07 0.08 9.41 -39.17 -0.37 -0.29 16 24 C -0.03 0.01 5.73 -106.93 -0.61 -0.61 16 25 C 0.25 0.58 15.33 -22.49 -0.34 0.23 16 26 N -0.41 -2.11 18.53 41.81 0.77 -1.34 16 27 C -0.07 0.11 9.76 -39.17 -0.38 -0.27 16 28 C -0.12 0.29 10.03 -39.64 -0.40 -0.11 16 29 C -0.09 0.22 8.59 -39.49 -0.34 -0.12 16 30 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 31 H 0.06 -0.15 7.65 -51.93 -0.40 -0.54 16 32 H 0.06 -0.15 7.67 -51.93 -0.40 -0.54 16 33 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 34 H 0.15 -0.28 4.50 -52.48 -0.24 -0.51 16 35 H 0.11 -0.56 8.14 -51.93 -0.42 -0.99 16 36 H 0.06 -0.25 7.64 -51.93 -0.40 -0.65 16 37 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 38 H 0.08 -0.04 7.82 -51.93 -0.41 -0.44 16 39 H 0.37 -0.34 8.59 45.56 0.39 0.05 16 40 H -0.25 -0.04 6.80 56.52 0.38 0.34 16 41 H -0.25 0.02 7.11 56.52 0.40 0.42 16 42 H 0.14 -0.01 3.24 -52.48 -0.17 -0.18 16 43 H 0.40 -0.46 6.72 -40.82 -0.27 -0.74 16 44 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 45 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.13 -0.30 8.05 -52.49 -0.42 -0.73 16 47 H 0.13 -0.35 8.06 -52.48 -0.42 -0.78 16 48 H 0.14 -0.58 8.06 -52.49 -0.42 -1.01 16 49 H 0.13 -0.53 6.66 -52.49 -0.35 -0.88 16 50 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 51 H 0.10 -0.33 7.71 -51.93 -0.40 -0.73 16 LS Contribution 424.98 15.07 6.40 6.40 Total: 0.00 -9.99 424.98 -10.20 -20.19 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -6.34 Total: -11.87 kcal Atomic # 6 Polarization: 3.95 SS G_CDS: -4.37 Total: -0.42 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: 0.49 Total: -2.10 kcal Atomic # 8 Polarization: -5.00 SS G_CDS: -1.22 Total: -6.21 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.17 Total: -5.99 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -9.99 -10.20 -20.19 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12297780.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.171 kcal (2) G-P(sol) polarization free energy of solvation -9.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.197 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.188 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds