Wall clock time and date at job start Tue Mar 9 2021 12:51:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39610 * 120.15111 * 351.80346 * 3 2 1 5 5 C 1.37965 * 119.84524 * 179.97438 * 4 3 2 6 6 C 1.38342 * 120.15122 * 0.02562 * 5 4 3 7 7 C 1.38382 * 120.30611 * 359.97438 * 6 5 4 8 8 C 1.50698 * 119.92681 * 179.97438 * 7 6 5 9 9 H 1.08997 * 112.85417 * 168.80191 * 8 7 6 10 10 C 1.53781 * 113.61342 * 299.99843 * 8 7 6 11 11 C 1.53786 * 87.17350 * 140.02323 * 10 8 7 12 12 H 1.09000 * 113.61138 * 220.06261 * 11 10 8 13 13 N 1.46496 * 113.61518 * 89.15486 * 11 10 8 14 14 C 1.34779 * 119.99390 * 154.99856 * 13 11 10 15 15 O 1.21585 * 120.00488 * 0.02562 * 14 13 11 16 16 C 1.47583 * 119.99647 * 180.02562 * 14 13 11 17 17 C 1.40204 * 119.83123 * 359.73166 * 16 14 13 18 18 C 1.36226 * 120.37649 * 179.73570 * 17 16 14 19 19 C 1.39873 * 119.96420 * 0.55439 * 18 17 16 20 20 C 1.40934 * 120.16405 * 359.69943 * 19 18 17 21 21 C 1.38652 * 119.48758 * 0.02562 * 20 19 18 22 22 N 1.37821 * 107.12879 * 180.02562 * 20 19 18 23 23 C 1.36569 * 109.86363 * 0.02562 * 22 20 19 24 24 C 1.34456 * 109.98153 * 0.02562 * 23 22 20 25 25 C 1.50696 * 126.48170 * 179.97438 * 24 23 22 26 26 O 1.42898 * 109.47068 * 255.01798 * 25 24 23 27 27 Si 1.86293 * 109.47211 * 15.02195 * 25 24 23 28 28 C 1.53782 * 113.68885 * 37.53412 * 8 7 6 29 29 C 1.37929 * 120.14964 * 0.25304 * 7 6 5 30 30 H 1.08003 * 120.07726 * 0.02579 * 4 3 2 31 31 H 1.08004 * 119.92764 * 179.97438 * 5 4 3 32 32 H 1.08004 * 119.84834 * 180.02562 * 6 5 4 33 33 H 1.09002 * 113.61445 * 254.61323 * 10 8 7 34 34 H 1.09002 * 113.61408 * 25.43053 * 10 8 7 35 35 H 0.97001 * 120.00117 * 335.00621 * 13 11 10 36 36 H 1.08004 * 119.81145 * 359.97438 * 17 16 14 37 37 H 1.08005 * 120.01846 * 180.23114 * 18 17 16 38 38 H 1.08006 * 120.16232 * 180.02562 * 21 20 19 39 39 H 0.96994 * 125.07151 * 179.97438 * 22 20 19 40 40 H 1.07995 * 125.00876 * 180.02562 * 23 22 20 41 41 H 1.09002 * 109.47224 * 135.02361 * 25 24 23 42 42 H 0.96704 * 114.00189 * 179.97438 * 26 25 24 43 43 H 1.48506 * 110.00155 * 178.68378 * 27 25 24 44 44 H 1.48502 * 110.00246 * 299.99966 * 27 25 24 45 45 H 1.08997 * 113.61668 * 334.55405 * 28 8 7 46 46 H 1.08998 * 113.61674 * 105.37914 * 28 8 7 47 47 H 1.07997 * 120.07817 * 179.74848 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2698 -1.1939 0.1721 5 6 4.6495 -1.1861 0.1705 6 6 5.3374 0.0019 -0.0005 7 6 4.6481 1.1896 -0.1717 8 6 5.4062 2.4788 -0.3567 9 1 4.7676 3.3037 -0.6727 10 6 6.3243 2.8288 0.8262 11 6 7.3569 3.2977 -0.2125 12 1 8.3822 3.0246 0.0369 13 7 7.2166 4.7078 -0.5842 14 6 8.2800 5.3897 -1.0540 15 8 9.3555 4.8345 -1.1698 16 6 8.1390 6.8104 -1.4279 17 6 6.8958 7.4456 -1.2983 18 6 6.7543 8.7580 -1.6351 19 6 7.8506 9.4758 -2.1242 20 6 9.1039 8.8465 -2.2638 21 6 9.2403 7.5119 -1.9132 22 7 9.9783 9.7890 -2.7603 23 6 9.3288 10.9773 -2.9365 24 6 8.0409 10.8557 -2.5700 25 6 6.9916 11.9366 -2.6116 26 8 6.7367 12.4043 -1.2857 27 14 7.5974 13.3500 -3.6631 28 6 6.6825 2.3293 -1.2014 29 6 3.2689 1.1969 -0.1675 30 1 2.7340 -2.1221 0.3053 31 1 5.1937 -2.1094 0.3040 32 1 6.4174 0.0023 -0.0014 33 1 5.9404 3.6329 1.4540 34 1 6.6464 1.9603 1.4008 35 1 6.3585 5.1506 -0.4921 36 1 6.0464 6.8923 -0.9257 37 1 5.7949 9.2425 -1.5294 38 1 10.1959 7.0189 -2.0154 39 1 10.9155 9.6320 -2.9549 40 1 9.7828 11.8814 -3.3144 41 1 6.0725 11.5345 -3.0380 42 1 6.0701 13.1031 -1.2364 43 1 6.5588 14.4088 -3.7382 44 1 8.8502 13.9071 -3.0924 45 1 7.1037 1.3242 -1.1820 46 1 6.5873 2.7290 -2.2110 47 1 2.7321 2.1250 -0.2971 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_12335838.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:12 Heat of formation + Delta-G solvation = 83.480838 kcal Electronic energy + Delta-G solvation = -31125.431042 eV Core-core repulsion = 26820.197667 eV Total energy + Delta-G solvation = -4305.233376 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.44270 -41.56340 -40.51240 -39.09362 -37.87982 -37.52821 -37.40761 -34.63611 -33.34355 -32.21675 -32.04960 -30.76372 -30.41783 -26.62748 -26.59250 -26.22416 -25.04774 -24.36923 -23.62086 -22.76079 -21.61387 -20.73230 -20.54203 -19.30527 -18.91942 -18.43262 -18.19110 -17.30162 -17.27609 -17.06201 -16.60254 -16.17304 -15.86088 -15.80214 -15.74663 -15.33640 -15.14512 -15.01976 -14.95957 -14.76991 -14.73955 -14.55287 -14.30549 -14.15142 -13.97828 -13.84439 -13.75715 -13.38113 -13.14687 -12.97433 -12.76250 -12.63916 -12.57065 -12.46030 -12.17115 -11.85790 -11.72852 -11.64014 -11.18032 -11.08351 -10.75533 -10.32506 -10.09284 -9.88808 -9.63821 -9.34227 -8.78241 -4.84823 -0.30104 -0.17059 0.39446 0.40262 1.36457 1.40316 1.57677 1.65887 1.89419 1.92693 1.92815 2.01957 2.26879 2.84353 2.87249 2.89094 3.52782 3.57265 3.62342 3.73477 3.74093 3.79669 3.85963 3.96474 4.04234 4.06305 4.12367 4.21463 4.22773 4.31008 4.35190 4.39302 4.53123 4.54322 4.60901 4.72906 4.80357 4.81122 4.87203 4.94592 4.99824 5.03946 5.08669 5.12517 5.21821 5.25308 5.37237 5.43349 5.44764 5.50421 5.57539 5.62938 5.71841 5.92029 5.99885 6.41108 6.50608 6.53445 6.71081 7.18190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.277 3.723 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.117 4.117 6 C -0.083 4.083 7 C -0.073 4.073 8 C -0.067 4.067 9 H 0.112 0.888 10 C -0.125 4.125 11 C 0.110 3.890 12 H 0.088 0.912 13 N -0.694 5.694 14 C 0.565 3.435 15 O -0.580 6.580 16 C -0.136 4.136 17 C -0.106 4.106 18 C -0.083 4.083 19 C -0.082 4.082 20 C 0.067 3.933 21 C -0.067 4.067 22 N -0.577 5.577 23 C 0.087 3.913 24 C -0.190 4.190 25 C -0.050 4.050 26 O -0.562 6.562 27 Si 0.768 3.232 28 C -0.141 4.141 29 C -0.067 4.067 30 H 0.139 0.861 31 H 0.155 0.845 32 H 0.150 0.850 33 H 0.085 0.915 34 H 0.108 0.892 35 H 0.415 0.585 36 H 0.155 0.845 37 H 0.141 0.859 38 H 0.129 0.871 39 H 0.434 0.566 40 H 0.202 0.798 41 H 0.084 0.916 42 H 0.391 0.609 43 H -0.291 1.291 44 H -0.287 1.287 45 H 0.105 0.895 46 H 0.067 0.933 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.938 2.025 -2.565 4.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.135 4.135 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.085 4.085 9 H 0.130 0.870 10 C -0.163 4.163 11 C 0.004 3.996 12 H 0.106 0.894 13 N -0.346 5.346 14 C 0.354 3.646 15 O -0.461 6.461 16 C -0.140 4.140 17 C -0.126 4.126 18 C -0.101 4.101 19 C -0.087 4.087 20 C -0.040 4.040 21 C -0.088 4.088 22 N -0.181 5.181 23 C -0.042 4.042 24 C -0.197 4.197 25 C -0.159 4.159 26 O -0.371 6.371 27 Si 0.672 3.328 28 C -0.179 4.179 29 C -0.088 4.088 30 H 0.157 0.843 31 H 0.172 0.828 32 H 0.167 0.833 33 H 0.104 0.896 34 H 0.127 0.873 35 H 0.253 0.747 36 H 0.173 0.827 37 H 0.159 0.841 38 H 0.147 0.853 39 H 0.275 0.725 40 H 0.219 0.781 41 H 0.102 0.898 42 H 0.241 0.759 43 H -0.218 1.218 44 H -0.214 1.214 45 H 0.123 0.877 46 H 0.086 0.914 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.691 1.999 -2.559 4.217 hybrid contribution -0.399 0.465 0.937 1.120 sum 2.292 2.465 -1.622 3.736 Atomic orbital electron populations 1.81318 1.13796 1.08941 1.10963 1.26171 0.93096 0.92312 0.92183 1.16100 0.82857 0.96412 1.09598 1.21407 0.95174 0.96599 0.96506 1.21378 0.93117 0.99678 0.99296 1.21599 1.01664 0.91537 0.95363 1.19675 0.92356 0.95611 0.99718 1.21604 0.94751 0.94799 0.97323 0.87016 1.23416 0.94406 1.02650 0.95808 1.21976 1.00414 0.80140 0.97025 0.89398 1.45464 1.12698 1.11417 1.65024 1.18309 0.83696 0.86317 0.76250 1.90765 1.28483 1.71108 1.55789 1.19478 0.95077 0.93124 1.06319 1.20913 0.96192 0.94815 1.00645 1.20408 0.98170 0.93649 0.97909 1.19560 0.93409 0.93941 1.01800 1.18149 0.90805 0.91432 1.03611 1.20138 0.99430 0.90640 0.98609 1.41759 1.12389 1.08252 1.55654 1.22189 0.91876 0.90008 1.00133 1.19795 0.95001 0.93062 1.11866 1.24298 0.99851 1.02264 0.89438 1.86593 1.64347 1.58758 1.27449 0.94227 0.77506 0.75094 0.85966 1.23610 0.95305 1.00611 0.98394 1.21210 0.94120 0.96679 0.96780 0.84269 0.82758 0.83281 0.89596 0.87327 0.74691 0.82745 0.84092 0.85263 0.72525 0.78108 0.89779 0.75941 1.21788 1.21402 0.87651 0.91434 0.84172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.37 18.54 19.01 0.35 -5.01 16 2 C 0.28 1.35 15.33 88.33 1.35 2.70 16 3 C -0.05 0.07 5.73 -21.36 -0.12 -0.06 16 4 C -0.08 0.33 9.76 22.54 0.22 0.55 16 5 C -0.12 0.86 10.03 22.23 0.22 1.08 16 6 C -0.08 0.65 8.61 22.33 0.19 0.85 16 7 C -0.07 0.50 5.28 -19.90 -0.11 0.39 16 8 C -0.07 0.57 3.85 -11.01 -0.04 0.53 16 9 H 0.11 -1.18 8.09 -2.39 -0.02 -1.20 16 10 C -0.12 1.06 7.29 31.12 0.23 1.28 16 11 C 0.11 -0.40 4.33 45.58 0.20 -0.20 16 12 H 0.09 0.07 7.47 -2.39 -0.02 0.06 16 13 N -0.69 1.66 5.21 -442.86 -2.31 -0.65 16 14 C 0.57 2.95 7.76 86.71 0.67 3.63 16 15 O -0.58 -7.70 15.91 -3.98 -0.06 -7.76 16 16 C -0.14 -0.51 5.87 -20.08 -0.12 -0.63 16 17 C -0.11 0.07 9.46 22.28 0.21 0.28 16 18 C -0.08 -0.12 10.03 22.20 0.22 0.10 16 19 C -0.08 -0.35 6.35 -20.14 -0.13 -0.47 16 20 C 0.07 0.26 7.26 38.96 0.28 0.54 16 21 C -0.07 -0.35 9.61 22.63 0.22 -0.13 16 22 N -0.58 0.84 6.07 -187.71 -1.14 -0.30 16 23 C 0.09 -0.17 10.43 83.09 0.87 0.69 16 24 C -0.19 -0.32 5.60 -18.65 -0.10 -0.42 16 25 C -0.05 0.07 3.05 71.23 0.22 0.29 16 26 O -0.56 -1.04 12.86 -148.98 -1.92 -2.95 16 27 Si 0.77 -3.43 30.79 68.60 2.11 -1.32 16 28 C -0.14 0.85 7.26 31.18 0.23 1.07 16 29 C -0.07 0.30 9.41 22.54 0.21 0.51 16 30 H 0.14 -0.87 8.06 -2.91 -0.02 -0.89 16 31 H 0.15 -1.76 8.06 -2.91 -0.02 -1.78 16 32 H 0.15 -1.70 6.65 -2.91 -0.02 -1.72 16 33 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 34 H 0.11 -1.05 7.72 -2.39 -0.02 -1.06 16 35 H 0.41 -3.36 6.69 -92.71 -0.62 -3.98 16 36 H 0.16 -1.23 6.36 -2.91 -0.02 -1.24 16 37 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 38 H 0.13 0.72 7.62 -2.91 -0.02 0.70 16 39 H 0.43 -3.14 8.96 -92.71 -0.83 -3.97 16 40 H 0.20 -1.63 6.30 -2.91 -0.02 -1.65 16 41 H 0.08 -0.36 7.96 -2.39 -0.02 -0.38 16 42 H 0.39 -2.40 8.74 -74.05 -0.65 -3.04 16 43 H -0.29 -0.18 7.11 99.48 0.71 0.53 16 44 H -0.29 -0.24 7.04 99.48 0.70 0.46 16 45 H 0.11 -0.81 6.31 -2.39 -0.02 -0.83 16 46 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 47 H 0.14 -0.94 8.05 -2.91 -0.02 -0.96 16 Total: 0.00 -28.69 403.22 0.97 -27.72 By element: Atomic # 1 Polarization: -21.33 SS G_CDS: -0.99 Total: -22.32 kcal Atomic # 6 Polarization: 7.67 SS G_CDS: 4.92 Total: 12.59 kcal Atomic # 7 Polarization: -2.87 SS G_CDS: -3.09 Total: -5.96 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -1.98 Total: -10.72 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.11 Total: -1.32 kcal Total: -28.69 0.97 -27.72 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12335838.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.201 kcal (2) G-P(sol) polarization free energy of solvation -28.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.721 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds