Wall clock time and date at job start Tue Mar 9 2021 12:51:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39608 * 120.14639 * 175.13798 * 3 2 1 5 5 C 1.37974 * 119.84372 * 179.97438 * 4 3 2 6 6 C 1.38342 * 120.14875 * 0.27850 * 5 4 3 7 7 C 1.38385 * 120.30524 * 359.44605 * 6 5 4 8 8 C 1.50701 * 119.92116 * 180.25592 * 7 6 5 9 9 H 1.08999 * 112.84886 * 191.49031 * 8 7 6 10 10 C 1.53776 * 113.61614 * 322.79706 * 8 7 6 11 11 C 1.53787 * 87.08112 * 139.98387 * 10 8 7 12 12 H 1.09000 * 113.60736 * 220.02102 * 11 10 8 13 13 N 1.46490 * 113.61342 * 89.11740 * 11 10 8 14 14 C 1.34775 * 120.00299 * 107.50453 * 13 11 10 15 15 O 1.21568 * 119.99893 * 359.97438 * 14 13 11 16 16 C 1.47695 * 120.00356 * 179.97438 * 14 13 11 17 17 C 1.39823 * 120.16587 * 179.97438 * 16 14 13 18 18 F 1.35097 * 120.11032 * 359.97438 * 17 16 14 19 19 C 1.38321 * 119.77804 * 180.02562 * 17 16 14 20 20 C 1.38204 * 120.11606 * 359.97438 * 19 17 16 21 21 C 1.38458 * 120.34076 * 359.97438 * 20 19 17 22 22 C 1.50698 * 119.88813 * 180.02562 * 21 20 19 23 23 O 1.42906 * 109.47066 * 244.99887 * 22 21 20 24 24 Si 1.86296 * 109.47464 * 5.00026 * 22 21 20 25 25 C 1.37853 * 120.21694 * 359.76010 * 21 20 19 26 26 C 1.53777 * 87.07898 * 334.56576 * 11 10 8 27 27 C 1.37922 * 120.15281 * 0.55119 * 7 6 5 28 28 H 1.08000 * 120.08035 * 359.95635 * 4 3 2 29 29 H 1.08002 * 119.92160 * 179.97438 * 5 4 3 30 30 H 1.08005 * 119.84349 * 179.71729 * 6 5 4 31 31 H 1.09005 * 113.61228 * 254.53185 * 10 8 7 32 32 H 1.08994 * 113.61444 * 25.43465 * 10 8 7 33 33 H 0.96999 * 120.00284 * 287.49971 * 13 11 10 34 34 H 1.08000 * 119.94359 * 180.02562 * 19 17 16 35 35 H 1.07999 * 119.83040 * 179.97438 * 20 19 17 36 36 H 1.09002 * 109.47102 * 125.00157 * 22 21 20 37 37 H 0.96699 * 113.99793 * 60.00061 * 23 22 21 38 38 H 1.48500 * 110.00113 * 58.67894 * 24 22 21 39 39 H 1.48506 * 110.00064 * 180.02562 * 24 22 21 40 40 H 1.07997 * 120.06187 * 180.25445 * 25 21 20 41 41 H 1.08994 * 113.61592 * 270.88485 * 26 11 10 42 42 H 1.09005 * 113.61411 * 139.98025 * 26 11 10 43 43 H 1.07997 * 120.07946 * 179.75021 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2686 1.2039 -0.1023 5 6 4.6484 1.1973 -0.1012 6 6 5.3374 0.0015 -0.0047 7 6 4.6492 -1.1943 0.1027 8 6 5.4086 -2.4913 0.2131 9 1 4.7708 -3.3668 0.0914 10 6 6.6849 -2.5327 -0.6437 11 6 7.3589 -3.2536 0.5358 12 1 8.3842 -2.9307 0.7164 13 7 7.2197 -4.7111 0.4896 14 6 8.2831 -5.4803 0.1833 15 8 9.3578 -4.9645 -0.0553 16 6 8.1429 -6.9499 0.1373 17 6 9.2438 -7.7511 -0.1807 18 9 10.4404 -7.1837 -0.4478 19 6 9.1034 -9.1265 -0.2220 20 6 7.8792 -9.7070 0.0507 21 6 6.7861 -8.9184 0.3672 22 6 5.4561 -9.5622 0.6633 23 8 4.5109 -9.1861 -0.3404 24 14 5.6507 -11.4149 0.6699 25 6 6.9117 -7.5465 0.4176 26 6 6.3270 -2.5646 1.4443 27 6 3.2700 -1.2023 0.1028 28 1 2.7319 2.1376 -0.1825 29 1 5.1916 2.1273 -0.1807 30 1 6.4174 0.0017 -0.0089 31 1 6.5912 -3.1504 -1.5370 32 1 7.1039 -1.5481 -0.8507 33 1 6.3622 -5.1227 0.6797 34 1 9.9521 -9.7480 -0.4669 35 1 7.7746 -10.7814 0.0167 36 1 5.1012 -9.2306 1.6391 37 1 4.7624 -9.4498 -1.2361 38 1 6.6548 -11.8165 1.6877 39 1 4.3458 -12.0617 0.9602 40 1 6.0585 -6.9340 0.6688 41 1 6.6483 -1.5886 1.8081 42 1 5.9445 -3.2079 2.2367 43 1 2.7342 -2.1365 0.1827 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12335834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:07 Heat of formation + Delta-G solvation = 4.891970 kcal Electronic energy + Delta-G solvation = -29262.521093 eV Core-core repulsion = 24961.841683 eV Total energy + Delta-G solvation = -4300.679409 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.89884 -41.87035 -41.02517 -40.09877 -39.00442 -37.61958 -37.30778 -34.83912 -32.93864 -32.44163 -32.40371 -31.73611 -26.90848 -26.81633 -26.67846 -25.48720 -24.87126 -23.43995 -22.87570 -21.73315 -20.85696 -19.29315 -19.15868 -18.39463 -18.33889 -17.52864 -17.40718 -17.06891 -16.87044 -16.63102 -16.37582 -16.06928 -15.97650 -15.75931 -15.67689 -15.25218 -15.09493 -14.94766 -14.67439 -14.39629 -14.37931 -14.16794 -14.06835 -13.82852 -13.72114 -13.64828 -13.32456 -13.05650 -12.99876 -12.90155 -12.68615 -12.31741 -12.01142 -11.99178 -11.87552 -11.41429 -11.11082 -10.63575 -10.47804 -10.19231 -10.07907 -9.90712 -9.84349 -5.20582 -0.57174 -0.31382 -0.15923 0.16280 1.08653 1.46868 1.59478 1.69215 1.82373 1.87175 1.90272 2.41597 2.75947 2.82524 2.96408 3.17770 3.25661 3.31650 3.38059 3.46338 3.49611 3.54992 3.68685 3.77679 3.81655 3.91781 3.93478 3.96669 4.09555 4.22532 4.30511 4.38492 4.49156 4.54489 4.58311 4.60830 4.64429 4.74385 4.76557 4.80066 4.82893 4.86834 4.95529 4.98967 5.16513 5.20616 5.33415 5.46305 5.49054 5.67275 6.29361 6.35910 6.50050 7.06157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.101 0.899 10 C -0.144 4.144 11 C 0.119 3.881 12 H 0.109 0.891 13 N -0.708 5.708 14 C 0.562 3.438 15 O -0.517 6.517 16 C -0.175 4.175 17 C 0.168 3.832 18 F -0.110 7.110 19 C -0.156 4.156 20 C -0.058 4.058 21 C -0.140 4.140 22 C -0.066 4.066 23 O -0.538 6.538 24 Si 0.685 3.315 25 C -0.031 4.031 26 C -0.135 4.135 27 C -0.067 4.067 28 H 0.133 0.867 29 H 0.135 0.865 30 H 0.132 0.868 31 H 0.077 0.923 32 H 0.098 0.902 33 H 0.401 0.599 34 H 0.150 0.850 35 H 0.142 0.858 36 H 0.118 0.882 37 H 0.381 0.619 38 H -0.255 1.255 39 H -0.251 1.251 40 H 0.138 0.862 41 H 0.102 0.898 42 H 0.078 0.922 43 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.074 -2.972 -0.668 3.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.072 4.072 8 C -0.094 4.094 9 H 0.119 0.881 10 C -0.182 4.182 11 C 0.014 3.986 12 H 0.127 0.873 13 N -0.361 5.361 14 C 0.349 3.651 15 O -0.393 6.393 16 C -0.179 4.179 17 C 0.147 3.853 18 F -0.088 7.088 19 C -0.175 4.175 20 C -0.076 4.076 21 C -0.141 4.141 22 C -0.177 4.177 23 O -0.344 6.344 24 Si 0.587 3.413 25 C -0.050 4.050 26 C -0.173 4.173 27 C -0.088 4.088 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.150 0.850 31 H 0.096 0.904 32 H 0.117 0.883 33 H 0.237 0.763 34 H 0.168 0.832 35 H 0.159 0.841 36 H 0.135 0.865 37 H 0.229 0.771 38 H -0.179 1.179 39 H -0.176 1.176 40 H 0.156 0.844 41 H 0.120 0.880 42 H 0.097 0.903 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.755 -3.062 0.143 3.157 hybrid contribution 0.125 0.479 0.356 0.610 sum 0.880 -2.583 0.500 2.774 Atomic orbital electron populations 1.81311 1.12064 1.06926 1.08387 1.25744 0.92701 0.94105 0.94012 1.15987 0.84302 0.95076 1.07473 1.21243 0.94533 0.96741 0.96895 1.21135 0.93571 0.98698 0.99905 1.21312 1.00677 0.91692 0.96869 1.19581 0.92726 0.94974 0.99902 1.21641 0.95140 0.95065 0.97522 0.88116 1.23590 0.94903 1.01859 0.97853 1.21874 1.00961 0.79079 0.96693 0.87314 1.45529 1.12682 1.06339 1.71513 1.17957 0.84172 0.85926 0.77012 1.90877 1.26352 1.74445 1.47605 1.20048 0.94579 0.93681 1.09634 1.17748 0.80726 0.90851 0.95960 1.91634 1.42003 1.85196 1.89982 1.21183 0.99701 0.92628 1.03994 1.21086 0.91549 0.99849 0.95104 1.20331 0.96469 0.94024 1.03285 1.25040 0.87168 1.10875 0.94640 1.86525 1.45584 1.83100 1.19147 0.94792 0.81563 0.74946 0.90025 1.21016 0.95211 0.94469 0.94264 1.23451 0.95465 1.02018 0.96399 1.21080 0.93649 0.96798 0.97225 0.84903 0.84666 0.84982 0.90408 0.88329 0.76326 0.83176 0.84066 0.86501 0.77119 1.17936 1.17615 0.84412 0.87997 0.90288 0.85019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.03 18.54 41.84 0.78 -1.25 16 2 C 0.25 0.51 15.33 -22.47 -0.34 0.16 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.34 10.03 -39.64 -0.40 -0.06 16 6 C -0.09 0.27 8.62 -39.49 -0.34 -0.07 16 7 C -0.07 0.19 5.28 -104.68 -0.55 -0.36 16 8 C -0.08 0.28 3.85 -90.96 -0.35 -0.07 16 9 H 0.10 -0.44 8.09 -51.93 -0.42 -0.86 16 10 C -0.14 0.40 7.25 -25.92 -0.19 0.21 16 11 C 0.12 -0.23 4.32 -67.12 -0.29 -0.52 16 12 H 0.11 -0.02 7.47 -51.93 -0.39 -0.41 16 13 N -0.71 1.08 5.21 -54.01 -0.28 0.79 16 14 C 0.56 1.05 7.77 -12.40 -0.10 0.95 16 15 O -0.52 -3.10 14.94 5.31 0.08 -3.02 16 16 C -0.18 -0.07 5.88 -104.91 -0.62 -0.69 16 17 C 0.17 0.21 7.29 -38.96 -0.28 -0.08 16 18 F -0.11 -0.45 15.55 2.25 0.04 -0.41 16 19 C -0.16 0.25 10.01 -39.56 -0.40 -0.14 16 20 C -0.06 0.18 8.66 -39.51 -0.34 -0.16 16 21 C -0.14 0.38 5.34 -104.68 -0.56 -0.18 16 22 C -0.07 0.20 2.80 36.00 0.10 0.30 16 23 O -0.54 1.39 12.83 -35.23 -0.45 0.94 16 24 Si 0.69 -2.27 29.79 -169.99 -5.06 -7.34 16 25 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 26 C -0.14 0.50 7.29 -25.92 -0.19 0.32 16 27 C -0.07 0.12 9.41 -39.17 -0.37 -0.25 16 28 H 0.13 -0.39 8.06 -52.49 -0.42 -0.82 16 29 H 0.14 -0.63 8.06 -52.49 -0.42 -1.06 16 30 H 0.13 -0.61 6.63 -52.48 -0.35 -0.96 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.10 -0.34 6.29 -51.93 -0.33 -0.66 16 33 H 0.40 -1.60 6.73 -40.82 -0.27 -1.87 16 34 H 0.15 -0.52 8.06 -52.49 -0.42 -0.95 16 35 H 0.14 -0.76 4.88 -52.49 -0.26 -1.02 16 36 H 0.12 -0.34 7.96 -51.93 -0.41 -0.76 16 37 H 0.38 -2.36 8.70 45.56 0.40 -1.97 16 38 H -0.25 0.24 7.11 56.52 0.40 0.64 16 39 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 40 H 0.14 -0.56 6.41 -52.49 -0.34 -0.90 16 41 H 0.10 -0.42 7.73 -51.93 -0.40 -0.82 16 42 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 LS Contribution 374.27 15.07 5.64 5.64 Total: 0.00 -10.27 374.27 -10.34 -20.61 By element: Atomic # 1 Polarization: -9.68 SS G_CDS: -4.50 Total: -14.18 kcal Atomic # 6 Polarization: 4.79 SS G_CDS: -6.57 Total: -1.78 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: 0.49 Total: -0.46 kcal Atomic # 8 Polarization: -1.71 SS G_CDS: -0.37 Total: -2.08 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: -5.06 Total: -7.34 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -10.27 -10.34 -20.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12335834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.504 kcal (2) G-P(sol) polarization free energy of solvation -10.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.612 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds