Wall clock time and date at job start Tue Mar 9 2021 12:51:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39610 * 120.15111 * 351.80346 * 3 2 1 5 5 C 1.37965 * 119.84524 * 179.97438 * 4 3 2 6 6 C 1.38342 * 120.15122 * 0.02562 * 5 4 3 7 7 C 1.38382 * 120.30611 * 359.97438 * 6 5 4 8 8 C 1.50698 * 119.92681 * 179.97438 * 7 6 5 9 9 H 1.08997 * 112.85417 * 168.80191 * 8 7 6 10 10 C 1.53781 * 113.61342 * 299.99843 * 8 7 6 11 11 C 1.53786 * 87.17350 * 140.02323 * 10 8 7 12 12 H 1.09000 * 113.61138 * 220.06261 * 11 10 8 13 13 N 1.46496 * 113.61518 * 89.15486 * 11 10 8 14 14 C 1.34779 * 119.99390 * 154.99856 * 13 11 10 15 15 O 1.21585 * 120.00488 * 0.02562 * 14 13 11 16 16 C 1.47583 * 119.99647 * 180.02562 * 14 13 11 17 17 C 1.40204 * 119.83123 * 359.73166 * 16 14 13 18 18 C 1.36226 * 120.37649 * 179.73570 * 17 16 14 19 19 C 1.39873 * 119.96420 * 0.55439 * 18 17 16 20 20 C 1.40934 * 120.16405 * 359.69943 * 19 18 17 21 21 C 1.38652 * 119.48758 * 0.02562 * 20 19 18 22 22 N 1.37821 * 107.12879 * 180.02562 * 20 19 18 23 23 C 1.36569 * 109.86363 * 0.02562 * 22 20 19 24 24 C 1.34456 * 109.98153 * 0.02562 * 23 22 20 25 25 C 1.50696 * 126.48170 * 179.97438 * 24 23 22 26 26 O 1.42898 * 109.47068 * 255.01798 * 25 24 23 27 27 Si 1.86293 * 109.47211 * 15.02195 * 25 24 23 28 28 C 1.53782 * 113.68885 * 37.53412 * 8 7 6 29 29 C 1.37929 * 120.14964 * 0.25304 * 7 6 5 30 30 H 1.08003 * 120.07726 * 0.02579 * 4 3 2 31 31 H 1.08004 * 119.92764 * 179.97438 * 5 4 3 32 32 H 1.08004 * 119.84834 * 180.02562 * 6 5 4 33 33 H 1.09002 * 113.61445 * 254.61323 * 10 8 7 34 34 H 1.09002 * 113.61408 * 25.43053 * 10 8 7 35 35 H 0.97001 * 120.00117 * 335.00621 * 13 11 10 36 36 H 1.08004 * 119.81145 * 359.97438 * 17 16 14 37 37 H 1.08005 * 120.01846 * 180.23114 * 18 17 16 38 38 H 1.08006 * 120.16232 * 180.02562 * 21 20 19 39 39 H 0.96994 * 125.07151 * 179.97438 * 22 20 19 40 40 H 1.07995 * 125.00876 * 180.02562 * 23 22 20 41 41 H 1.09002 * 109.47224 * 135.02361 * 25 24 23 42 42 H 0.96704 * 114.00189 * 179.97438 * 26 25 24 43 43 H 1.48506 * 110.00155 * 178.68378 * 27 25 24 44 44 H 1.48502 * 110.00246 * 299.99966 * 27 25 24 45 45 H 1.08997 * 113.61668 * 334.55405 * 28 8 7 46 46 H 1.08998 * 113.61674 * 105.37914 * 28 8 7 47 47 H 1.07997 * 120.07817 * 179.74848 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2698 -1.1939 0.1721 5 6 4.6495 -1.1861 0.1705 6 6 5.3374 0.0019 -0.0005 7 6 4.6481 1.1896 -0.1717 8 6 5.4062 2.4788 -0.3567 9 1 4.7676 3.3037 -0.6727 10 6 6.3243 2.8288 0.8262 11 6 7.3569 3.2977 -0.2125 12 1 8.3822 3.0246 0.0369 13 7 7.2166 4.7078 -0.5842 14 6 8.2800 5.3897 -1.0540 15 8 9.3555 4.8345 -1.1698 16 6 8.1390 6.8104 -1.4279 17 6 6.8958 7.4456 -1.2983 18 6 6.7543 8.7580 -1.6351 19 6 7.8506 9.4758 -2.1242 20 6 9.1039 8.8465 -2.2638 21 6 9.2403 7.5119 -1.9132 22 7 9.9783 9.7890 -2.7603 23 6 9.3288 10.9773 -2.9365 24 6 8.0409 10.8557 -2.5700 25 6 6.9916 11.9366 -2.6116 26 8 6.7367 12.4043 -1.2857 27 14 7.5974 13.3500 -3.6631 28 6 6.6825 2.3293 -1.2014 29 6 3.2689 1.1969 -0.1675 30 1 2.7340 -2.1221 0.3053 31 1 5.1937 -2.1094 0.3040 32 1 6.4174 0.0023 -0.0014 33 1 5.9404 3.6329 1.4540 34 1 6.6464 1.9603 1.4008 35 1 6.3585 5.1506 -0.4921 36 1 6.0464 6.8923 -0.9257 37 1 5.7949 9.2425 -1.5294 38 1 10.1959 7.0189 -2.0154 39 1 10.9155 9.6320 -2.9549 40 1 9.7828 11.8814 -3.3144 41 1 6.0725 11.5345 -3.0380 42 1 6.0701 13.1031 -1.2364 43 1 6.5588 14.4088 -3.7382 44 1 8.8502 13.9071 -3.0924 45 1 7.1037 1.3242 -1.1820 46 1 6.5873 2.7290 -2.2110 47 1 2.7321 2.1250 -0.2971 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12335838.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:13 Heat of formation + Delta-G solvation = 82.455720 kcal Electronic energy + Delta-G solvation = -31125.475495 eV Core-core repulsion = 26820.197667 eV Total energy + Delta-G solvation = -4305.277828 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.46381 -41.68114 -40.53539 -39.16117 -37.89160 -37.49815 -37.27434 -34.62879 -33.35233 -32.38484 -32.17352 -30.76823 -30.43806 -26.84585 -26.68878 -26.34722 -25.13923 -24.42017 -23.61614 -22.94298 -21.59260 -20.80408 -20.58312 -19.34279 -19.02853 -18.47461 -18.22297 -17.46938 -17.36482 -17.08981 -16.71039 -16.17693 -15.92483 -15.84848 -15.79861 -15.37390 -15.08257 -15.06777 -15.02212 -14.83031 -14.72670 -14.61855 -14.32615 -14.14510 -14.01779 -13.85898 -13.69452 -13.60423 -13.19518 -13.08116 -12.93437 -12.68278 -12.63536 -12.57190 -12.16663 -11.95147 -11.86148 -11.81342 -11.36132 -10.92495 -10.72558 -10.40571 -10.11068 -10.05304 -9.81792 -9.33402 -8.79711 -5.00645 -0.29173 -0.24667 0.18762 0.40623 1.25476 1.36584 1.53747 1.70752 1.86122 1.90797 1.92145 2.00479 2.19974 2.78087 2.84490 2.92862 3.32206 3.45698 3.53041 3.56834 3.61945 3.71755 3.72384 3.77819 3.83403 3.94935 3.96539 3.99477 4.08439 4.12300 4.24579 4.33639 4.37842 4.48097 4.55018 4.58015 4.59321 4.63599 4.71750 4.77705 4.80889 4.86454 4.92586 4.99897 5.02409 5.18835 5.23180 5.24525 5.38436 5.44174 5.48539 5.58164 5.62161 5.69703 5.99940 6.38592 6.47544 6.49491 6.51616 7.23159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.071 4.071 8 C -0.076 4.076 9 H 0.101 0.899 10 C -0.136 4.136 11 C 0.120 3.880 12 H 0.108 0.892 13 N -0.710 5.710 14 C 0.568 3.432 15 O -0.536 6.536 16 C -0.123 4.123 17 C -0.113 4.113 18 C -0.072 4.072 19 C -0.062 4.062 20 C 0.082 3.918 21 C -0.054 4.054 22 N -0.583 5.583 23 C 0.080 3.920 24 C -0.164 4.164 25 C -0.038 4.038 26 O -0.537 6.537 27 Si 0.680 3.320 28 C -0.144 4.144 29 C -0.067 4.067 30 H 0.133 0.867 31 H 0.135 0.865 32 H 0.132 0.868 33 H 0.079 0.921 34 H 0.100 0.900 35 H 0.402 0.598 36 H 0.125 0.875 37 H 0.129 0.871 38 H 0.137 0.863 39 H 0.423 0.577 40 H 0.177 0.823 41 H 0.073 0.927 42 H 0.377 0.623 43 H -0.260 1.260 44 H -0.255 1.255 45 H 0.097 0.903 46 H 0.077 0.923 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.782 1.860 -2.498 4.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.088 5.088 2 C -0.065 4.065 3 C -0.029 4.029 4 C -0.095 4.095 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.071 4.071 8 C -0.094 4.094 9 H 0.119 0.881 10 C -0.174 4.174 11 C 0.014 3.986 12 H 0.126 0.874 13 N -0.362 5.362 14 C 0.356 3.644 15 O -0.413 6.413 16 C -0.128 4.128 17 C -0.133 4.133 18 C -0.090 4.090 19 C -0.067 4.067 20 C -0.024 4.024 21 C -0.075 4.075 22 N -0.185 5.185 23 C -0.049 4.049 24 C -0.172 4.172 25 C -0.148 4.148 26 O -0.344 6.344 27 Si 0.581 3.419 28 C -0.182 4.182 29 C -0.088 4.088 30 H 0.151 0.849 31 H 0.153 0.847 32 H 0.150 0.850 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.238 0.762 36 H 0.143 0.857 37 H 0.147 0.853 38 H 0.154 0.846 39 H 0.261 0.739 40 H 0.194 0.806 41 H 0.091 0.909 42 H 0.224 0.776 43 H -0.184 1.184 44 H -0.179 1.179 45 H 0.115 0.885 46 H 0.096 0.904 47 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.573 1.858 -2.499 4.040 hybrid contribution -0.434 0.503 0.895 1.115 sum 2.139 2.361 -1.603 3.567 Atomic orbital electron populations 1.81310 1.12072 1.06969 1.08408 1.25749 0.92705 0.94082 0.93987 1.15986 0.84286 0.95244 1.07353 1.21236 0.94524 0.96750 0.96946 1.21130 0.93574 0.98716 0.99903 1.21312 1.00684 0.91774 0.96775 1.19595 0.92718 0.95069 0.99728 1.21634 0.95163 0.94789 0.97795 0.88120 1.23450 0.95548 1.02285 0.96117 1.21880 1.00782 0.80430 0.95486 0.87431 1.45552 1.12922 1.11163 1.66515 1.18144 0.83714 0.86021 0.76528 1.90794 1.26736 1.70228 1.53556 1.19384 0.94348 0.93311 1.05708 1.20657 0.96056 0.94954 1.01657 1.20160 0.97798 0.93259 0.97831 1.19171 0.92907 0.93103 1.01522 1.18061 0.90134 0.91299 1.02947 1.20072 0.99344 0.90193 0.97940 1.41692 1.11886 1.08629 1.56326 1.21753 0.92187 0.89492 1.01437 1.19498 0.93914 0.93000 1.10742 1.24008 0.99392 1.01707 0.89699 1.86641 1.63531 1.57876 1.26331 0.95235 0.81011 0.78000 0.87647 1.23616 0.94916 1.00586 0.99122 1.21080 0.93669 0.96755 0.97263 0.84932 0.84695 0.84981 0.90267 0.88124 0.76229 0.85705 0.85346 0.84554 0.73924 0.80634 0.90917 0.77569 1.18448 1.17922 0.88482 0.90424 0.85018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.04 18.54 41.84 0.78 -1.26 16 2 C 0.25 0.51 15.33 -22.47 -0.34 0.17 16 3 C -0.03 0.01 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.33 10.03 -39.64 -0.40 -0.07 16 6 C -0.09 0.26 8.61 -39.49 -0.34 -0.08 16 7 C -0.07 0.19 5.28 -104.68 -0.55 -0.37 16 8 C -0.08 0.27 3.85 -90.96 -0.35 -0.08 16 9 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 10 C -0.14 0.48 7.29 -25.92 -0.19 0.29 16 11 C 0.12 -0.20 4.33 -67.02 -0.29 -0.50 16 12 H 0.11 0.00 7.47 -51.93 -0.39 -0.39 16 13 N -0.71 0.80 5.21 -53.95 -0.28 0.52 16 14 C 0.57 1.19 7.76 -12.45 -0.10 1.10 16 15 O -0.54 -3.02 15.91 5.29 0.08 -2.93 16 16 C -0.12 -0.18 5.87 -104.95 -0.62 -0.79 16 17 C -0.11 0.03 9.46 -39.57 -0.37 -0.35 16 18 C -0.07 -0.05 10.03 -39.69 -0.40 -0.45 16 19 C -0.06 -0.12 6.35 -105.04 -0.67 -0.78 16 20 C 0.08 0.12 7.26 -84.00 -0.61 -0.49 16 21 C -0.05 -0.10 9.61 -39.03 -0.37 -0.47 16 22 N -0.58 0.52 6.07 -10.68 -0.06 0.45 16 23 C 0.08 -0.07 10.43 -16.78 -0.17 -0.24 16 24 C -0.16 -0.14 5.60 -102.74 -0.58 -0.71 16 25 C -0.04 0.02 3.05 36.00 0.11 0.13 16 26 O -0.54 -0.49 12.86 -35.23 -0.45 -0.94 16 27 Si 0.68 -1.34 30.79 -169.99 -5.23 -6.57 16 28 C -0.14 0.38 7.26 -25.82 -0.19 0.19 16 29 C -0.07 0.12 9.41 -39.17 -0.37 -0.25 16 30 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 31 H 0.14 -0.62 8.06 -52.48 -0.42 -1.05 16 32 H 0.13 -0.60 6.65 -52.48 -0.35 -0.95 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.10 -0.39 7.72 -51.93 -0.40 -0.79 16 35 H 0.40 -1.40 6.69 -40.82 -0.27 -1.68 16 36 H 0.13 -0.40 6.36 -52.48 -0.33 -0.74 16 37 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 38 H 0.14 0.21 7.62 -52.48 -0.40 -0.19 16 39 H 0.42 -1.59 8.96 -40.82 -0.37 -1.96 16 40 H 0.18 -0.62 6.30 -52.49 -0.33 -0.95 16 41 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 42 H 0.38 -1.16 8.74 45.56 0.40 -0.76 16 43 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 44 H -0.25 -0.14 7.04 56.52 0.40 0.25 16 45 H 0.10 -0.32 6.31 -51.93 -0.33 -0.65 16 46 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 47 H 0.13 -0.38 8.05 -52.49 -0.42 -0.81 16 LS Contribution 403.22 15.07 6.08 6.08 Total: 0.00 -11.37 403.22 -12.23 -23.60 By element: Atomic # 1 Polarization: -8.99 SS G_CDS: -5.34 Total: -14.33 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -7.79 Total: -4.61 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: 0.43 Total: -0.29 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.37 Total: -3.88 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.23 Total: -6.57 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.37 -12.23 -23.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12335838.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.056 kcal (2) G-P(sol) polarization free energy of solvation -11.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.600 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds