Wall clock time and date at job start Tue Mar 9 2021 12:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43209 * 179.97438 * 2 1 4 4 C 1.39604 * 120.15132 * 270.19513 * 3 2 1 5 5 C 1.37968 * 119.84965 * 180.02562 * 4 3 2 6 6 C 1.38343 * 120.14730 * 359.75004 * 5 4 3 7 7 C 1.38393 * 120.30641 * 0.50411 * 6 5 4 8 8 C 1.50698 * 119.92499 * 179.76385 * 7 6 5 9 9 H 1.08995 * 112.84670 * 190.92131 * 8 7 6 10 10 C 1.54056 * 113.69622 * 322.19721 * 8 7 6 11 11 C 1.53785 * 86.98084 * 139.98800 * 10 8 7 12 12 H 1.09005 * 113.60952 * 219.97792 * 11 10 8 13 13 N 1.46505 * 113.61429 * 89.16274 * 11 10 8 14 14 C 1.34776 * 119.99898 * 105.85903 * 13 11 10 15 15 O 1.21550 * 119.99851 * 359.97438 * 14 13 11 16 16 C 1.47846 * 119.99633 * 180.02562 * 14 13 11 17 17 C 1.39538 * 120.14423 * 359.97438 * 16 14 13 18 18 C 1.38071 * 119.84393 * 180.02562 * 17 16 14 19 19 Br 1.89108 * 119.93609 * 179.97438 * 18 17 16 20 20 C 1.38414 * 120.12663 * 0.02562 * 18 17 16 21 21 C 1.38365 * 120.28253 * 359.97438 * 20 18 17 22 22 C 1.50701 * 119.92333 * 179.74542 * 21 20 18 23 23 O 1.42901 * 109.47167 * 244.99993 * 22 21 20 24 24 Si 1.86296 * 109.47208 * 4.99974 * 22 21 20 25 25 C 1.37949 * 120.15661 * 0.02562 * 21 20 18 26 26 C 1.53782 * 87.17686 * 334.56993 * 11 10 8 27 27 C 1.37928 * 120.14810 * 359.49572 * 7 6 5 28 28 H 1.07998 * 120.07589 * 0.05032 * 4 3 2 29 29 H 1.07993 * 119.93028 * 180.02562 * 5 4 3 30 30 H 1.08003 * 119.84894 * 180.25292 * 6 5 4 31 31 H 1.08995 * 113.60992 * 25.48338 * 10 8 7 32 32 H 1.08994 * 113.69288 * 254.50138 * 10 8 7 33 33 H 0.96998 * 119.99968 * 285.85870 * 13 11 10 34 34 H 1.08003 * 120.07569 * 359.97438 * 17 16 14 35 35 H 1.07999 * 119.85911 * 180.02562 * 20 18 17 36 36 H 1.09002 * 109.47193 * 125.00001 * 22 21 20 37 37 H 0.96697 * 114.00112 * 180.02562 * 23 22 21 38 38 H 1.48497 * 110.00139 * 300.00138 * 24 22 21 39 39 H 1.48505 * 109.99909 * 61.31882 * 24 22 21 40 40 H 1.07994 * 120.06517 * 179.97438 * 25 21 20 41 41 H 1.08992 * 113.61335 * 140.02439 * 26 11 10 42 42 H 1.09003 * 113.61258 * 270.93027 * 26 11 10 43 43 H 1.07995 * 120.07448 * 180.22930 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2693 -0.0032 1.2072 5 6 4.6490 -0.0020 1.1999 6 6 5.3374 -0.0023 -0.0001 7 6 4.6487 0.0068 -1.2004 8 6 5.4074 0.0118 -2.5025 9 1 4.7689 0.2090 -3.3635 10 6 6.6849 0.8722 -2.4713 11 6 7.3567 -0.2407 -3.2930 12 1 8.3831 -0.4481 -2.9899 13 7 7.2149 -0.0682 -4.7410 14 6 8.2688 0.3353 -5.4779 15 8 9.3367 0.5565 -4.9412 16 6 8.1254 0.5099 -6.9390 17 6 6.9007 0.2572 -7.5581 18 6 6.7739 0.4218 -8.9231 19 35 5.1155 0.0795 -9.7650 20 6 7.8587 0.8358 -9.6767 21 6 9.0755 1.0877 -9.0682 22 6 10.2528 1.5326 -9.8972 23 8 11.2707 0.5305 -9.8554 24 14 9.7085 1.7917 -11.6600 25 6 9.2152 0.9271 -7.7052 26 6 6.3273 -1.2072 -2.6840 27 6 3.2694 0.0056 -1.2077 28 1 2.7330 -0.0074 2.1446 29 1 5.1927 -0.0053 2.1329 30 1 6.4175 -0.0055 -0.0001 31 1 7.1058 0.9927 -1.4732 32 1 6.5907 1.8156 -3.0090 33 1 6.3626 -0.2444 -5.1692 34 1 6.0542 -0.0670 -6.9710 35 1 7.7546 0.9635 -10.7440 36 1 10.6463 2.4672 -9.4974 37 1 12.0604 0.7505 -10.3682 38 1 9.1698 0.5248 -12.2167 39 1 8.6726 2.8541 -11.7207 40 1 10.1658 1.1238 -7.2319 41 1 5.9447 -1.9411 -3.3931 42 1 6.6507 -1.6540 -1.7438 43 1 2.7332 0.0090 -2.1451 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:34 Heat of formation + Delta-G solvation = 56.245198 kcal Electronic energy + Delta-G solvation = -28481.068640 eV Core-core repulsion = 24312.252046 eV Total energy + Delta-G solvation = -4168.816594 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.041 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.90316 -41.08011 -40.07857 -38.96172 -37.64801 -37.46961 -34.93047 -33.78531 -33.19665 -32.23991 -31.76305 -30.61631 -27.09815 -26.67501 -26.62862 -25.32873 -24.62870 -22.83373 -22.75625 -21.69932 -20.78102 -19.02641 -18.94232 -18.46491 -17.85174 -17.46322 -17.28513 -16.80757 -16.47427 -16.25769 -16.16033 -15.77556 -15.37624 -15.22012 -15.18107 -14.92237 -14.87093 -14.55294 -14.35019 -14.22166 -14.17083 -13.99126 -13.80811 -13.61301 -13.40901 -12.98852 -12.80391 -12.78006 -12.50767 -12.47112 -12.18473 -11.96599 -11.78835 -11.69795 -11.61925 -11.23252 -11.21491 -10.55165 -10.33264 -10.12258 -10.01815 -9.91215 -9.66456 -4.99526 -0.65197 -0.27287 -0.19438 0.26689 0.37293 1.21403 1.42215 1.55298 1.61200 1.87462 1.90087 1.91943 2.36334 2.81951 2.85254 3.10768 3.25366 3.47751 3.60238 3.64072 3.70407 3.75134 3.77221 3.90141 3.93078 3.99851 4.06089 4.18374 4.19503 4.21983 4.32279 4.46585 4.51368 4.60590 4.67733 4.77364 4.81537 4.83764 4.87065 4.98210 4.99800 5.05052 5.08219 5.16868 5.25851 5.34815 5.41780 5.49344 5.66515 5.89727 6.32468 6.38720 6.85800 6.99861 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.276 3.724 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.116 4.116 6 C -0.082 4.082 7 C -0.074 4.074 8 C -0.068 4.068 9 H 0.110 0.890 10 C -0.140 4.140 11 C 0.110 3.890 12 H 0.092 0.908 13 N -0.694 5.694 14 C 0.566 3.434 15 O -0.565 6.565 16 C -0.132 4.132 17 C -0.044 4.044 18 C -0.101 4.101 19 Br -0.030 7.030 20 C -0.083 4.083 21 C -0.084 4.084 22 C -0.080 4.080 23 O -0.562 6.562 24 Si 0.767 3.233 25 C -0.025 4.025 26 C -0.124 4.124 27 C -0.068 4.068 28 H 0.139 0.861 29 H 0.155 0.845 30 H 0.151 0.849 31 H 0.107 0.893 32 H 0.067 0.933 33 H 0.414 0.586 34 H 0.168 0.832 35 H 0.132 0.868 36 H 0.102 0.898 37 H 0.407 0.593 38 H -0.290 1.290 39 H -0.281 1.281 40 H 0.143 0.857 41 H 0.086 0.914 42 H 0.111 0.889 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.965 0.971 -1.254 6.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.134 4.134 6 C -0.101 4.101 7 C -0.074 4.074 8 C -0.087 4.087 9 H 0.128 0.872 10 C -0.179 4.179 11 C 0.005 3.995 12 H 0.110 0.890 13 N -0.345 5.345 14 C 0.354 3.646 15 O -0.444 6.444 16 C -0.136 4.136 17 C -0.065 4.065 18 C -0.180 4.180 19 Br 0.056 6.944 20 C -0.102 4.102 21 C -0.085 4.085 22 C -0.190 4.190 23 O -0.373 6.373 24 Si 0.672 3.328 25 C -0.044 4.044 26 C -0.162 4.162 27 C -0.089 4.089 28 H 0.157 0.843 29 H 0.173 0.827 30 H 0.168 0.832 31 H 0.126 0.874 32 H 0.086 0.914 33 H 0.252 0.748 34 H 0.185 0.815 35 H 0.149 0.851 36 H 0.120 0.880 37 H 0.259 0.741 38 H -0.217 1.217 39 H -0.208 1.208 40 H 0.161 0.839 41 H 0.105 0.895 42 H 0.129 0.871 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.215 0.673 -1.358 3.555 hybrid contribution -0.134 0.000 0.413 0.434 sum 3.082 0.673 -0.945 3.293 Atomic orbital electron populations 1.81319 1.13813 1.10991 1.08892 1.26186 0.93117 0.92193 0.92324 1.16104 0.82841 1.09874 0.96160 1.21411 0.95218 0.96465 0.96564 1.21388 0.93081 0.99221 0.99738 1.21604 1.01698 0.95395 0.91380 1.19670 0.92311 0.99881 0.95546 1.21673 0.94791 0.97278 0.94918 0.87179 1.23633 0.95228 0.97510 1.01508 1.21991 1.00722 0.98023 0.78760 0.88999 1.45503 1.13424 1.67598 1.08003 1.18136 0.83905 0.76428 0.86180 1.90800 1.28399 1.51823 1.73412 1.19976 0.94835 1.05394 0.93413 1.21477 0.97418 0.95070 0.92486 1.21709 0.93339 1.07400 0.95564 1.96839 1.22930 1.94558 1.80103 1.21225 0.92447 0.96925 0.99642 1.19607 0.94153 1.00681 0.94075 1.24822 0.89844 0.94390 1.09966 1.86441 1.30185 1.44192 1.76459 0.94103 0.84674 0.77568 0.76448 1.21336 0.98624 0.91945 0.92521 1.23420 0.94273 0.95962 1.02549 1.21205 0.94169 0.96853 0.96655 0.84271 0.82688 0.83152 0.87429 0.91439 0.74827 0.81480 0.85109 0.88032 0.74147 1.21703 1.20818 0.83933 0.89513 0.87074 0.84308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.39 18.54 19.01 0.35 -5.04 16 2 C 0.28 1.34 15.33 88.33 1.35 2.70 16 3 C -0.05 0.07 5.73 -21.36 -0.12 -0.05 16 4 C -0.08 0.35 9.76 22.54 0.22 0.57 16 5 C -0.12 0.91 10.03 22.23 0.22 1.13 16 6 C -0.08 0.70 8.59 22.33 0.19 0.89 16 7 C -0.07 0.54 5.29 -19.90 -0.11 0.43 16 8 C -0.07 0.64 3.86 -10.92 -0.04 0.60 16 9 H 0.11 -1.22 8.09 -2.39 -0.02 -1.24 16 10 C -0.14 1.00 7.27 31.22 0.23 1.23 16 11 C 0.11 -0.57 4.29 45.52 0.20 -0.38 16 12 H 0.09 -0.10 7.50 -2.38 -0.02 -0.12 16 13 N -0.69 2.78 5.21 -442.88 -2.31 0.47 16 14 C 0.57 1.84 7.77 86.79 0.67 2.51 16 15 O -0.56 -6.28 15.97 -3.87 -0.06 -6.34 16 16 C -0.13 -0.28 5.87 -20.09 -0.12 -0.40 16 17 C -0.04 0.06 9.28 22.54 0.21 0.27 16 18 C -0.10 -0.16 6.22 22.27 0.14 -0.03 16 19 Br -0.03 -0.03 33.69 -20.37 -0.69 -0.72 16 20 C -0.08 -0.28 8.41 22.34 0.19 -0.09 16 21 C -0.08 -0.25 5.38 -19.90 -0.11 -0.35 16 22 C -0.08 0.17 2.79 71.24 0.20 0.37 16 23 O -0.56 0.81 12.80 -148.98 -1.91 -1.10 16 24 Si 0.77 -2.73 29.84 68.60 2.05 -0.68 16 25 C -0.02 -0.10 9.22 22.53 0.21 0.11 16 26 C -0.12 1.20 7.29 31.12 0.23 1.42 16 27 C -0.07 0.32 9.41 22.54 0.21 0.53 16 28 H 0.14 -0.90 8.06 -2.91 -0.02 -0.92 16 29 H 0.16 -1.84 8.06 -2.91 -0.02 -1.87 16 30 H 0.15 -1.85 6.67 -2.91 -0.02 -1.87 16 31 H 0.11 -0.95 6.33 -2.39 -0.02 -0.97 16 32 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 33 H 0.41 -3.92 6.74 -92.71 -0.62 -4.55 16 34 H 0.17 -1.34 6.40 -2.91 -0.02 -1.36 16 35 H 0.13 0.42 4.85 -2.91 -0.01 0.41 16 36 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 37 H 0.41 -4.87 8.74 -74.06 -0.65 -5.52 16 38 H -0.29 -1.02 7.05 99.48 0.70 -0.32 16 39 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 40 H 0.14 0.73 7.65 -2.91 -0.02 0.71 16 41 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 42 H 0.11 -1.21 7.71 -2.39 -0.02 -1.23 16 43 H 0.14 -0.93 8.05 -2.91 -0.02 -0.95 16 Total: 0.00 -24.59 391.10 1.27 -23.32 By element: Atomic # 1 Polarization: -21.25 SS G_CDS: -0.14 Total: -21.39 kcal Atomic # 6 Polarization: 7.50 SS G_CDS: 3.97 Total: 11.47 kcal Atomic # 7 Polarization: -2.61 SS G_CDS: -1.96 Total: -4.57 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -1.97 Total: -7.44 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: 2.05 Total: -0.68 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.72 kcal Total: -24.59 1.27 -23.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.566 kcal (2) G-P(sol) polarization free energy of solvation -24.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.320 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds